EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000020231 (Gene tree)
Gene ID: -
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 22228 bases
Position: chrNHOQ01002164.1:2070826-2093053
Accession: ZDB-GENE-050522-431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000030021	Ribonuc_2-5A	PF06479.12	3.5e-40	1	1
ENSGAFP00000030023	Ribonuc_2-5A	PF06479.12	4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000030327	-	4446	-	ENSGAFP00000030023	1060 (aa)	-	-
ENSGAFT00000030325	-	2931	-	ENSGAFP00000030021	976 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020231	ern1	96	88.596	ENSAPOG00000009999	ern1	95	88.596	Acanthochromis_polyacanthus
ENSGAFG00000020231	ern1	94	89.625	ENSACIG00000021716	ern1	93	89.625	Amphilophus_citrinellus
ENSGAFG00000020231	ern1	95	89.774	ENSAOCG00000012309	ern1	94	89.774	Amphiprion_ocellaris
ENSGAFG00000020231	ern1	96	88.287	ENSAPEG00000011263	ern1	98	92.324	Amphiprion_percula
ENSGAFG00000020231	ern1	99	85.206	ENSATEG00000024468	ern1	98	85.206	Anabas_testudineus
ENSGAFG00000020231	ern1	99	86.679	ENSACLG00000027919	ern1	98	86.679	Astatotilapia_calliptera
ENSGAFG00000020231	ern1	94	82.521	ENSAMXG00000000944	ern1	93	83.556	Astyanax_mexicanus
ENSGAFG00000020231	ern1	95	85.833	ENSCSEG00000014500	ern1	99	85.546	Cynoglossus_semilaevis
ENSGAFG00000020231	ern1	100	91.463	ENSCVAG00000002988	ern1	100	91.463	Cyprinodon_variegatus
ENSGAFG00000020231	ern1	94	79.810	ENSDARG00000013997	ern1	100	81.328	Danio_rerio
ENSGAFG00000020231	ern1	93	79.747	ENSELUG00000005957	ern1	97	78.355	Esox_lucius
ENSGAFG00000020231	ern1	99	90.490	ENSFHEG00000005578	ern1	99	90.490	Fundulus_heteroclitus
ENSGAFG00000020231	ern1	93	84.425	ENSGMOG00000011232	ern1	100	86.538	Gadus_morhua
ENSGAFG00000020231	ern1	93	87.273	ENSGACG00000011700	ern1	97	89.681	Gasterosteus_aculeatus
ENSGAFG00000020231	ern1	95	88.993	ENSHBUG00000012581	ern1	97	87.019	Haplochromis_burtoni
ENSGAFG00000020231	ern1	93	85.974	ENSHCOG00000016199	ern1	90	88.355	Hippocampus_comes
ENSGAFG00000020231	ern1	94	82.059	ENSIPUG00000011083	ern1	93	82.819	Ictalurus_punctatus
ENSGAFG00000020231	ern1	99	85.822	ENSKMAG00000019499	ern1	98	85.917	Kryptolebias_marmoratus
ENSGAFG00000020231	ern1	98	81.250	ENSLBEG00000025907	ern1	99	81.250	Labrus_bergylta
ENSGAFG00000020231	ern1	97	86.898	ENSMAMG00000023439	ern1	95	86.994	Mastacembelus_armatus
ENSGAFG00000020231	ern1	99	86.679	ENSMZEG00005003221	ern1	98	86.679	Maylandia_zebra
ENSGAFG00000020231	ern1	97	85.261	ENSMMOG00000007650	ern1	97	88.912	Mola_mola
ENSGAFG00000020231	ern1	94	88.795	ENSMALG00000017775	ern1	89	90.266	Monopterus_albus
ENSGAFG00000020231	ern1	95	89.200	ENSNBRG00000002179	ern1	97	87.694	Neolamprologus_brichardi
ENSGAFG00000020231	ern1	93	88.404	ENSONIG00000017169	ern1	99	90.063	Oreochromis_niloticus
ENSGAFG00000020231	ern1	99	84.358	ENSORLG00000008940	ern1	100	84.358	Oryzias_latipes
ENSGAFG00000020231	ern1	99	84.358	ENSORLG00020018387	ern1	100	84.358	Oryzias_latipes_hni
ENSGAFG00000020231	ern1	99	83.970	ENSORLG00015007946	ern1	100	83.970	Oryzias_latipes_hsok
ENSGAFG00000020231	ern1	99	84.508	ENSOMEG00000011741	ern1	100	84.508	Oryzias_melastigma
ENSGAFG00000020231	ern1	93	81.624	ENSPKIG00000005593	ern1	99	80.972	Paramormyrops_kingsleyae
ENSGAFG00000020231	ern1	94	86.814	ENSPMGG00000020442	ern1	95	87.730	Periophthalmus_magnuspinnatus
ENSGAFG00000020231	ern1	100	97.547	ENSPFOG00000007378	ern1	100	97.547	Poecilia_formosa
ENSGAFG00000020231	ern1	100	97.547	ENSPLAG00000014780	ern1	100	97.547	Poecilia_latipinna
ENSGAFG00000020231	ern1	100	97.642	ENSPMEG00000016324	ern1	100	97.642	Poecilia_mexicana
ENSGAFG00000020231	ern1	100	96.792	ENSPREG00000006286	ern1	100	96.792	Poecilia_reticulata
ENSGAFG00000020231	ern1	99	86.679	ENSPNYG00000017929	ern1	99	89.510	Pundamilia_nyererei
ENSGAFG00000020231	ern1	99	79.905	ENSPNAG00000029447	ern1	99	80.284	Pygocentrus_nattereri
ENSGAFG00000020231	ern1	97	85.496	ENSSMAG00000015042	ern1	96	85.496	Scophthalmus_maximus
ENSGAFG00000020231	ern1	99	86.414	ENSSDUG00000009098	ern1	99	86.414	Seriola_dumerili
ENSGAFG00000020231	ern1	99	86.322	ENSSLDG00000023254	ern1	99	86.322	Seriola_lalandi_dorsalis
ENSGAFG00000020231	ern1	96	88.749	ENSSPAG00000017539	ern1	95	88.749	Stegastes_partitus
ENSGAFG00000020231	ern1	95	85.447	ENSTRUG00000001041	ern1	93	87.838	Takifugu_rubripes
ENSGAFG00000020231	ern1	93	87.834	ENSTNIG00000017990	ern1	99	89.579	Tetraodon_nigroviridis
ENSGAFG00000020231	ern1	95	97.632	ENSXCOG00000010330	ern1	97	98.769	Xiphophorus_couchianus
ENSGAFG00000020231	ern1	100	97.736	ENSXMAG00000001310	ern1	100	97.736	Xiphophorus_maculatus