EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000020570 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: si:ch211-113e8.11
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4648 bases
Position: chrNHOQ01000347.1:6449579-6454226
Accession: ZDB-GENE-090313-12
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000030525	zf-CCCH	PF00642.24	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000030833	-	4410	-	ENSGAFP00000030525	241 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020570's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020570	si:ch211-113e8.11	100	64.231	ENSAPOG00000010990	si:ch211-113e8.11	100	64.615	Acanthochromis_polyacanthus
ENSGAFG00000020570	si:ch211-113e8.11	58	72.414	ENSACIG00000011566	si:ch211-113e8.11	74	73.793	Amphilophus_citrinellus
ENSGAFG00000020570	si:ch211-113e8.11	100	65.891	ENSAOCG00000022156	si:ch211-113e8.11	100	65.891	Amphiprion_ocellaris
ENSGAFG00000020570	si:ch211-113e8.11	100	65.504	ENSAPEG00000018284	si:ch211-113e8.11	100	64.729	Amphiprion_percula
ENSGAFG00000020570	si:ch211-113e8.11	100	61.134	ENSATEG00000018391	si:ch211-113e8.11	100	61.538	Anabas_testudineus
ENSGAFG00000020570	si:ch211-113e8.11	100	64.516	ENSACLG00000017011	si:ch211-113e8.11	100	64.113	Astatotilapia_calliptera
ENSGAFG00000020570	si:ch211-113e8.11	97	50.000	ENSAMXG00000000733	si:ch211-113e8.11	97	49.412	Astyanax_mexicanus
ENSGAFG00000020570	si:ch211-113e8.11	99	58.498	ENSCSEG00000004538	si:ch211-113e8.11	99	57.312	Cynoglossus_semilaevis
ENSGAFG00000020570	si:ch211-113e8.11	100	72.764	ENSCVAG00000020156	si:ch211-113e8.11	99	72.764	Cyprinodon_variegatus
ENSGAFG00000020570	si:ch211-113e8.11	95	48.945	ENSDARG00000076585	si:ch211-113e8.11	97	48.523	Danio_rerio
ENSGAFG00000020570	si:ch211-113e8.11	58	31.613	FBgn0259728	CG42382	76	30.968	Drosophila_melanogaster
ENSGAFG00000020570	si:ch211-113e8.11	100	52.290	ENSELUG00000001130	si:ch211-113e8.11	62	60.000	Esox_lucius
ENSGAFG00000020570	si:ch211-113e8.11	100	65.306	ENSFHEG00000007870	si:ch211-113e8.11	99	63.673	Fundulus_heteroclitus
ENSGAFG00000020570	si:ch211-113e8.11	100	63.306	ENSHBUG00000003552	si:ch211-113e8.11	100	63.306	Haplochromis_burtoni
ENSGAFG00000020570	si:ch211-113e8.11	99	54.217	ENSHCOG00000002041	si:ch211-113e8.11	99	54.618	Hippocampus_comes
ENSGAFG00000020570	si:ch211-113e8.11	95	49.573	ENSIPUG00000002260	si:ch211-113e8.11	93	49.362	Ictalurus_punctatus
ENSGAFG00000020570	si:ch211-113e8.11	100	68.826	ENSKMAG00000000086	si:ch211-113e8.11	99	67.611	Kryptolebias_marmoratus
ENSGAFG00000020570	si:ch211-113e8.11	100	56.180	ENSLBEG00000008353	si:ch211-113e8.11	100	56.929	Labrus_bergylta
ENSGAFG00000020570	si:ch211-113e8.11	63	45.513	ENSLACG00000004304	si:ch211-113e8.11	77	45.513	Latimeria_chalumnae
ENSGAFG00000020570	si:ch211-113e8.11	98	58.566	ENSMAMG00000019098	si:ch211-113e8.11	90	61.233	Mastacembelus_armatus
ENSGAFG00000020570	si:ch211-113e8.11	100	65.041	ENSMZEG00005023658	si:ch211-113e8.11	100	63.525	Maylandia_zebra
ENSGAFG00000020570	si:ch211-113e8.11	66	70.303	ENSMMOG00000007254	si:ch211-113e8.11	75	70.625	Mola_mola
ENSGAFG00000020570	si:ch211-113e8.11	100	60.853	ENSMALG00000005110	si:ch211-113e8.11	100	60.078	Monopterus_albus
ENSGAFG00000020570	si:ch211-113e8.11	100	64.516	ENSNBRG00000015060	si:ch211-113e8.11	100	64.113	Neolamprologus_brichardi
ENSGAFG00000020570	si:ch211-113e8.11	100	55.336	ENSORLG00000023699	si:ch211-113e8.11	100	54.762	Oryzias_latipes
ENSGAFG00000020570	si:ch211-113e8.11	100	55.336	ENSORLG00020022094	si:ch211-113e8.11	100	54.941	Oryzias_latipes_hni
ENSGAFG00000020570	si:ch211-113e8.11	100	54.941	ENSORLG00015002588	si:ch211-113e8.11	100	54.545	Oryzias_latipes_hsok
ENSGAFG00000020570	si:ch211-113e8.11	100	56.680	ENSOMEG00000010624	si:ch211-113e8.11	100	58.300	Oryzias_melastigma
ENSGAFG00000020570	si:ch211-113e8.11	98	47.347	ENSPKIG00000023576	si:ch211-113e8.11	96	44.490	Paramormyrops_kingsleyae
ENSGAFG00000020570	si:ch211-113e8.11	96	55.556	ENSPMGG00000018547	si:ch211-113e8.11	97	53.846	Periophthalmus_magnuspinnatus
ENSGAFG00000020570	si:ch211-113e8.11	98	93.191	ENSPFOG00000007950	si:ch211-113e8.11	100	93.191	Poecilia_formosa
ENSGAFG00000020570	si:ch211-113e8.11	100	94.191	ENSPLAG00000002081	si:ch211-113e8.11	100	94.191	Poecilia_latipinna
ENSGAFG00000020570	si:ch211-113e8.11	100	94.606	ENSPMEG00000017505	si:ch211-113e8.11	100	94.606	Poecilia_mexicana
ENSGAFG00000020570	si:ch211-113e8.11	100	90.041	ENSPREG00000008530	si:ch211-113e8.11	100	90.871	Poecilia_reticulata
ENSGAFG00000020570	si:ch211-113e8.11	100	64.516	ENSPNYG00000022856	si:ch211-113e8.11	100	64.113	Pundamilia_nyererei
ENSGAFG00000020570	si:ch211-113e8.11	98	40.230	ENSPNAG00000013782	si:ch211-113e8.11	66	50.311	Pygocentrus_nattereri
ENSGAFG00000020570	si:ch211-113e8.11	97	43.651	ENSSFOG00015000959	si:ch211-113e8.11	59	52.288	Scleropages_formosus
ENSGAFG00000020570	si:ch211-113e8.11	100	60.956	ENSSMAG00000009732	si:ch211-113e8.11	100	61.355	Scophthalmus_maximus
ENSGAFG00000020570	si:ch211-113e8.11	100	63.529	ENSSDUG00000000112	si:ch211-113e8.11	100	63.529	Seriola_dumerili
ENSGAFG00000020570	si:ch211-113e8.11	100	62.353	ENSSLDG00000003287	si:ch211-113e8.11	100	62.353	Seriola_lalandi_dorsalis
ENSGAFG00000020570	si:ch211-113e8.11	100	64.591	ENSSPAG00000001375	si:ch211-113e8.11	100	63.424	Stegastes_partitus
ENSGAFG00000020570	si:ch211-113e8.11	99	54.365	ENSTRUG00000023898	si:ch211-113e8.11	99	54.118	Takifugu_rubripes
ENSGAFG00000020570	si:ch211-113e8.11	100	94.191	ENSXMAG00000024104	si:ch211-113e8.11	100	94.191	Xiphophorus_maculatus