EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000020245 (Gene tree)
Gene ID: -
Gene Symbol: rbm46
Alias: fe11d09|wu:fe11d09|zgc:153695
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 10568 bases
Position: chrNHOQ01000945.1:378339-388906
Accession: ZDB-GENE-061013-298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000030041	RRM_1	PF00076.22	1.1e-37	1	3
ENSGAFP00000030041	RRM_1	PF00076.22	1.1e-37	2	3
ENSGAFP00000030041	RRM_1	PF00076.22	1.1e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000030346	-	1293	-	ENSGAFP00000030041	430 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000020245	rbm46	66	55.749	ENSGAFG00000007783	syncripl	52	55.052
ENSGAFG00000020245	rbm46	72	66.667	ENSGAFG00000020571	rbm47	80	65.696
ENSGAFG00000020245	rbm46	66	67.018	ENSGAFG00000014868	a1cf	50	67.018

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020245	rbm46	89	81.185	ENSG00000151962	RBM46	83	87.273	Homo_sapiens
ENSGAFG00000020245	rbm46	78	90.000	ENSAPOG00000009209	rbm46	68	90.000	Acanthochromis_polyacanthus
ENSGAFG00000020245	rbm46	89	81.185	ENSAMEG00000013290	RBM46	54	81.185	Ailuropoda_melanoleuca
ENSGAFG00000020245	rbm46	86	71.360	ENSACIG00000014500	rbm46	87	71.122	Amphilophus_citrinellus
ENSGAFG00000020245	rbm46	100	81.586	ENSAOCG00000001892	-	88	82.022	Amphiprion_ocellaris
ENSGAFG00000020245	rbm46	87	91.275	ENSAPEG00000017762	rbm46	98	70.766	Amphiprion_percula
ENSGAFG00000020245	rbm46	89	91.096	ENSATEG00000010775	rbm46	95	68.828	Anabas_testudineus
ENSGAFG00000020245	rbm46	70	77.076	ENSAPLG00000005116	RBM46	64	77.592	Anas_platyrhynchos
ENSGAFG00000020245	rbm46	99	81.185	ENSACAG00000015599	RBM46	56	81.185	Anolis_carolinensis
ENSGAFG00000020245	rbm46	67	80.836	ENSANAG00000029193	RBM46	61	81.119	Aotus_nancymaae
ENSGAFG00000020245	rbm46	99	79.261	ENSACLG00000016153	rbm46	81	79.830	Astatotilapia_calliptera
ENSGAFG00000020245	rbm46	75	76.708	ENSAMXG00000009397	rbm46	73	76.708	Astyanax_mexicanus
ENSGAFG00000020245	rbm46	97	70.141	ENSAMXG00000020892	-	67	70.141	Astyanax_mexicanus
ENSGAFG00000020245	rbm46	67	81.533	ENSBTAG00000001696	RBM46	59	81.533	Bos_taurus
ENSGAFG00000020245	rbm46	99	81.185	ENSCJAG00000001768	RBM46	87	81.469	Callithrix_jacchus
ENSGAFG00000020245	rbm46	89	81.185	ENSCAFG00000008473	RBM46	59	81.185	Canis_familiaris
ENSGAFG00000020245	rbm46	89	81.185	ENSCAFG00020002468	RBM46	58	81.185	Canis_lupus_dingo
ENSGAFG00000020245	rbm46	89	81.185	ENSCHIG00000000502	RBM46	59	81.185	Capra_hircus
ENSGAFG00000020245	rbm46	67	80.836	ENSTSYG00000010435	RBM46	61	81.119	Carlito_syrichta
ENSGAFG00000020245	rbm46	67	80.139	ENSCAPG00000011928	-	59	80.139	Cavia_aperea
ENSGAFG00000020245	rbm46	67	79.443	ENSCAPG00000011841	-	76	80.000	Cavia_aperea
ENSGAFG00000020245	rbm46	67	80.836	ENSCPOG00000020396	-	57	80.836	Cavia_porcellus
ENSGAFG00000020245	rbm46	89	80.139	ENSCPOG00000010284	-	61	80.702	Cavia_porcellus
ENSGAFG00000020245	rbm46	89	78.049	ENSCPOG00000019272	-	53	78.596	Cavia_porcellus
ENSGAFG00000020245	rbm46	89	81.185	ENSCCAG00000027619	-	83	81.754	Cebus_capucinus
ENSGAFG00000020245	rbm46	89	63.066	ENSCCAG00000001323	-	55	62.718	Cebus_capucinus
ENSGAFG00000020245	rbm46	77	81.185	ENSCATG00000040148	RBM46	95	81.185	Cercocebus_atys
ENSGAFG00000020245	rbm46	89	80.139	ENSCLAG00000005846	-	61	80.702	Chinchilla_lanigera
ENSGAFG00000020245	rbm46	67	80.139	ENSCLAG00000011886	-	55	80.139	Chinchilla_lanigera
ENSGAFG00000020245	rbm46	89	81.185	ENSCSAG00000003263	RBM46	54	81.469	Chlorocebus_sabaeus
ENSGAFG00000020245	rbm46	89	81.185	ENSCHOG00000003429	RBM46	54	81.754	Choloepus_hoffmanni
ENSGAFG00000020245	rbm46	67	80.139	ENSCPBG00000009314	RBM46	62	80.702	Chrysemys_picta_bellii
ENSGAFG00000020245	rbm46	77	81.185	ENSCANG00000039065	RBM46	95	81.185	Colobus_angolensis_palliatus
ENSGAFG00000020245	rbm46	89	81.185	ENSCGRG00001016714	Rbm46	61	81.469	Cricetulus_griseus_chok1gshd
ENSGAFG00000020245	rbm46	89	81.185	ENSCGRG00000011738	Rbm46	61	81.469	Cricetulus_griseus_crigri
ENSGAFG00000020245	rbm46	92	73.616	ENSCSEG00000005530	rbm46	71	77.778	Cynoglossus_semilaevis
ENSGAFG00000020245	rbm46	88	69.213	ENSCVAG00000021013	rbm46	92	70.670	Cyprinodon_variegatus
ENSGAFG00000020245	rbm46	94	79.430	ENSDARG00000079452	rbm46	78	79.683	Danio_rerio
ENSGAFG00000020245	rbm46	89	80.836	ENSDNOG00000016195	RBM46	54	80.836	Dasypus_novemcinctus
ENSGAFG00000020245	rbm46	89	81.185	ENSDORG00000006405	Rbm46	61	81.469	Dipodomys_ordii
ENSGAFG00000020245	rbm46	89	81.185	ENSETEG00000014902	RBM46	54	81.469	Echinops_telfairi
ENSGAFG00000020245	rbm46	89	80.836	ENSEASG00005015821	RBM46	54	80.836	Equus_asinus_asinus
ENSGAFG00000020245	rbm46	67	80.836	ENSECAG00000007649	RBM46	59	80.836	Equus_caballus
ENSGAFG00000020245	rbm46	67	78.746	ENSEEUG00000011824	RBM46	54	79.021	Erinaceus_europaeus
ENSGAFG00000020245	rbm46	71	81.759	ENSELUG00000008166	rbm46	80	81.759	Esox_lucius
ENSGAFG00000020245	rbm46	89	81.185	ENSFCAG00000029812	RBM46	61	81.469	Felis_catus
ENSGAFG00000020245	rbm46	70	76.589	ENSFALG00000013157	RBM46	56	79.649	Ficedula_albicollis
ENSGAFG00000020245	rbm46	89	78.746	ENSFDAG00000019281	-	83	79.021	Fukomys_damarensis
ENSGAFG00000020245	rbm46	67	77.700	ENSFDAG00000006445	-	57	77.700	Fukomys_damarensis
ENSGAFG00000020245	rbm46	64	93.478	ENSFHEG00000013257	rbm46	72	93.680	Fundulus_heteroclitus
ENSGAFG00000020245	rbm46	65	73.665	ENSGALG00000009278	RBM46	60	74.386	Gallus_gallus
ENSGAFG00000020245	rbm46	67	80.139	ENSGAGG00000002019	RBM46	55	80.139	Gopherus_agassizii
ENSGAFG00000020245	rbm46	89	81.185	ENSGGOG00000001876	RBM46	95	81.185	Gorilla_gorilla
ENSGAFG00000020245	rbm46	86	75.315	ENSHBUG00000009609	rbm46	89	74.813	Haplochromis_burtoni
ENSGAFG00000020245	rbm46	67	70.383	ENSHGLG00000010742	-	56	69.338	Heterocephalus_glaber_female
ENSGAFG00000020245	rbm46	69	77.181	ENSHGLG00000002463	-	68	77.181	Heterocephalus_glaber_female
ENSGAFG00000020245	rbm46	67	67.944	ENSHGLG00000002940	-	55	67.944	Heterocephalus_glaber_female
ENSGAFG00000020245	rbm46	67	67.944	ENSHGLG00100018987	-	83	52.998	Heterocephalus_glaber_male
ENSGAFG00000020245	rbm46	67	70.383	ENSHGLG00100004977	-	56	69.338	Heterocephalus_glaber_male
ENSGAFG00000020245	rbm46	69	76.846	ENSHGLG00100012752	-	63	76.846	Heterocephalus_glaber_male
ENSGAFG00000020245	rbm46	73	61.270	ENSHCOG00000012998	rbm46	81	60.897	Hippocampus_comes
ENSGAFG00000020245	rbm46	71	80.130	ENSIPUG00000024038	rbm46	70	73.938	Ictalurus_punctatus
ENSGAFG00000020245	rbm46	89	81.185	ENSSTOG00000007918	RBM46	61	81.469	Ictidomys_tridecemlineatus
ENSGAFG00000020245	rbm46	67	81.185	ENSJJAG00000003902	Rbm46	61	81.469	Jaculus_jaculus
ENSGAFG00000020245	rbm46	100	69.980	ENSKMAG00000015127	rbm46	95	70.385	Kryptolebias_marmoratus
ENSGAFG00000020245	rbm46	99	80.756	ENSLACG00000002062	RBM46	54	80.756	Latimeria_chalumnae
ENSGAFG00000020245	rbm46	91	80.464	ENSLOCG00000008298	rbm46	74	80.464	Lepisosteus_oculatus
ENSGAFG00000020245	rbm46	67	81.185	ENSLAFG00000015448	RBM46	61	81.469	Loxodonta_africana
ENSGAFG00000020245	rbm46	77	81.185	ENSMFAG00000043485	RBM46	95	81.185	Macaca_fascicularis
ENSGAFG00000020245	rbm46	67	81.185	ENSMMUG00000021147	RBM46	59	81.185	Macaca_mulatta
ENSGAFG00000020245	rbm46	77	81.185	ENSMNEG00000002787	RBM46	95	81.185	Macaca_nemestrina
ENSGAFG00000020245	rbm46	77	81.185	ENSMLEG00000029756	RBM46	95	81.469	Mandrillus_leucophaeus
ENSGAFG00000020245	rbm46	94	88.571	ENSMAMG00000009093	rbm46	79	88.571	Mastacembelus_armatus
ENSGAFG00000020245	rbm46	78	88.926	ENSMZEG00005027849	rbm46	92	71.202	Maylandia_zebra
ENSGAFG00000020245	rbm46	65	73.929	ENSMGAG00000001457	RBM46	61	74.386	Meleagris_gallopavo
ENSGAFG00000020245	rbm46	89	81.185	ENSMAUG00000009911	Rbm46	61	81.754	Mesocricetus_auratus
ENSGAFG00000020245	rbm46	89	81.185	ENSMICG00000042747	RBM46	61	81.469	Microcebus_murinus
ENSGAFG00000020245	rbm46	89	81.185	ENSMOCG00000001188	Rbm46	61	81.754	Microtus_ochrogaster
ENSGAFG00000020245	rbm46	89	86.689	ENSMMOG00000011214	rbm46	71	86.689	Mola_mola
ENSGAFG00000020245	rbm46	69	87.584	ENSMALG00000006185	rbm46	65	87.000	Monopterus_albus
ENSGAFG00000020245	rbm46	89	81.185	MGP_CAROLIEiJ_G0025101	Rbm46	61	81.469	Mus_caroli
ENSGAFG00000020245	rbm46	89	81.533	ENSMUSG00000033882	Rbm46	83	81.533	Mus_musculus
ENSGAFG00000020245	rbm46	89	81.185	MGP_PahariEiJ_G0026544	Rbm46	61	81.754	Mus_pahari
ENSGAFG00000020245	rbm46	89	81.533	MGP_SPRETEiJ_G0026043	Rbm46	83	81.533	Mus_spretus
ENSGAFG00000020245	rbm46	67	81.185	ENSMPUG00000005670	RBM46	59	81.185	Mustela_putorius_furo
ENSGAFG00000020245	rbm46	89	80.556	ENSMLUG00000003221	RBM46	54	81.119	Myotis_lucifugus
ENSGAFG00000020245	rbm46	89	81.533	ENSNGAG00000004231	Rbm46	61	81.818	Nannospalax_galili
ENSGAFG00000020245	rbm46	86	73.580	ENSNBRG00000000273	rbm46	85	71.838	Neolamprologus_brichardi
ENSGAFG00000020245	rbm46	67	80.836	ENSNLEG00000006184	RBM46	61	81.119	Nomascus_leucogenys
ENSGAFG00000020245	rbm46	60	79.151	ENSMEUG00000013328	RBM46	61	79.051	Notamacropus_eugenii
ENSGAFG00000020245	rbm46	60	80.000	ENSOPRG00000007136	RBM46	92	81.538	Ochotona_princeps
ENSGAFG00000020245	rbm46	67	80.139	ENSODEG00000018002	-	56	80.139	Octodon_degus
ENSGAFG00000020245	rbm46	99	79.452	ENSODEG00000000735	-	83	79.452	Octodon_degus
ENSGAFG00000020245	rbm46	73	96.296	ENSONIG00000014096	rbm46	96	88.581	Oreochromis_niloticus
ENSGAFG00000020245	rbm46	67	80.488	ENSOANG00000002141	RBM46	59	80.488	Ornithorhynchus_anatinus
ENSGAFG00000020245	rbm46	89	81.185	ENSOCUG00000017859	RBM46	54	81.185	Oryctolagus_cuniculus
ENSGAFG00000020245	rbm46	74	86.254	ENSORLG00000002429	rbm46	80	78.324	Oryzias_latipes
ENSGAFG00000020245	rbm46	79	78.902	ENSORLG00020022154	rbm46	81	79.827	Oryzias_latipes_hni
ENSGAFG00000020245	rbm46	74	86.598	ENSORLG00015020234	rbm46	80	78.632	Oryzias_latipes_hsok
ENSGAFG00000020245	rbm46	79	77.326	ENSOMEG00000022580	rbm46	90	74.271	Oryzias_melastigma
ENSGAFG00000020245	rbm46	89	81.185	ENSOGAG00000005647	RBM46	54	81.185	Otolemur_garnettii
ENSGAFG00000020245	rbm46	89	80.836	ENSOARG00000016406	RBM46	59	80.836	Ovis_aries
ENSGAFG00000020245	rbm46	77	81.185	ENSPPAG00000043236	RBM46	95	81.185	Pan_paniscus
ENSGAFG00000020245	rbm46	89	81.185	ENSPPRG00000009416	RBM46	61	81.469	Panthera_pardus
ENSGAFG00000020245	rbm46	89	81.185	ENSPTIG00000017449	RBM46	61	81.469	Panthera_tigris_altaica
ENSGAFG00000020245	rbm46	77	81.185	ENSPTRG00000016538	RBM46	95	81.185	Pan_troglodytes
ENSGAFG00000020245	rbm46	89	81.185	ENSPANG00000004186	RBM46	95	81.185	Papio_anubis
ENSGAFG00000020245	rbm46	98	74.041	ENSPKIG00000015334	rbm46	59	74.041	Paramormyrops_kingsleyae
ENSGAFG00000020245	rbm46	67	80.139	ENSPSIG00000006429	RBM46	59	80.139	Pelodiscus_sinensis
ENSGAFG00000020245	rbm46	87	70.663	ENSPMGG00000019872	rbm46	93	70.663	Periophthalmus_magnuspinnatus
ENSGAFG00000020245	rbm46	89	81.185	ENSPEMG00000013899	Rbm46	61	81.469	Peromyscus_maniculatus_bairdii
ENSGAFG00000020245	rbm46	89	81.185	ENSPCIG00000029626	RBM46	59	81.185	Phascolarctos_cinereus
ENSGAFG00000020245	rbm46	86	100.000	ENSPFOG00000001079	rbm46	68	100.000	Poecilia_formosa
ENSGAFG00000020245	rbm46	100	75.096	ENSPLAG00000004541	rbm46	93	75.096	Poecilia_latipinna
ENSGAFG00000020245	rbm46	100	75.287	ENSPMEG00000015724	rbm46	92	84.434	Poecilia_mexicana
ENSGAFG00000020245	rbm46	78	99.703	ENSPREG00000014464	rbm46	71	100.000	Poecilia_reticulata
ENSGAFG00000020245	rbm46	89	81.185	ENSPPYG00000015144	RBM46	54	81.469	Pongo_abelii
ENSGAFG00000020245	rbm46	89	75.261	ENSPCAG00000003110	RBM46	53	75.958	Procavia_capensis
ENSGAFG00000020245	rbm46	89	80.488	ENSPCOG00000024347	RBM46	61	80.488	Propithecus_coquereli
ENSGAFG00000020245	rbm46	89	81.185	ENSPVAG00000008376	RBM46	54	81.185	Pteropus_vampyrus
ENSGAFG00000020245	rbm46	96	80.062	ENSPNAG00000025312	rbm46	84	74.859	Pygocentrus_nattereri
ENSGAFG00000020245	rbm46	89	81.185	ENSRNOG00000025823	Rbm46	54	81.185	Rattus_norvegicus
ENSGAFG00000020245	rbm46	77	80.488	ENSRBIG00000032583	RBM46	95	80.488	Rhinopithecus_bieti
ENSGAFG00000020245	rbm46	77	80.488	ENSRROG00000044288	RBM46	95	80.488	Rhinopithecus_roxellana
ENSGAFG00000020245	rbm46	89	81.185	ENSSBOG00000033028	RBM46	83	81.185	Saimiri_boliviensis_boliviensis
ENSGAFG00000020245	rbm46	89	81.185	ENSSHAG00000012596	RBM46	54	81.185	Sarcophilus_harrisii
ENSGAFG00000020245	rbm46	87	81.754	ENSSFOG00015000087	rbm46	65	73.077	Scleropages_formosus
ENSGAFG00000020245	rbm46	86	66.427	ENSSMAG00000017042	rbm46	93	66.906	Scophthalmus_maximus
ENSGAFG00000020245	rbm46	90	79.508	ENSSDUG00000020645	rbm46	67	91.000	Seriola_dumerili
ENSGAFG00000020245	rbm46	89	80.836	ENSSARG00000006520	RBM46	53	81.404	Sorex_araneus
ENSGAFG00000020245	rbm46	67	81.185	ENSSPUG00000004773	-	59	81.754	Sphenodon_punctatus
ENSGAFG00000020245	rbm46	89	80.836	ENSSPUG00000012525	-	53	81.119	Sphenodon_punctatus
ENSGAFG00000020245	rbm46	87	70.238	ENSSPAG00000013697	rbm46	94	70.238	Stegastes_partitus
ENSGAFG00000020245	rbm46	67	81.185	ENSSSCG00000008994	RBM46	59	81.185	Sus_scrofa
ENSGAFG00000020245	rbm46	67	78.397	ENSTGUG00000005307	RBM46	61	78.947	Taeniopygia_guttata
ENSGAFG00000020245	rbm46	88	66.898	ENSTRUG00000004237	rbm46	90	67.213	Takifugu_rubripes
ENSGAFG00000020245	rbm46	85	80.573	ENSTNIG00000008714	rbm46	65	80.573	Tetraodon_nigroviridis
ENSGAFG00000020245	rbm46	89	80.139	ENSTBEG00000013949	RBM46	53	80.702	Tupaia_belangeri
ENSGAFG00000020245	rbm46	90	80.479	ENSTTRG00000001239	RBM46	55	80.479	Tursiops_truncatus
ENSGAFG00000020245	rbm46	89	81.185	ENSUAMG00000026593	RBM46	59	81.185	Ursus_americanus
ENSGAFG00000020245	rbm46	89	81.185	ENSUMAG00000016442	RBM46	59	81.185	Ursus_maritimus
ENSGAFG00000020245	rbm46	89	81.185	ENSVVUG00000024957	RBM46	61	81.469	Vulpes_vulpes
ENSGAFG00000020245	rbm46	71	65.246	ENSXETG00000032067	-	81	67.434	Xenopus_tropicalis
ENSGAFG00000020245	rbm46	71	45.981	ENSXETG00000032344	-	57	46.129	Xenopus_tropicalis
ENSGAFG00000020245	rbm46	71	73.529	ENSXETG00000022412	-	56	73.770	Xenopus_tropicalis
ENSGAFG00000020245	rbm46	81	100.000	ENSXMAG00000008237	rbm46	67	100.000	Xiphophorus_maculatus