EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000020486 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 10506 bases
Position: chrNHOQ01002174.1:364150-374655
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000030406	RRM_1	PF00076.22	7.3e-12	1	1
ENSGAFP00000030404	RRM_1	PF00076.22	9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000030714	-	801	-	ENSGAFP00000030406	266 (aa)	-	-
ENSGAFT00000030712	-	2074	-	ENSGAFP00000030404	306 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020486's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000020486	-	99	68.345	ENSGAFG00000020992	-	89	74.820

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020486	-	98	48.352	ENSG00000184672	RALYL	91	76.623	Homo_sapiens
ENSGAFG00000020486	-	93	85.915	ENSAPOG00000006963	hnrnpc	92	86.620	Acanthochromis_polyacanthus
ENSGAFG00000020486	-	99	69.118	ENSACIG00000016568	-	90	76.786	Amphilophus_citrinellus
ENSGAFG00000020486	-	89	88.321	ENSACIG00000000270	-	99	85.763	Amphilophus_citrinellus
ENSGAFG00000020486	-	82	78.539	ENSAOCG00000021616	-	87	75.000	Amphiprion_ocellaris
ENSGAFG00000020486	-	93	85.563	ENSAOCG00000003896	-	92	86.268	Amphiprion_ocellaris
ENSGAFG00000020486	-	81	78.899	ENSAPEG00000019962	-	88	75.090	Amphiprion_percula
ENSGAFG00000020486	-	93	85.563	ENSAPEG00000001489	-	92	86.268	Amphiprion_percula
ENSGAFG00000020486	-	100	85.437	ENSATEG00000011734	-	100	83.495	Anabas_testudineus
ENSGAFG00000020486	-	82	80.734	ENSATEG00000018006	-	80	84.475	Anabas_testudineus
ENSGAFG00000020486	-	78	51.111	ENSAPLG00000015574	RALYL	75	55.310	Anas_platyrhynchos
ENSGAFG00000020486	-	78	50.222	ENSACAG00000028464	RALYL	74	54.425	Anolis_carolinensis
ENSGAFG00000020486	-	78	57.277	ENSANAG00000023383	RALYL	73	58.879	Aotus_nancymaae
ENSGAFG00000020486	-	87	73.801	ENSACLG00000005707	-	92	76.923	Astatotilapia_calliptera
ENSGAFG00000020486	-	100	85.016	ENSACLG00000013636	-	95	85.563	Astatotilapia_calliptera
ENSGAFG00000020486	-	100	85.342	ENSACLG00000000995	-	100	84.039	Astatotilapia_calliptera
ENSGAFG00000020486	-	80	71.831	ENSAMXG00000042946	hnrnpc	100	71.000	Astyanax_mexicanus
ENSGAFG00000020486	-	81	83.333	ENSAMXG00000034915	zgc:55733	91	73.962	Astyanax_mexicanus
ENSGAFG00000020486	-	78	55.660	ENSCJAG00000000402	RALYL	73	57.277	Callithrix_jacchus
ENSGAFG00000020486	-	86	46.429	ENSCPOG00000012314	RALYL	74	55.405	Cavia_porcellus
ENSGAFG00000020486	-	86	49.254	ENSCCAG00000025003	RALYL	75	76.623	Cebus_capucinus
ENSGAFG00000020486	-	98	48.352	ENSCATG00000042145	RALYL	73	57.746	Cercocebus_atys
ENSGAFG00000020486	-	80	51.754	ENSCLAG00000005228	RALYL	74	54.911	Chinchilla_lanigera
ENSGAFG00000020486	-	78	50.667	ENSCHOG00000013228	RALYL	74	50.644	Choloepus_hoffmanni
ENSGAFG00000020486	-	98	48.352	ENSCANG00000039144	RALYL	73	57.746	Colobus_angolensis_palliatus
ENSGAFG00000020486	-	98	45.804	ENSCGRG00001009241	Ralyl	74	55.310	Cricetulus_griseus_chok1gshd
ENSGAFG00000020486	-	100	62.162	ENSCSEG00000019769	-	74	75.909	Cynoglossus_semilaevis
ENSGAFG00000020486	-	83	76.682	ENSCSEG00000021349	-	84	71.795	Cynoglossus_semilaevis
ENSGAFG00000020486	-	80	81.651	ENSCVAG00000016981	-	87	73.611	Cyprinodon_variegatus
ENSGAFG00000020486	-	96	76.610	ENSCVAG00000002797	-	98	76.632	Cyprinodon_variegatus
ENSGAFG00000020486	-	81	75.229	ENSDARG00000053810	hnrnpc	86	73.285	Danio_rerio
ENSGAFG00000020486	-	91	75.269	ENSDARG00000103845	zgc:55733	99	72.183	Danio_rerio
ENSGAFG00000020486	-	78	51.556	ENSDORG00000003721	Ralyl	74	55.556	Dipodomys_ordii
ENSGAFG00000020486	-	61	54.335	ENSETEG00000014028	RALYL	86	57.225	Echinops_telfairi
ENSGAFG00000020486	-	78	48.341	ENSEBUG00000006049	RALYL	88	41.758	Eptatretus_burgeri
ENSGAFG00000020486	-	80	46.930	ENSEBUG00000012363	hnrnpc	65	47.788	Eptatretus_burgeri
ENSGAFG00000020486	-	80	51.092	ENSEEUG00000007202	RALYL	76	54.222	Erinaceus_europaeus
ENSGAFG00000020486	-	85	76.327	ENSELUG00000007714	-	96	75.352	Esox_lucius
ENSGAFG00000020486	-	81	81.106	ENSELUG00000004132	-	93	76.259	Esox_lucius
ENSGAFG00000020486	-	78	57.674	ENSFALG00000008647	RALYL	96	59.259	Ficedula_albicollis
ENSGAFG00000020486	-	93	89.085	ENSFHEG00000003605	-	93	89.085	Fundulus_heteroclitus
ENSGAFG00000020486	-	82	75.847	ENSFHEG00000007278	-	90	69.435	Fundulus_heteroclitus
ENSGAFG00000020486	-	78	54.673	ENSGALG00000036938	RALYL	74	55.310	Gallus_gallus
ENSGAFG00000020486	-	88	75.458	ENSGACG00000017772	-	99	74.721	Gasterosteus_aculeatus
ENSGAFG00000020486	-	82	71.429	ENSGACG00000018932	-	87	72.018	Gasterosteus_aculeatus
ENSGAFG00000020486	-	98	48.352	ENSGGOG00000000841	RALYL	73	57.746	Gorilla_gorilla
ENSGAFG00000020486	-	99	68.847	ENSHBUG00000010527	-	87	76.241	Haplochromis_burtoni
ENSGAFG00000020486	-	100	85.668	ENSHBUG00000018342	-	100	84.365	Haplochromis_burtoni
ENSGAFG00000020486	-	80	51.754	ENSHGLG00000004866	RALYL	74	54.911	Heterocephalus_glaber_female
ENSGAFG00000020486	-	80	51.754	ENSHGLG00100017480	RALYL	74	54.911	Heterocephalus_glaber_male
ENSGAFG00000020486	-	81	77.293	ENSHCOG00000012333	hnrnpc	95	70.508	Hippocampus_comes
ENSGAFG00000020486	-	85	78.947	ENSIPUG00000011271	hnrnpc	98	76.316	Ictalurus_punctatus
ENSGAFG00000020486	-	100	69.888	ENSIPUG00000008666	zgc:55733	95	80.000	Ictalurus_punctatus
ENSGAFG00000020486	-	78	51.556	ENSSTOG00000012583	RALYL	76	55.556	Ictidomys_tridecemlineatus
ENSGAFG00000020486	-	92	87.589	ENSKMAG00000011170	-	91	87.324	Kryptolebias_marmoratus
ENSGAFG00000020486	-	80	79.167	ENSKMAG00000018265	-	86	75.089	Kryptolebias_marmoratus
ENSGAFG00000020486	-	85	74.525	ENSLBEG00000006193	-	86	74.194	Labrus_bergylta
ENSGAFG00000020486	-	88	81.111	ENSLBEG00000006979	-	91	81.111	Labrus_bergylta
ENSGAFG00000020486	-	89	76.241	ENSLBEG00000024418	-	91	76.259	Labrus_bergylta
ENSGAFG00000020486	-	86	66.667	ENSLOCG00000002560	hnrnpc	93	69.091	Lepisosteus_oculatus
ENSGAFG00000020486	-	98	48.352	ENSMNEG00000033288	RALYL	73	57.746	Macaca_nemestrina
ENSGAFG00000020486	-	98	48.352	ENSMLEG00000038284	RALYL	73	57.746	Mandrillus_leucophaeus
ENSGAFG00000020486	-	81	80.184	ENSMAMG00000008033	-	94	75.000	Mastacembelus_armatus
ENSGAFG00000020486	-	93	83.509	ENSMAMG00000012236	-	92	84.561	Mastacembelus_armatus
ENSGAFG00000020486	-	99	68.847	ENSMZEG00005024249	-	87	76.241	Maylandia_zebra
ENSGAFG00000020486	-	100	85.342	ENSMZEG00005020460	-	100	84.039	Maylandia_zebra
ENSGAFG00000020486	-	98	45.804	ENSMAUG00000015149	Ralyl	74	55.310	Mesocricetus_auratus
ENSGAFG00000020486	-	80	54.839	ENSMICG00000005558	RALYL	80	74.684	Microcebus_murinus
ENSGAFG00000020486	-	98	46.263	ENSMOCG00000017371	Ralyl	74	55.310	Microtus_ochrogaster
ENSGAFG00000020486	-	99	72.453	ENSMMOG00000019520	-	88	76.692	Mola_mola
ENSGAFG00000020486	-	81	86.574	ENSMMOG00000021465	-	93	82.707	Mola_mola
ENSGAFG00000020486	-	86	78.409	ENSMALG00000014623	-	86	76.173	Monopterus_albus
ENSGAFG00000020486	-	80	77.358	ENSMALG00000007520	-	98	74.227	Monopterus_albus
ENSGAFG00000020486	-	98	45.455	ENSMUSG00000039717	Ralyl	91	75.325	Mus_musculus
ENSGAFG00000020486	-	80	51.965	ENSMPUG00000010724	RALYL	74	54.425	Mustela_putorius_furo
ENSGAFG00000020486	-	98	46.403	ENSNGAG00000013375	Ralyl	74	55.310	Nannospalax_galili
ENSGAFG00000020486	-	98	69.118	ENSNBRG00000015676	-	87	76.241	Neolamprologus_brichardi
ENSGAFG00000020486	-	95	84.899	ENSNBRG00000004912	-	89	86.989	Neolamprologus_brichardi
ENSGAFG00000020486	-	98	48.352	ENSNLEG00000002702	RALYL	70	57.746	Nomascus_leucogenys
ENSGAFG00000020486	-	67	48.454	ENSOPRG00000013650	-	98	46.766	Ochotona_princeps
ENSGAFG00000020486	-	78	52.679	ENSODEG00000001012	RALYL	74	54.911	Octodon_degus
ENSGAFG00000020486	-	92	82.927	ENSONIG00000007859	-	99	84.321	Oreochromis_niloticus
ENSGAFG00000020486	-	99	68.536	ENSONIG00000018350	-	87	75.887	Oreochromis_niloticus
ENSGAFG00000020486	-	100	76.948	ENSORLG00000009999	-	100	75.974	Oryzias_latipes
ENSGAFG00000020486	-	82	74.427	ENSORLG00000003144	-	95	70.000	Oryzias_latipes
ENSGAFG00000020486	-	100	76.623	ENSORLG00020018228	hnrnpc	100	75.649	Oryzias_latipes_hni
ENSGAFG00000020486	-	100	76.948	ENSORLG00015019755	-	100	75.974	Oryzias_latipes_hsok
ENSGAFG00000020486	-	82	74.427	ENSORLG00015009460	-	85	74.913	Oryzias_latipes_hsok
ENSGAFG00000020486	-	80	79.263	ENSOMEG00000022665	-	86	76.786	Oryzias_melastigma
ENSGAFG00000020486	-	87	77.612	ENSOMEG00000020488	-	95	77.816	Oryzias_melastigma
ENSGAFG00000020486	-	98	48.352	ENSPPAG00000038705	RALYL	73	57.746	Pan_paniscus
ENSGAFG00000020486	-	80	54.587	ENSPPRG00000018612	RALYL	73	58.333	Panthera_pardus
ENSGAFG00000020486	-	80	54.587	ENSPTIG00000020331	RALYL	73	58.333	Panthera_tigris_altaica
ENSGAFG00000020486	-	98	48.352	ENSPTRG00000020381	RALYL	73	57.746	Pan_troglodytes
ENSGAFG00000020486	-	98	48.352	ENSPANG00000029305	RALYL	73	57.746	Papio_anubis
ENSGAFG00000020486	-	91	73.519	ENSPKIG00000008592	-	87	74.910	Paramormyrops_kingsleyae
ENSGAFG00000020486	-	91	74.035	ENSPKIG00000022837	-	86	78.339	Paramormyrops_kingsleyae
ENSGAFG00000020486	-	78	51.111	ENSPSIG00000011135	RALYL	74	55.310	Pelodiscus_sinensis
ENSGAFG00000020486	-	100	73.684	ENSPMGG00000013144	-	95	70.342	Periophthalmus_magnuspinnatus
ENSGAFG00000020486	-	99	59.398	ENSPMGG00000017774	-	98	56.981	Periophthalmus_magnuspinnatus
ENSGAFG00000020486	-	98	45.804	ENSPEMG00000016447	Ralyl	74	55.310	Peromyscus_maniculatus_bairdii
ENSGAFG00000020486	-	78	52.655	ENSPMAG00000002407	RALYL	96	52.655	Petromyzon_marinus
ENSGAFG00000020486	-	95	68.506	ENSPFOG00000002643	-	87	74.648	Poecilia_formosa
ENSGAFG00000020486	-	100	94.463	ENSPFOG00000001583	-	100	94.463	Poecilia_formosa
ENSGAFG00000020486	-	100	95.098	ENSPLAG00000015305	-	100	95.098	Poecilia_latipinna
ENSGAFG00000020486	-	80	78.241	ENSPLAG00000000061	-	86	74.648	Poecilia_latipinna
ENSGAFG00000020486	-	80	78.241	ENSPMEG00000016524	-	87	74.296	Poecilia_mexicana
ENSGAFG00000020486	-	100	95.098	ENSPMEG00000004802	-	100	95.098	Poecilia_mexicana
ENSGAFG00000020486	-	83	75.664	ENSPREG00000001852	-	92	74.101	Poecilia_reticulata
ENSGAFG00000020486	-	100	94.118	ENSPREG00000007928	-	100	94.118	Poecilia_reticulata
ENSGAFG00000020486	-	98	46.575	ENSPVAG00000010821	RALYL	78	52.966	Pteropus_vampyrus
ENSGAFG00000020486	-	91	85.921	ENSPNYG00000020293	-	92	85.874	Pundamilia_nyererei
ENSGAFG00000020486	-	98	67.754	ENSPNYG00000003747	-	91	76.364	Pundamilia_nyererei
ENSGAFG00000020486	-	81	81.106	ENSPNAG00000015686	hnrnpc	88	75.665	Pygocentrus_nattereri
ENSGAFG00000020486	-	81	79.821	ENSPNAG00000019200	zgc:55733	87	73.835	Pygocentrus_nattereri
ENSGAFG00000020486	-	98	48.352	ENSRROG00000023925	RALYL	80	74.684	Rhinopithecus_roxellana
ENSGAFG00000020486	-	91	72.428	ENSSFOG00015012015	-	98	69.403	Scleropages_formosus
ENSGAFG00000020486	-	81	80.995	ENSSFOG00015012924	-	81	91.358	Scleropages_formosus
ENSGAFG00000020486	-	93	82.168	ENSSMAG00000013592	-	91	82.168	Scophthalmus_maximus
ENSGAFG00000020486	-	99	68.382	ENSSMAG00000011147	-	96	70.741	Scophthalmus_maximus
ENSGAFG00000020486	-	98	71.565	ENSSDUG00000006730	-	87	76.259	Seriola_dumerili
ENSGAFG00000020486	-	93	85.915	ENSSDUG00000001723	-	100	83.117	Seriola_dumerili
ENSGAFG00000020486	-	86	77.358	ENSSLDG00000007474	-	92	76.015	Seriola_lalandi_dorsalis
ENSGAFG00000020486	-	91	85.663	ENSSLDG00000007454	-	92	85.461	Seriola_lalandi_dorsalis
ENSGAFG00000020486	-	98	69.841	ENSSPAG00000013996	-	87	75.089	Stegastes_partitus
ENSGAFG00000020486	-	92	85.765	ENSSPAG00000023204	-	92	85.915	Stegastes_partitus
ENSGAFG00000020486	-	78	51.111	ENSTGUG00000011689	RALYL	76	55.310	Taeniopygia_guttata
ENSGAFG00000020486	-	83	82.432	ENSTRUG00000020158	-	89	80.370	Takifugu_rubripes
ENSGAFG00000020486	-	81	75.576	ENSTNIG00000000334	-	98	71.910	Tetraodon_nigroviridis
ENSGAFG00000020486	-	83	74.713	ENSTNIG00000007427	-	88	75.735	Tetraodon_nigroviridis
ENSGAFG00000020486	-	86	43.210	ENSTBEG00000005551	RALYL	91	46.721	Tupaia_belangeri
ENSGAFG00000020486	-	78	51.364	ENSTTRG00000015762	RALYL	74	54.299	Tursiops_truncatus
ENSGAFG00000020486	-	78	51.174	ENSVPAG00000008501	RALYL	74	53.953	Vicugna_pacos
ENSGAFG00000020486	-	86	89.773	ENSXCOG00000006552	-	86	89.773	Xiphophorus_couchianus
ENSGAFG00000020486	-	58	82.927	ENSXCOG00000019434	-	93	70.588	Xiphophorus_couchianus
ENSGAFG00000020486	-	80	77.778	ENSXMAG00000022849	-	89	74.460	Xiphophorus_maculatus
ENSGAFG00000020486	-	100	95.425	ENSXMAG00000009333	-	100	95.425	Xiphophorus_maculatus