EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000020138 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5495 bases
Position: chrNHOQ01000466.1:869232-874726
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000029874	La	PF05383.17	8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000030178	-	1197	-	ENSGAFP00000029874	398 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020138's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000020138	-	84	31.250	ENSGAFG00000009426	larp6a	60	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020138	-	89	53.611	ENSAPOG00000003568	-	94	53.611	Acanthochromis_polyacanthus
ENSGAFG00000020138	-	88	53.315	ENSACIG00000008349	-	83	53.315	Amphilophus_citrinellus
ENSGAFG00000020138	-	89	55.556	ENSAOCG00000004646	larp6b	93	55.556	Amphiprion_ocellaris
ENSGAFG00000020138	-	89	55.827	ENSAPEG00000022748	-	92	55.827	Amphiprion_percula
ENSGAFG00000020138	-	89	55.285	ENSATEG00000021222	-	92	55.285	Anabas_testudineus
ENSGAFG00000020138	-	87	53.333	ENSACLG00000009988	larp6b	90	53.333	Astatotilapia_calliptera
ENSGAFG00000020138	-	51	30.049	ENSCING00000018361	-	68	30.049	Ciona_intestinalis
ENSGAFG00000020138	-	88	70.170	ENSCVAG00000012145	-	90	70.170	Cyprinodon_variegatus
ENSGAFG00000020138	-	90	81.006	ENSFHEG00000010409	-	84	81.006	Fundulus_heteroclitus
ENSGAFG00000020138	-	87	53.056	ENSHBUG00000012344	larp6b	89	53.056	Haplochromis_burtoni
ENSGAFG00000020138	-	51	47.115	ENSIPUG00000007609	larp6b	85	33.907	Ictalurus_punctatus
ENSGAFG00000020138	-	86	54.674	ENSLBEG00000016460	-	96	54.674	Labrus_bergylta
ENSGAFG00000020138	-	88	57.143	ENSMAMG00000005509	-	90	57.143	Mastacembelus_armatus
ENSGAFG00000020138	-	87	53.056	ENSMZEG00005024390	larp6b	90	53.056	Maylandia_zebra
ENSGAFG00000020138	-	89	52.304	ENSNBRG00000012748	larp6b	92	52.304	Neolamprologus_brichardi
ENSGAFG00000020138	-	89	96.893	ENSPLAG00000005133	-	97	96.893	Poecilia_latipinna
ENSGAFG00000020138	-	89	97.175	ENSPMEG00000019947	-	99	97.175	Poecilia_mexicana
ENSGAFG00000020138	-	94	93.369	ENSPREG00000011853	-	93	93.369	Poecilia_reticulata
ENSGAFG00000020138	-	88	52.316	ENSPNYG00000007025	larp6b	88	52.316	Pundamilia_nyererei
ENSGAFG00000020138	-	83	35.802	ENSPNAG00000023854	larp6b	84	35.802	Pygocentrus_nattereri
ENSGAFG00000020138	-	65	63.258	ENSSDUG00000009842	-	80	63.258	Seriola_dumerili
ENSGAFG00000020138	-	84	57.307	ENSSLDG00000017081	-	80	57.307	Seriola_lalandi_dorsalis
ENSGAFG00000020138	-	87	56.873	ENSSPAG00000014320	-	89	57.412	Stegastes_partitus
ENSGAFG00000020138	-	90	97.486	ENSXCOG00000018917	-	94	97.486	Xiphophorus_couchianus
ENSGAFG00000020138	-	90	97.486	ENSXMAG00000025734	-	95	97.486	Xiphophorus_maculatus