EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000020383 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 7014 bases
Position: chrNHOQ01002169.1:82878-89891
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000030248	ARS2	PF04959.13	4.1e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000030555	-	2862	-	ENSGAFP00000030248	819 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020383's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000020383	-	54	64.130	ENSGAFG00000005423	srrt	52	63.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020383	-	54	61.505	ENSG00000087087	SRRT	98	69.565	Homo_sapiens
ENSGAFG00000020383	-	54	63.793	ENSAPOG00000002304	srrt	54	61.311	Acanthochromis_polyacanthus
ENSGAFG00000020383	-	54	61.688	ENSAMEG00000014506	SRRT	51	61.255	Ailuropoda_melanoleuca
ENSGAFG00000020383	-	94	56.156	ENSACIG00000015795	srrt	92	55.612	Amphilophus_citrinellus
ENSGAFG00000020383	-	93	74.876	ENSAOCG00000009189	-	98	73.460	Amphiprion_ocellaris
ENSGAFG00000020383	-	94	56.620	ENSAOCG00000009693	srrt	92	55.385	Amphiprion_ocellaris
ENSGAFG00000020383	-	93	74.876	ENSAPEG00000020016	-	98	73.460	Amphiprion_percula
ENSGAFG00000020383	-	94	57.305	ENSAPEG00000003646	srrt	92	55.128	Amphiprion_percula
ENSGAFG00000020383	-	94	56.116	ENSATEG00000014425	srrt	81	63.991	Anabas_testudineus
ENSGAFG00000020383	-	60	79.183	ENSATEG00000003652	-	86	82.237	Anabas_testudineus
ENSGAFG00000020383	-	54	60.304	ENSACAG00000001014	SRRT	93	52.323	Anolis_carolinensis
ENSGAFG00000020383	-	54	61.017	ENSANAG00000031718	SRRT	93	53.236	Aotus_nancymaae
ENSGAFG00000020383	-	93	75.832	ENSACLG00000009423	-	98	76.471	Astatotilapia_calliptera
ENSGAFG00000020383	-	54	63.203	ENSACLG00000013156	srrt	50	63.067	Astatotilapia_calliptera
ENSGAFG00000020383	-	53	63.077	ENSAMXG00000016671	srrt	50	62.963	Astyanax_mexicanus
ENSGAFG00000020383	-	54	61.229	ENSBTAG00000001134	SRRT	93	52.381	Bos_taurus
ENSGAFG00000020383	-	71	37.908	WBGene00017085	E01A2.2	85	40.000	Caenorhabditis_elegans
ENSGAFG00000020383	-	54	61.229	ENSCJAG00000014917	SRRT	93	53.056	Callithrix_jacchus
ENSGAFG00000020383	-	96	54.417	ENSCAFG00000023538	SRRT	93	52.015	Canis_familiaris
ENSGAFG00000020383	-	96	54.492	ENSCAFG00020013358	SRRT	97	52.040	Canis_lupus_dingo
ENSGAFG00000020383	-	54	61.407	ENSCHIG00000010495	SRRT	93	53.236	Capra_hircus
ENSGAFG00000020383	-	96	53.278	ENSTSYG00000036426	SRRT	96	52.422	Carlito_syrichta
ENSGAFG00000020383	-	54	62.121	ENSCAPG00000013586	SRRT	97	54.512	Cavia_aperea
ENSGAFG00000020383	-	54	61.311	ENSCPOG00000001739	SRRT	93	53.537	Cavia_porcellus
ENSGAFG00000020383	-	54	61.017	ENSCCAG00000015877	SRRT	93	53.236	Cebus_capucinus
ENSGAFG00000020383	-	54	61.194	ENSCATG00000036306	SRRT	94	52.657	Cercocebus_atys
ENSGAFG00000020383	-	96	54.459	ENSCLAG00000007568	SRRT	93	53.480	Chinchilla_lanigera
ENSGAFG00000020383	-	54	61.017	ENSCSAG00000017996	SRRT	93	53.293	Chlorocebus_sabaeus
ENSGAFG00000020383	-	53	62.044	ENSCHOG00000007815	SRRT	66	56.270	Choloepus_hoffmanni
ENSGAFG00000020383	-	71	58.605	ENSCPBG00000011553	SRRT	75	57.561	Chrysemys_picta_bellii
ENSGAFG00000020383	-	100	39.663	ENSCING00000003506	-	54	47.059	Ciona_intestinalis
ENSGAFG00000020383	-	100	38.976	ENSCSAVG00000008394	-	82	52.035	Ciona_savignyi
ENSGAFG00000020383	-	54	61.194	ENSCANG00000034556	SRRT	93	53.244	Colobus_angolensis_palliatus
ENSGAFG00000020383	-	54	60.593	ENSCGRG00001001594	Srrt	93	53.528	Cricetulus_griseus_chok1gshd
ENSGAFG00000020383	-	87	60.000	ENSCGRG00000007292	Srrt	89	56.540	Cricetulus_griseus_crigri
ENSGAFG00000020383	-	96	51.852	ENSCSEG00000017878	srrt	50	57.826	Cynoglossus_semilaevis
ENSGAFG00000020383	-	83	80.749	ENSCSEG00000005233	-	82	81.858	Cynoglossus_semilaevis
ENSGAFG00000020383	-	90	81.915	ENSCVAG00000017344	-	98	82.048	Cyprinodon_variegatus
ENSGAFG00000020383	-	94	56.044	ENSCVAG00000019848	srrt	92	55.303	Cyprinodon_variegatus
ENSGAFG00000020383	-	55	63.734	ENSDARG00000017762	srrt	92	53.025	Danio_rerio
ENSGAFG00000020383	-	54	61.017	ENSDNOG00000003851	SRRT	93	52.126	Dasypus_novemcinctus
ENSGAFG00000020383	-	96	53.910	ENSDORG00000005584	Srrt	89	57.143	Dipodomys_ordii
ENSGAFG00000020383	-	91	45.472	FBgn0033062	Ars2	67	49.676	Drosophila_melanogaster
ENSGAFG00000020383	-	77	58.750	ENSETEG00000016175	SRRT	68	57.829	Echinops_telfairi
ENSGAFG00000020383	-	77	50.000	ENSEBUG00000008517	-	65	59.259	Eptatretus_burgeri
ENSGAFG00000020383	-	96	53.710	ENSEASG00005016956	SRRT	93	53.114	Equus_asinus_asinus
ENSGAFG00000020383	-	96	53.710	ENSECAG00000012292	SRRT	93	53.114	Equus_caballus
ENSGAFG00000020383	-	78	64.103	ENSEEUG00000009117	SRRT	85	56.716	Erinaceus_europaeus
ENSGAFG00000020383	-	93	65.269	ENSELUG00000021216	-	93	64.855	Esox_lucius
ENSGAFG00000020383	-	96	54.064	ENSFCAG00000006855	SRRT	93	52.855	Felis_catus
ENSGAFG00000020383	-	54	59.130	ENSFDAG00000021347	SRRT	92	52.723	Fukomys_damarensis
ENSGAFG00000020383	-	79	63.725	ENSFHEG00000002756	srrt	85	63.235	Fundulus_heteroclitus
ENSGAFG00000020383	-	55	77.204	ENSFHEG00000004105	-	94	76.316	Fundulus_heteroclitus
ENSGAFG00000020383	-	95	53.765	ENSGMOG00000018619	srrt	51	60.870	Gadus_morhua
ENSGAFG00000020383	-	82	73.673	ENSGMOG00000018694	-	83	66.715	Gadus_morhua
ENSGAFG00000020383	-	93	69.315	ENSGACG00000001100	-	93	69.767	Gasterosteus_aculeatus
ENSGAFG00000020383	-	94	55.066	ENSGACG00000020387	srrt	51	63.147	Gasterosteus_aculeatus
ENSGAFG00000020383	-	54	61.194	ENSGGOG00000001508	SRRT	93	53.611	Gorilla_gorilla
ENSGAFG00000020383	-	54	63.067	ENSHBUG00000002942	srrt	50	63.067	Haplochromis_burtoni
ENSGAFG00000020383	-	96	54.289	ENSHGLG00000008344	Srrt	93	53.471	Heterocephalus_glaber_female
ENSGAFG00000020383	-	96	54.675	ENSHGLG00100018857	Srrt	93	53.742	Heterocephalus_glaber_male
ENSGAFG00000020383	-	93	70.850	ENSHCOG00000008904	-	97	71.750	Hippocampus_comes
ENSGAFG00000020383	-	98	56.295	ENSHCOG00000005403	srrt	92	55.260	Hippocampus_comes
ENSGAFG00000020383	-	55	62.796	ENSIPUG00000021150	srrt	51	63.341	Ictalurus_punctatus
ENSGAFG00000020383	-	54	61.194	ENSSTOG00000013776	SRRT	93	52.561	Ictidomys_tridecemlineatus
ENSGAFG00000020383	-	96	54.654	ENSJJAG00000010446	Srrt	89	57.569	Jaculus_jaculus
ENSGAFG00000020383	-	94	56.413	ENSKMAG00000013599	srrt	92	55.852	Kryptolebias_marmoratus
ENSGAFG00000020383	-	93	75.339	ENSKMAG00000008468	-	93	73.608	Kryptolebias_marmoratus
ENSGAFG00000020383	-	64	64.073	ENSLBEG00000028983	-	97	62.963	Labrus_bergylta
ENSGAFG00000020383	-	94	47.388	ENSLACG00000001089	SRRT	92	46.192	Latimeria_chalumnae
ENSGAFG00000020383	-	54	54.425	ENSLOCG00000013658	srrt	100	46.988	Lepisosteus_oculatus
ENSGAFG00000020383	-	54	61.017	ENSLAFG00000007725	SRRT	93	53.178	Loxodonta_africana
ENSGAFG00000020383	-	54	61.194	ENSMFAG00000033745	SRRT	97	52.657	Macaca_fascicularis
ENSGAFG00000020383	-	54	61.017	ENSMMUG00000021255	SRRT	93	53.293	Macaca_mulatta
ENSGAFG00000020383	-	54	61.017	ENSMNEG00000041864	SRRT	94	52.657	Macaca_nemestrina
ENSGAFG00000020383	-	54	61.194	ENSMLEG00000029479	SRRT	95	52.657	Mandrillus_leucophaeus
ENSGAFG00000020383	-	93	75.871	ENSMAMG00000010681	-	93	75.531	Mastacembelus_armatus
ENSGAFG00000020383	-	54	63.261	ENSMAMG00000014311	srrt	52	63.617	Mastacembelus_armatus
ENSGAFG00000020383	-	54	63.203	ENSMZEG00005016135	srrt	50	63.067	Maylandia_zebra
ENSGAFG00000020383	-	93	75.956	ENSMZEG00005028002	-	98	76.588	Maylandia_zebra
ENSGAFG00000020383	-	96	54.835	ENSMAUG00000011386	Srrt	93	53.049	Mesocricetus_auratus
ENSGAFG00000020383	-	54	61.229	ENSMICG00000009471	SRRT	95	52.473	Microcebus_murinus
ENSGAFG00000020383	-	96	53.037	ENSMOCG00000001971	Srrt	93	53.106	Microtus_ochrogaster
ENSGAFG00000020383	-	95	57.266	ENSMMOG00000016399	srrt	92	55.781	Mola_mola
ENSGAFG00000020383	-	83	71.093	ENSMMOG00000011137	-	88	71.093	Mola_mola
ENSGAFG00000020383	-	54	57.895	ENSMODG00000004862	SRRT	89	58.737	Monodelphis_domestica
ENSGAFG00000020383	-	70	53.445	ENSMALG00000005567	-	100	53.782	Monopterus_albus
ENSGAFG00000020383	-	96	54.231	MGP_CAROLIEiJ_G0027870	Srrt	93	53.537	Mus_caroli
ENSGAFG00000020383	-	96	54.231	ENSMUSG00000037364	Srrt	93	53.537	Mus_musculus
ENSGAFG00000020383	-	54	61.039	MGP_PahariEiJ_G0024456	Srrt	94	57.143	Mus_pahari
ENSGAFG00000020383	-	96	54.231	MGP_SPRETEiJ_G0028875	Srrt	93	53.537	Mus_spretus
ENSGAFG00000020383	-	96	54.026	ENSMPUG00000015839	SRRT	93	52.991	Mustela_putorius_furo
ENSGAFG00000020383	-	54	60.381	ENSMLUG00000009975	SRRT	93	53.358	Myotis_lucifugus
ENSGAFG00000020383	-	54	60.381	ENSNGAG00000023715	Srrt	100	54.240	Nannospalax_galili
ENSGAFG00000020383	-	54	62.690	ENSNBRG00000019100	srrt	92	52.741	Neolamprologus_brichardi
ENSGAFG00000020383	-	95	52.264	ENSNLEG00000011987	SRRT	97	51.077	Nomascus_leucogenys
ENSGAFG00000020383	-	94	46.359	ENSMEUG00000011941	SRRT	92	45.499	Notamacropus_eugenii
ENSGAFG00000020383	-	64	59.398	ENSOPRG00000002502	-	67	57.252	Ochotona_princeps
ENSGAFG00000020383	-	54	61.905	ENSODEG00000016856	SRRT	89	57.479	Octodon_degus
ENSGAFG00000020383	-	54	63.203	ENSONIG00000004242	srrt	52	62.156	Oreochromis_niloticus
ENSGAFG00000020383	-	93	75.892	ENSONIG00000016080	-	93	74.908	Oreochromis_niloticus
ENSGAFG00000020383	-	96	55.282	ENSORLG00020003058	srrt	52	63.557	Oryzias_latipes_hni
ENSGAFG00000020383	-	96	55.282	ENSORLG00015008062	srrt	52	63.774	Oryzias_latipes_hsok
ENSGAFG00000020383	-	96	56.720	ENSOMEG00000003155	srrt	92	55.128	Oryzias_melastigma
ENSGAFG00000020383	-	98	75.917	ENSOMEG00000006963	-	98	75.795	Oryzias_melastigma
ENSGAFG00000020383	-	54	61.229	ENSOGAG00000017242	SRRT	93	52.927	Otolemur_garnettii
ENSGAFG00000020383	-	54	61.407	ENSOARG00000015645	SRRT	93	53.374	Ovis_aries
ENSGAFG00000020383	-	54	61.194	ENSPPAG00000041090	SRRT	93	53.554	Pan_paniscus
ENSGAFG00000020383	-	96	54.137	ENSPPRG00000009557	SRRT	93	52.812	Panthera_pardus
ENSGAFG00000020383	-	96	53.810	ENSPTIG00000014355	SRRT	93	52.259	Panthera_tigris_altaica
ENSGAFG00000020383	-	54	61.194	ENSPTRG00000019511	SRRT	98	51.453	Pan_troglodytes
ENSGAFG00000020383	-	54	60.000	ENSPANG00000020763	SRRT	94	52.657	Papio_anubis
ENSGAFG00000020383	-	94	55.394	ENSPKIG00000022212	-	93	54.300	Paramormyrops_kingsleyae
ENSGAFG00000020383	-	96	56.250	ENSPKIG00000005434	srrt	92	55.306	Paramormyrops_kingsleyae
ENSGAFG00000020383	-	55	58.761	ENSPSIG00000016311	SRRT	93	51.665	Pelodiscus_sinensis
ENSGAFG00000020383	-	96	56.273	ENSPMGG00000002841	srrt	92	56.061	Periophthalmus_magnuspinnatus
ENSGAFG00000020383	-	54	61.039	ENSPEMG00000010834	Srrt	92	55.187	Peromyscus_maniculatus_bairdii
ENSGAFG00000020383	-	96	50.534	ENSPMAG00000009614	-	55	58.650	Petromyzon_marinus
ENSGAFG00000020383	-	54	59.574	ENSPCIG00000000816	SRRT	93	52.542	Phascolarctos_cinereus
ENSGAFG00000020383	-	100	96.341	ENSPFOG00000016554	-	100	96.341	Poecilia_formosa
ENSGAFG00000020383	-	54	64.348	ENSPFOG00000005704	srrt	93	52.248	Poecilia_formosa
ENSGAFG00000020383	-	94	54.888	ENSPLAG00000021992	srrt	74	63.696	Poecilia_latipinna
ENSGAFG00000020383	-	100	95.859	ENSPLAG00000004526	-	100	95.859	Poecilia_latipinna
ENSGAFG00000020383	-	95	95.624	ENSPMEG00000001520	-	97	95.238	Poecilia_mexicana
ENSGAFG00000020383	-	79	63.499	ENSPMEG00000001182	srrt	93	52.068	Poecilia_mexicana
ENSGAFG00000020383	-	94	55.609	ENSPREG00000022308	srrt	52	64.130	Poecilia_reticulata
ENSGAFG00000020383	-	54	58.542	ENSPCAG00000001621	SRRT	93	51.332	Procavia_capensis
ENSGAFG00000020383	-	54	61.407	ENSPCOG00000025751	SRRT	93	52.927	Propithecus_coquereli
ENSGAFG00000020383	-	63	59.722	ENSPVAG00000000834	SRRT	100	46.512	Pteropus_vampyrus
ENSGAFG00000020383	-	54	63.203	ENSPNYG00000018710	srrt	52	63.067	Pundamilia_nyererei
ENSGAFG00000020383	-	64	61.972	ENSPNAG00000010629	srrt	65	54.478	Pygocentrus_nattereri
ENSGAFG00000020383	-	54	50.749	ENSRNOG00000048277	AABR07035787.1	92	50.535	Rattus_norvegicus
ENSGAFG00000020383	-	54	61.017	ENSRBIG00000035718	SRRT	94	52.657	Rhinopithecus_bieti
ENSGAFG00000020383	-	54	61.017	ENSRROG00000030622	SRRT	95	52.657	Rhinopithecus_roxellana
ENSGAFG00000020383	-	54	61.194	ENSSBOG00000033570	SRRT	94	53.252	Saimiri_boliviensis_boliviensis
ENSGAFG00000020383	-	56	57.895	ENSSHAG00000007349	-	74	60.211	Sarcophilus_harrisii
ENSGAFG00000020383	-	54	65.435	ENSSFOG00015017293	srrt	51	64.565	Scleropages_formosus
ENSGAFG00000020383	-	94	57.377	ENSSMAG00000015342	srrt	92	56.522	Scophthalmus_maximus
ENSGAFG00000020383	-	81	69.591	ENSSMAG00000018195	-	97	69.259	Scophthalmus_maximus
ENSGAFG00000020383	-	55	64.195	ENSSDUG00000002051	-	94	64.224	Seriola_dumerili
ENSGAFG00000020383	-	54	64.208	ENSSDUG00000012049	srrt	92	54.501	Seriola_dumerili
ENSGAFG00000020383	-	83	64.912	ENSSLDG00000017477	srrt	80	64.474	Seriola_lalandi_dorsalis
ENSGAFG00000020383	-	85	73.663	ENSSPAG00000018943	-	97	71.792	Stegastes_partitus
ENSGAFG00000020383	-	51	61.124	ENSSSCG00000024789	SRRT	98	52.534	Sus_scrofa
ENSGAFG00000020383	-	54	61.028	ENSTRUG00000016075	srrt	52	61.752	Takifugu_rubripes
ENSGAFG00000020383	-	90	72.836	ENSTRUG00000000023	-	94	73.419	Takifugu_rubripes
ENSGAFG00000020383	-	93	68.109	ENSTNIG00000003111	-	93	67.072	Tetraodon_nigroviridis
ENSGAFG00000020383	-	73	53.528	ENSTNIG00000011779	srrt	100	52.977	Tetraodon_nigroviridis
ENSGAFG00000020383	-	54	61.017	ENSTTRG00000011104	SRRT	93	53.236	Tursiops_truncatus
ENSGAFG00000020383	-	94	53.791	ENSUAMG00000027997	SRRT	95	53.019	Ursus_americanus
ENSGAFG00000020383	-	96	53.946	ENSUMAG00000011295	SRRT	93	52.842	Ursus_maritimus
ENSGAFG00000020383	-	96	54.417	ENSVVUG00000023572	SRRT	93	52.015	Vulpes_vulpes
ENSGAFG00000020383	-	96	47.418	ENSXETG00000025124	srrt	72	57.479	Xenopus_tropicalis
ENSGAFG00000020383	-	55	79.121	ENSXCOG00000013105	-	91	78.747	Xiphophorus_couchianus
ENSGAFG00000020383	-	100	96.833	ENSXMAG00000002090	-	100	96.833	Xiphophorus_maculatus
ENSGAFG00000020383	-	54	63.913	ENSXMAG00000007627	srrt	92	55.019	Xiphophorus_maculatus