EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000020318 (Gene tree)
Gene ID: -
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4257 bases
Position: chrNHOQ01002390.1:3786720-3790976
Accession: ZDB-GENE-040426-779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000030162	FDF	PF09532.10	8.4e-07	1	1
ENSGAFP00000030162	SM-ATX	PF14438.6	3.8e-08	1	1
ENSGAFP00000030162	LSM14	PF12701.7	2.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000030469	-	2297	-	ENSGAFP00000030162	371 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020318's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000020318	lsm14b	58	62.857	ENSGAFG00000013383	lsm14aa	52	63.309
ENSGAFG00000020318	lsm14b	91	38.847	ENSGAFG00000009468	lsm14ab	85	41.470
ENSGAFG00000020318	lsm14b	66	36.538	ENSGAFG00000013723	LSM14B	85	35.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020318	lsm14b	92	47.814	ENSG00000149657	LSM14B	100	44.156	Homo_sapiens
ENSGAFG00000020318	lsm14b	100	72.386	ENSAPOG00000001780	lsm14b	100	72.386	Acanthochromis_polyacanthus
ENSGAFG00000020318	lsm14b	73	67.143	ENSAMEG00000013430	LSM14B	69	67.143	Ailuropoda_melanoleuca
ENSGAFG00000020318	lsm14b	62	34.959	ENSACIG00000003147	LSM14B	87	33.473	Amphilophus_citrinellus
ENSGAFG00000020318	lsm14b	99	65.668	ENSACIG00000012266	lsm14b	99	65.668	Amphilophus_citrinellus
ENSGAFG00000020318	lsm14b	100	72.654	ENSAOCG00000012380	lsm14b	100	72.654	Amphiprion_ocellaris
ENSGAFG00000020318	lsm14b	70	61.268	ENSAOCG00000006667	LSM14B	89	42.938	Amphiprion_ocellaris
ENSGAFG00000020318	lsm14b	100	64.420	ENSAPEG00000023633	lsm14b	100	64.420	Amphiprion_percula
ENSGAFG00000020318	lsm14b	100	66.931	ENSATEG00000016603	lsm14b	100	66.931	Anabas_testudineus
ENSGAFG00000020318	lsm14b	89	40.464	ENSAPLG00000013203	LSM14B	98	41.753	Anas_platyrhynchos
ENSGAFG00000020318	lsm14b	91	46.978	ENSACAG00000016195	LSM14B	89	47.075	Anolis_carolinensis
ENSGAFG00000020318	lsm14b	75	69.231	ENSANAG00000037915	LSM14B	90	48.476	Aotus_nancymaae
ENSGAFG00000020318	lsm14b	100	67.560	ENSACLG00000019663	lsm14b	100	67.560	Astatotilapia_calliptera
ENSGAFG00000020318	lsm14b	90	50.829	ENSAMXG00000002865	lsm14b	90	52.661	Astyanax_mexicanus
ENSGAFG00000020318	lsm14b	75	69.930	ENSBTAG00000021558	LSM14B	69	69.930	Bos_taurus
ENSGAFG00000020318	lsm14b	92	48.787	ENSCJAG00000014434	LSM14B	90	48.361	Callithrix_jacchus
ENSGAFG00000020318	lsm14b	64	66.019	ENSCAFG00000012518	LSM14B	65	66.019	Canis_familiaris
ENSGAFG00000020318	lsm14b	75	69.930	ENSCAFG00020022150	LSM14B	69	69.930	Canis_lupus_dingo
ENSGAFG00000020318	lsm14b	75	69.930	ENSCHIG00000010284	-	100	47.236	Capra_hircus
ENSGAFG00000020318	lsm14b	62	60.417	ENSCHIG00000022681	-	90	33.518	Capra_hircus
ENSGAFG00000020318	lsm14b	81	42.415	ENSTSYG00000031914	LSM14B	79	42.138	Carlito_syrichta
ENSGAFG00000020318	lsm14b	81	42.901	ENSCAPG00000013059	LSM14B	89	43.574	Cavia_aperea
ENSGAFG00000020318	lsm14b	81	43.034	ENSCPOG00000038080	LSM14B	89	42.767	Cavia_porcellus
ENSGAFG00000020318	lsm14b	92	48.634	ENSCCAG00000021267	LSM14B	90	48.199	Cebus_capucinus
ENSGAFG00000020318	lsm14b	63	48.958	ENSCCAG00000024900	-	57	47.423	Cebus_capucinus
ENSGAFG00000020318	lsm14b	74	69.231	ENSCATG00000036006	LSM14B	69	69.231	Cercocebus_atys
ENSGAFG00000020318	lsm14b	81	45.201	ENSCLAG00000003186	LSM14B	89	44.969	Chinchilla_lanigera
ENSGAFG00000020318	lsm14b	74	69.231	ENSCSAG00000015729	LSM14B	69	69.231	Chlorocebus_sabaeus
ENSGAFG00000020318	lsm14b	99	45.412	ENSCPBG00000027065	LSM14B	99	46.353	Chrysemys_picta_bellii
ENSGAFG00000020318	lsm14b	81	43.344	ENSCANG00000036986	LSM14B	89	43.082	Colobus_angolensis_palliatus
ENSGAFG00000020318	lsm14b	92	48.634	ENSCGRG00001018399	Lsm14b	90	48.199	Cricetulus_griseus_chok1gshd
ENSGAFG00000020318	lsm14b	94	43.089	ENSCSEG00000020669	LSM14B	90	44.318	Cynoglossus_semilaevis
ENSGAFG00000020318	lsm14b	100	65.608	ENSCSEG00000004722	lsm14b	100	65.608	Cynoglossus_semilaevis
ENSGAFG00000020318	lsm14b	65	33.597	ENSCVAG00000012433	-	89	32.780	Cyprinodon_variegatus
ENSGAFG00000020318	lsm14b	99	50.895	ENSDARG00000025386	lsm14b	99	50.639	Danio_rerio
ENSGAFG00000020318	lsm14b	81	43.558	ENSDORG00000016683	Lsm14b	88	44.413	Dipodomys_ordii
ENSGAFG00000020318	lsm14b	92	36.986	ENSETEG00000001869	-	89	37.006	Echinops_telfairi
ENSGAFG00000020318	lsm14b	57	30.172	ENSETEG00000011188	-	99	30.612	Echinops_telfairi
ENSGAFG00000020318	lsm14b	61	37.302	ENSEASG00005023218	LSM14B	87	36.437	Equus_asinus_asinus
ENSGAFG00000020318	lsm14b	74	69.930	ENSECAG00000010659	LSM14B	69	69.930	Equus_caballus
ENSGAFG00000020318	lsm14b	55	64.000	ENSEEUG00000007331	LSM14B	79	64.000	Erinaceus_europaeus
ENSGAFG00000020318	lsm14b	98	54.737	ENSELUG00000005780	lsm14b	90	54.728	Esox_lucius
ENSGAFG00000020318	lsm14b	90	44.380	ENSELUG00000016299	LSM14B	99	45.550	Esox_lucius
ENSGAFG00000020318	lsm14b	92	48.634	ENSFCAG00000003248	LSM14B	90	48.199	Felis_catus
ENSGAFG00000020318	lsm14b	77	66.019	ENSFALG00000010618	LSM14B	81	66.019	Ficedula_albicollis
ENSGAFG00000020318	lsm14b	81	44.582	ENSFDAG00000002214	LSM14B	89	44.340	Fukomys_damarensis
ENSGAFG00000020318	lsm14b	100	73.118	ENSFHEG00000006237	lsm14b	100	73.118	Fundulus_heteroclitus
ENSGAFG00000020318	lsm14b	70	44.286	ENSFHEG00000003362	LSM14B	71	44.138	Fundulus_heteroclitus
ENSGAFG00000020318	lsm14b	100	57.105	ENSGMOG00000017115	lsm14b	99	54.856	Gadus_morhua
ENSGAFG00000020318	lsm14b	88	72.464	ENSGALG00000005125	LSM14B	99	48.379	Gallus_gallus
ENSGAFG00000020318	lsm14b	99	64.973	ENSGACG00000009973	lsm14b	99	64.973	Gasterosteus_aculeatus
ENSGAFG00000020318	lsm14b	82	42.857	ENSGGOG00000005630	LSM14B	85	42.593	Gorilla_gorilla
ENSGAFG00000020318	lsm14b	92	48.361	ENSHGLG00000015055	LSM14B	90	47.922	Heterocephalus_glaber_female
ENSGAFG00000020318	lsm14b	81	43.438	ENSHGLG00100015273	LSM14B	89	43.175	Heterocephalus_glaber_male
ENSGAFG00000020318	lsm14b	69	46.008	ENSHCOG00000004867	lsm14b	100	46.008	Hippocampus_comes
ENSGAFG00000020318	lsm14b	94	43.316	ENSHCOG00000018747	LSM14B	90	43.429	Hippocampus_comes
ENSGAFG00000020318	lsm14b	91	51.771	ENSIPUG00000014946	lsm14b	85	54.444	Ictalurus_punctatus
ENSGAFG00000020318	lsm14b	81	44.582	ENSSTOG00000020482	LSM14B	89	44.340	Ictidomys_tridecemlineatus
ENSGAFG00000020318	lsm14b	91	48.333	ENSJJAG00000012728	Lsm14b	89	47.887	Jaculus_jaculus
ENSGAFG00000020318	lsm14b	91	72.271	ENSKMAG00000017524	lsm14b	92	72.271	Kryptolebias_marmoratus
ENSGAFG00000020318	lsm14b	61	73.944	ENSLACG00000003849	LSM14B	66	73.944	Latimeria_chalumnae
ENSGAFG00000020318	lsm14b	99	52.185	ENSLOCG00000003746	lsm14b	99	52.185	Lepisosteus_oculatus
ENSGAFG00000020318	lsm14b	82	43.119	ENSLAFG00000007492	LSM14B	89	42.857	Loxodonta_africana
ENSGAFG00000020318	lsm14b	74	69.231	ENSMFAG00000041479	LSM14B	69	69.231	Macaca_fascicularis
ENSGAFG00000020318	lsm14b	92	47.814	ENSMMUG00000014084	LSM14B	90	47.368	Macaca_mulatta
ENSGAFG00000020318	lsm14b	92	47.814	ENSMNEG00000045573	LSM14B	90	47.368	Macaca_nemestrina
ENSGAFG00000020318	lsm14b	81	43.653	ENSMLEG00000040895	LSM14B	89	43.396	Mandrillus_leucophaeus
ENSGAFG00000020318	lsm14b	94	46.133	ENSMAMG00000024124	LSM14B	89	45.455	Mastacembelus_armatus
ENSGAFG00000020318	lsm14b	100	68.883	ENSMAMG00000020539	lsm14b	100	68.883	Mastacembelus_armatus
ENSGAFG00000020318	lsm14b	91	39.722	ENSMZEG00005026001	LSM14B	93	41.360	Maylandia_zebra
ENSGAFG00000020318	lsm14b	100	67.560	ENSMZEG00005000987	lsm14b	100	67.560	Maylandia_zebra
ENSGAFG00000020318	lsm14b	90	41.779	ENSMGAG00000005300	LSM14B	99	43.127	Meleagris_gallopavo
ENSGAFG00000020318	lsm14b	92	48.087	ENSMAUG00000020700	Lsm14b	90	47.645	Mesocricetus_auratus
ENSGAFG00000020318	lsm14b	74	69.930	ENSMICG00000014675	LSM14B	78	69.930	Microcebus_murinus
ENSGAFG00000020318	lsm14b	92	48.361	ENSMOCG00000020600	Lsm14b	90	47.922	Microtus_ochrogaster
ENSGAFG00000020318	lsm14b	90	45.930	ENSMMOG00000017321	LSM14B	89	45.294	Mola_mola
ENSGAFG00000020318	lsm14b	89	58.840	ENSMMOG00000020042	lsm14b	93	58.840	Mola_mola
ENSGAFG00000020318	lsm14b	51	41.981	ENSMODG00000016690	LSM14B	57	42.857	Monodelphis_domestica
ENSGAFG00000020318	lsm14b	91	42.340	ENSMALG00000022251	LSM14B	89	42.655	Monopterus_albus
ENSGAFG00000020318	lsm14b	100	66.489	ENSMALG00000004783	lsm14b	97	67.287	Monopterus_albus
ENSGAFG00000020318	lsm14b	75	69.930	MGP_CAROLIEiJ_G0024770	Lsm14b	70	69.930	Mus_caroli
ENSGAFG00000020318	lsm14b	92	48.907	ENSMUSG00000039108	Lsm14b	90	48.476	Mus_musculus
ENSGAFG00000020318	lsm14b	75	69.930	MGP_PahariEiJ_G0026214	Lsm14b	70	69.930	Mus_pahari
ENSGAFG00000020318	lsm14b	75	69.930	MGP_SPRETEiJ_G0025693	Lsm14b	70	69.930	Mus_spretus
ENSGAFG00000020318	lsm14b	68	60.833	ENSMPUG00000007584	LSM14B	67	60.833	Mustela_putorius_furo
ENSGAFG00000020318	lsm14b	91	48.747	ENSMLUG00000000304	LSM14B	90	48.747	Myotis_lucifugus
ENSGAFG00000020318	lsm14b	81	43.344	ENSNLEG00000015757	LSM14B	89	43.082	Nomascus_leucogenys
ENSGAFG00000020318	lsm14b	65	70.629	ENSMEUG00000008267	-	79	70.629	Notamacropus_eugenii
ENSGAFG00000020318	lsm14b	92	48.634	ENSODEG00000004099	LSM14B	90	48.199	Octodon_degus
ENSGAFG00000020318	lsm14b	100	68.633	ENSONIG00000020318	lsm14b	100	68.633	Oreochromis_niloticus
ENSGAFG00000020318	lsm14b	75	49.650	ENSOANG00000003370	LSM14B	96	50.000	Ornithorhynchus_anatinus
ENSGAFG00000020318	lsm14b	81	44.308	ENSOCUG00000006279	LSM14B	89	44.062	Oryctolagus_cuniculus
ENSGAFG00000020318	lsm14b	100	69.811	ENSORLG00000013525	lsm14b	100	70.889	Oryzias_latipes
ENSGAFG00000020318	lsm14b	92	41.127	ENSORLG00000028353	LSM14B	90	41.040	Oryzias_latipes
ENSGAFG00000020318	lsm14b	100	69.811	ENSORLG00020020553	lsm14b	100	70.889	Oryzias_latipes_hni
ENSGAFG00000020318	lsm14b	100	69.811	ENSORLG00015016862	lsm14b	100	70.889	Oryzias_latipes_hsok
ENSGAFG00000020318	lsm14b	92	40.845	ENSORLG00015013157	LSM14B	90	40.751	Oryzias_latipes_hsok
ENSGAFG00000020318	lsm14b	100	69.003	ENSOMEG00000023917	lsm14b	100	70.081	Oryzias_melastigma
ENSGAFG00000020318	lsm14b	74	69.930	ENSOGAG00000003915	LSM14B	78	69.930	Otolemur_garnettii
ENSGAFG00000020318	lsm14b	65	62.963	ENSOARG00000014706	LSM14B	66	62.963	Ovis_aries
ENSGAFG00000020318	lsm14b	82	42.857	ENSPPAG00000035799	LSM14B	85	42.593	Pan_paniscus
ENSGAFG00000020318	lsm14b	92	48.634	ENSPPRG00000009197	LSM14B	90	48.199	Panthera_pardus
ENSGAFG00000020318	lsm14b	61	36.948	ENSPTIG00000021518	LSM14B	88	36.066	Panthera_tigris_altaica
ENSGAFG00000020318	lsm14b	92	47.814	ENSPTRG00000013696	LSM14B	90	47.368	Pan_troglodytes
ENSGAFG00000020318	lsm14b	92	48.087	ENSPANG00000011747	LSM14B	90	47.645	Papio_anubis
ENSGAFG00000020318	lsm14b	99	52.468	ENSPKIG00000003275	lsm14b	85	82.609	Paramormyrops_kingsleyae
ENSGAFG00000020318	lsm14b	89	44.598	ENSPSIG00000014762	LSM14B	100	44.875	Pelodiscus_sinensis
ENSGAFG00000020318	lsm14b	91	49.030	ENSPEMG00000017688	Lsm14b	90	48.596	Peromyscus_maniculatus_bairdii
ENSGAFG00000020318	lsm14b	92	49.454	ENSPCIG00000013405	LSM14B	100	49.246	Phascolarctos_cinereus
ENSGAFG00000020318	lsm14b	100	86.828	ENSPFOG00000005631	lsm14b	100	86.828	Poecilia_formosa
ENSGAFG00000020318	lsm14b	89	43.642	ENSPLAG00000005793	LSM14B	89	43.642	Poecilia_latipinna
ENSGAFG00000020318	lsm14b	100	86.828	ENSPLAG00000002449	lsm14b	100	86.828	Poecilia_latipinna
ENSGAFG00000020318	lsm14b	88	43.804	ENSPMEG00000022953	LSM14B	89	45.143	Poecilia_mexicana
ENSGAFG00000020318	lsm14b	100	87.366	ENSPMEG00000000745	lsm14b	100	87.366	Poecilia_mexicana
ENSGAFG00000020318	lsm14b	62	34.874	ENSPREG00000007828	LSM14B	85	35.398	Poecilia_reticulata
ENSGAFG00000020318	lsm14b	65	69.231	ENSPPYG00000011194	LSM14B	90	45.431	Pongo_abelii
ENSGAFG00000020318	lsm14b	92	48.907	ENSPCOG00000013625	LSM14B	100	47.487	Propithecus_coquereli
ENSGAFG00000020318	lsm14b	90	52.793	ENSPNAG00000012777	lsm14b	90	53.955	Pygocentrus_nattereri
ENSGAFG00000020318	lsm14b	75	69.930	ENSRNOG00000054557	Lsm14b	70	69.930	Rattus_norvegicus
ENSGAFG00000020318	lsm14b	63	64.356	ENSRBIG00000033461	LSM14B	88	42.947	Rhinopithecus_bieti
ENSGAFG00000020318	lsm14b	82	44.545	ENSRROG00000042949	LSM14B	81	44.308	Rhinopithecus_roxellana
ENSGAFG00000020318	lsm14b	81	44.272	ENSSBOG00000032820	LSM14B	89	44.025	Saimiri_boliviensis_boliviensis
ENSGAFG00000020318	lsm14b	81	44.172	ENSSHAG00000015528	LSM14B	96	45.251	Sarcophilus_harrisii
ENSGAFG00000020318	lsm14b	90	51.253	ENSSFOG00015004627	lsm14b	91	51.811	Scleropages_formosus
ENSGAFG00000020318	lsm14b	96	43.264	ENSSMAG00000000135	LSM14B	89	43.956	Scophthalmus_maximus
ENSGAFG00000020318	lsm14b	100	68.519	ENSSMAG00000012725	lsm14b	100	68.519	Scophthalmus_maximus
ENSGAFG00000020318	lsm14b	91	47.339	ENSSDUG00000022770	LSM14B	89	46.571	Seriola_dumerili
ENSGAFG00000020318	lsm14b	100	70.479	ENSSDUG00000020977	lsm14b	100	70.479	Seriola_dumerili
ENSGAFG00000020318	lsm14b	62	35.000	ENSSLDG00000011354	-	88	35.124	Seriola_lalandi_dorsalis
ENSGAFG00000020318	lsm14b	73	72.464	ENSSPUG00000014360	LSM14B	72	72.464	Sphenodon_punctatus
ENSGAFG00000020318	lsm14b	100	69.086	ENSSPAG00000020915	lsm14b	100	69.086	Stegastes_partitus
ENSGAFG00000020318	lsm14b	67	33.818	ENSSPAG00000018854	-	97	32.967	Stegastes_partitus
ENSGAFG00000020318	lsm14b	74	69.231	ENSSSCG00000026052	LSM14B	58	69.231	Sus_scrofa
ENSGAFG00000020318	lsm14b	89	44.262	ENSTGUG00000007884	LSM14B	100	43.989	Taeniopygia_guttata
ENSGAFG00000020318	lsm14b	91	44.199	ENSTRUG00000001529	LSM14B	90	44.986	Takifugu_rubripes
ENSGAFG00000020318	lsm14b	100	64.075	ENSTRUG00000011354	lsm14b	100	64.075	Takifugu_rubripes
ENSGAFG00000020318	lsm14b	100	61.168	ENSTNIG00000002445	lsm14b	100	61.168	Tetraodon_nigroviridis
ENSGAFG00000020318	lsm14b	89	42.297	ENSUAMG00000025298	LSM14B	89	42.045	Ursus_americanus
ENSGAFG00000020318	lsm14b	89	42.297	ENSUMAG00000000480	LSM14B	89	42.045	Ursus_maritimus
ENSGAFG00000020318	lsm14b	81	44.479	ENSVVUG00000015920	LSM14B	88	44.237	Vulpes_vulpes
ENSGAFG00000020318	lsm14b	68	73.188	ENSXETG00000001997	lsm14b	99	47.965	Xenopus_tropicalis
ENSGAFG00000020318	lsm14b	100	87.871	ENSXMAG00000010013	lsm14b	100	87.871	Xiphophorus_maculatus