EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000020571 (Gene tree)
Gene ID: -
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 1577 bases
Position: chrNHOQ01000347.1:6473426-6475002
Accession: ZDB-GENE-030131-9612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000030526	RRM_1	PF00076.22	2.5e-39	1	3
ENSGAFP00000030526	RRM_1	PF00076.22	2.5e-39	2	3
ENSGAFP00000030526	RRM_1	PF00076.22	2.5e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000030834	-	1134	-	ENSGAFP00000030526	377 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000020571	rbm47	80	65.696	ENSGAFG00000020245	rbm46	72	66.667
ENSGAFG00000020571	rbm47	52	38.579	ENSGAFG00000019603	dnd1	53	38.624
ENSGAFG00000020571	rbm47	80	70.957	ENSGAFG00000014868	a1cf	60	67.059
ENSGAFG00000020571	rbm47	80	53.398	ENSGAFG00000007783	syncripl	66	49.036
ENSGAFG00000020571	rbm47	80	54.276	ENSGAFG00000003931	hnrnpr	50	53.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020571	rbm47	99	79.630	ENSG00000163694	RBM47	100	85.253	Homo_sapiens
ENSGAFG00000020571	rbm47	98	93.531	ENSAPOG00000011062	rbm47	72	89.460	Acanthochromis_polyacanthus
ENSGAFG00000020571	rbm47	98	80.319	ENSAMEG00000009672	RBM47	63	83.200	Ailuropoda_melanoleuca
ENSGAFG00000020571	rbm47	98	92.453	ENSACIG00000011531	rbm47	63	92.703	Amphilophus_citrinellus
ENSGAFG00000020571	rbm47	98	93.531	ENSAOCG00000022245	rbm47	72	89.460	Amphiprion_ocellaris
ENSGAFG00000020571	rbm47	98	93.531	ENSAPEG00000018304	rbm47	72	89.487	Amphiprion_percula
ENSGAFG00000020571	rbm47	98	89.433	ENSATEG00000018400	rbm47	64	89.406	Anabas_testudineus
ENSGAFG00000020571	rbm47	98	84.574	ENSAPLG00000013974	RBM47	65	84.574	Anas_platyrhynchos
ENSGAFG00000020571	rbm47	98	80.952	ENSACAG00000011833	RBM47	63	80.952	Anolis_carolinensis
ENSGAFG00000020571	rbm47	98	82.181	ENSANAG00000029440	RBM47	96	82.632	Aotus_nancymaae
ENSGAFG00000020571	rbm47	98	89.378	ENSACLG00000016902	rbm47	72	89.351	Astatotilapia_calliptera
ENSGAFG00000020571	rbm47	94	89.859	ENSAMXG00000021794	rbm47	64	84.238	Astyanax_mexicanus
ENSGAFG00000020571	rbm47	98	81.963	ENSBTAG00000002356	RBM47	64	83.511	Bos_taurus
ENSGAFG00000020571	rbm47	93	85.352	ENSCJAG00000019385	RBM47	96	82.632	Callithrix_jacchus
ENSGAFG00000020571	rbm47	93	84.419	ENSCAFG00000015898	RBM47	64	81.698	Canis_familiaris
ENSGAFG00000020571	rbm47	93	84.136	ENSCAFG00020010558	RBM47	80	81.698	Canis_lupus_dingo
ENSGAFG00000020571	rbm47	98	81.698	ENSCHIG00000026214	RBM47	64	83.245	Capra_hircus
ENSGAFG00000020571	rbm47	60	86.283	ENSTSYG00000033612	RBM47	53	78.599	Carlito_syrichta
ENSGAFG00000020571	rbm47	98	74.332	ENSCAPG00000008426	RBM47	72	74.332	Cavia_aperea
ENSGAFG00000020571	rbm47	98	81.600	ENSCPOG00000014100	RBM47	72	82.933	Cavia_porcellus
ENSGAFG00000020571	rbm47	99	82.632	ENSCCAG00000030129	-	96	82.632	Cebus_capucinus
ENSGAFG00000020571	rbm47	98	56.533	ENSCCAG00000024397	-	65	56.533	Cebus_capucinus
ENSGAFG00000020571	rbm47	99	79.630	ENSCATG00000042064	RBM47	96	82.632	Cercocebus_atys
ENSGAFG00000020571	rbm47	98	81.333	ENSCLAG00000001684	RBM47	100	80.380	Chinchilla_lanigera
ENSGAFG00000020571	rbm47	98	80.533	ENSCSAG00000017060	RBM47	63	83.511	Chlorocebus_sabaeus
ENSGAFG00000020571	rbm47	81	88.197	ENSCHOG00000011731	RBM47	57	85.207	Choloepus_hoffmanni
ENSGAFG00000020571	rbm47	98	85.904	ENSCPBG00000013831	RBM47	63	85.904	Chrysemys_picta_bellii
ENSGAFG00000020571	rbm47	98	81.915	ENSCANG00000019997	RBM47	96	82.632	Colobus_angolensis_palliatus
ENSGAFG00000020571	rbm47	98	81.915	ENSCGRG00001000623	-	72	83.245	Cricetulus_griseus_chok1gshd
ENSGAFG00000020571	rbm47	98	77.067	ENSCGRG00001020102	-	72	78.667	Cricetulus_griseus_chok1gshd
ENSGAFG00000020571	rbm47	98	81.383	ENSCGRG00000007762	-	100	82.278	Cricetulus_griseus_crigri
ENSGAFG00000020571	rbm47	97	78.142	ENSCGRG00000014760	-	69	79.781	Cricetulus_griseus_crigri
ENSGAFG00000020571	rbm47	98	90.860	ENSCSEG00000004545	rbm47	63	90.860	Cynoglossus_semilaevis
ENSGAFG00000020571	rbm47	98	96.496	ENSCVAG00000020144	rbm47	73	92.288	Cyprinodon_variegatus
ENSGAFG00000020571	rbm47	98	84.615	ENSDARG00000061985	rbm47	63	86.544	Danio_rerio
ENSGAFG00000020571	rbm47	98	81.963	ENSDNOG00000046854	RBM47	64	83.777	Dasypus_novemcinctus
ENSGAFG00000020571	rbm47	98	81.266	ENSDORG00000010144	Rbm47	63	81.627	Dipodomys_ordii
ENSGAFG00000020571	rbm47	94	82.682	ENSETEG00000009194	RBM47	63	83.113	Echinops_telfairi
ENSGAFG00000020571	rbm47	98	71.774	ENSEBUG00000011912	rbm47	69	71.850	Eptatretus_burgeri
ENSGAFG00000020571	rbm47	98	81.167	ENSEASG00005008443	RBM47	64	82.979	Equus_asinus_asinus
ENSGAFG00000020571	rbm47	98	81.167	ENSECAG00000004400	RBM47	64	82.979	Equus_caballus
ENSGAFG00000020571	rbm47	98	86.076	ENSELUG00000006148	rbm47	73	86.041	Esox_lucius
ENSGAFG00000020571	rbm47	98	80.319	ENSFCAG00000012399	RBM47	64	83.200	Felis_catus
ENSGAFG00000020571	rbm47	98	83.820	ENSFALG00000002861	RBM47	63	84.043	Ficedula_albicollis
ENSGAFG00000020571	rbm47	98	80.533	ENSFDAG00000016326	RBM47	72	80.533	Fukomys_damarensis
ENSGAFG00000020571	rbm47	98	97.561	ENSFHEG00000007938	rbm47	63	97.561	Fundulus_heteroclitus
ENSGAFG00000020571	rbm47	98	84.772	ENSGMOG00000014802	rbm47	64	84.772	Gadus_morhua
ENSGAFG00000020571	rbm47	98	84.615	ENSGALG00000014267	RBM47	100	84.615	Gallus_gallus
ENSGAFG00000020571	rbm47	98	86.375	ENSGACG00000016223	rbm47	73	86.375	Gasterosteus_aculeatus
ENSGAFG00000020571	rbm47	98	85.638	ENSGAGG00000020051	RBM47	63	85.638	Gopherus_agassizii
ENSGAFG00000020571	rbm47	99	79.630	ENSGGOG00000001367	RBM47	96	82.632	Gorilla_gorilla
ENSGAFG00000020571	rbm47	98	89.378	ENSHBUG00000003520	rbm47	71	89.351	Haplochromis_burtoni
ENSGAFG00000020571	rbm47	98	62.698	ENSHGLG00000016914	RBM47	100	79.747	Heterocephalus_glaber_female
ENSGAFG00000020571	rbm47	98	81.333	ENSHGLG00100014028	-	100	79.747	Heterocephalus_glaber_male
ENSGAFG00000020571	rbm47	98	76.800	ENSHGLG00100003071	-	67	76.800	Heterocephalus_glaber_male
ENSGAFG00000020571	rbm47	98	90.957	ENSHCOG00000002074	rbm47	73	88.432	Hippocampus_comes
ENSGAFG00000020571	rbm47	98	88.649	ENSIPUG00000004743	rbm47	69	84.974	Ictalurus_punctatus
ENSGAFG00000020571	rbm47	98	81.867	ENSSTOG00000004727	RBM47	94	83.444	Ictidomys_tridecemlineatus
ENSGAFG00000020571	rbm47	93	85.876	ENSJJAG00000013823	Rbm47	63	81.963	Jaculus_jaculus
ENSGAFG00000020571	rbm47	98	92.042	ENSKMAG00000000084	rbm47	72	89.231	Kryptolebias_marmoratus
ENSGAFG00000020571	rbm47	98	91.421	ENSLBEG00000008436	rbm47	72	88.205	Labrus_bergylta
ENSGAFG00000020571	rbm47	98	85.904	ENSLACG00000007196	RBM47	63	85.904	Latimeria_chalumnae
ENSGAFG00000020571	rbm47	98	86.096	ENSLOCG00000012966	rbm47	61	87.166	Lepisosteus_oculatus
ENSGAFG00000020571	rbm47	98	82.133	ENSLAFG00000011998	RBM47	63	84.759	Loxodonta_africana
ENSGAFG00000020571	rbm47	99	79.630	ENSMFAG00000037967	RBM47	96	82.632	Macaca_fascicularis
ENSGAFG00000020571	rbm47	99	79.630	ENSMMUG00000012036	RBM47	100	83.420	Macaca_mulatta
ENSGAFG00000020571	rbm47	98	80.749	ENSMNEG00000040774	RBM47	96	82.632	Macaca_nemestrina
ENSGAFG00000020571	rbm47	99	83.175	ENSMLEG00000041432	RBM47	98	85.397	Mandrillus_leucophaeus
ENSGAFG00000020571	rbm47	98	89.664	ENSMAMG00000019143	rbm47	72	89.664	Mastacembelus_armatus
ENSGAFG00000020571	rbm47	98	89.378	ENSMZEG00005023659	rbm47	71	89.378	Maylandia_zebra
ENSGAFG00000020571	rbm47	98	84.881	ENSMGAG00000012226	RBM47	63	85.106	Meleagris_gallopavo
ENSGAFG00000020571	rbm47	98	81.167	ENSMAUG00000006493	Rbm47	100	82.278	Mesocricetus_auratus
ENSGAFG00000020571	rbm47	93	82.336	ENSMICG00000026417	RBM47	73	82.353	Microcebus_murinus
ENSGAFG00000020571	rbm47	98	81.117	ENSMOCG00000021170	Rbm47	100	81.646	Microtus_ochrogaster
ENSGAFG00000020571	rbm47	98	88.860	ENSMMOG00000007260	rbm47	64	88.630	Mola_mola
ENSGAFG00000020571	rbm47	81	78.710	ENSMODG00000015426	-	97	78.710	Monodelphis_domestica
ENSGAFG00000020571	rbm47	95	82.320	ENSMODG00000020561	-	61	82.320	Monodelphis_domestica
ENSGAFG00000020571	rbm47	98	84.043	ENSMODG00000007003	RBM47	63	84.267	Monodelphis_domestica
ENSGAFG00000020571	rbm47	98	92.703	ENSMALG00000005167	rbm47	73	89.147	Monopterus_albus
ENSGAFG00000020571	rbm47	98	81.117	MGP_CAROLIEiJ_G0027258	Rbm47	100	81.646	Mus_caroli
ENSGAFG00000020571	rbm47	98	81.383	ENSMUSG00000070780	Rbm47	100	81.646	Mus_musculus
ENSGAFG00000020571	rbm47	98	81.117	MGP_PahariEiJ_G0017040	Rbm47	100	81.646	Mus_pahari
ENSGAFG00000020571	rbm47	98	81.383	MGP_SPRETEiJ_G0028253	Rbm47	100	81.646	Mus_spretus
ENSGAFG00000020571	rbm47	98	81.383	ENSMPUG00000006177	RBM47	60	83.200	Mustela_putorius_furo
ENSGAFG00000020571	rbm47	97	84.324	ENSMLUG00000000889	RBM47	62	84.324	Myotis_lucifugus
ENSGAFG00000020571	rbm47	98	83.245	ENSNGAG00000003325	Rbm47	63	83.245	Nannospalax_galili
ENSGAFG00000020571	rbm47	98	89.870	ENSNBRG00000015092	rbm47	63	89.870	Neolamprologus_brichardi
ENSGAFG00000020571	rbm47	99	79.630	ENSNLEG00000017151	RBM47	96	82.632	Nomascus_leucogenys
ENSGAFG00000020571	rbm47	95	85.833	ENSMEUG00000009516	-	84	85.833	Notamacropus_eugenii
ENSGAFG00000020571	rbm47	78	84.232	ENSOPRG00000016507	-	51	84.232	Ochotona_princeps
ENSGAFG00000020571	rbm47	98	79.521	ENSODEG00000004873	RBM47	63	82.133	Octodon_degus
ENSGAFG00000020571	rbm47	98	88.918	ENSONIG00000009061	rbm47	64	88.918	Oreochromis_niloticus
ENSGAFG00000020571	rbm47	98	83.202	ENSOANG00000008978	RBM47	65	83.727	Ornithorhynchus_anatinus
ENSGAFG00000020571	rbm47	98	80.902	ENSOCUG00000012034	RBM47	64	82.447	Oryctolagus_cuniculus
ENSGAFG00000020571	rbm47	98	91.689	ENSORLG00000005847	rbm47	73	88.889	Oryzias_latipes
ENSGAFG00000020571	rbm47	98	91.689	ENSORLG00020005154	rbm47	73	88.889	Oryzias_latipes_hni
ENSGAFG00000020571	rbm47	98	91.689	ENSORLG00015000066	rbm47	72	88.889	Oryzias_latipes_hsok
ENSGAFG00000020571	rbm47	98	91.398	ENSOMEG00000010730	rbm47	63	91.398	Oryzias_melastigma
ENSGAFG00000020571	rbm47	98	81.867	ENSOGAG00000029367	-	63	83.200	Otolemur_garnettii
ENSGAFG00000020571	rbm47	98	75.532	ENSOGAG00000025193	-	64	76.862	Otolemur_garnettii
ENSGAFG00000020571	rbm47	98	70.479	ENSOARG00000012711	RBM47	61	71.809	Ovis_aries
ENSGAFG00000020571	rbm47	99	79.630	ENSPPAG00000029763	RBM47	96	82.632	Pan_paniscus
ENSGAFG00000020571	rbm47	98	81.383	ENSPPRG00000012873	RBM47	75	83.200	Panthera_pardus
ENSGAFG00000020571	rbm47	76	85.714	ENSPTIG00000017046	RBM47	59	86.014	Panthera_tigris_altaica
ENSGAFG00000020571	rbm47	99	79.630	ENSPTRG00000016006	RBM47	96	82.632	Pan_troglodytes
ENSGAFG00000020571	rbm47	98	80.533	ENSPANG00000005980	RBM47	95	83.511	Papio_anubis
ENSGAFG00000020571	rbm47	98	86.992	ENSPKIG00000013431	RBM47	67	86.992	Paramormyrops_kingsleyae
ENSGAFG00000020571	rbm47	94	89.014	ENSPKIG00000005037	rbm47	64	84.856	Paramormyrops_kingsleyae
ENSGAFG00000020571	rbm47	98	85.904	ENSPSIG00000017516	RBM47	69	85.904	Pelodiscus_sinensis
ENSGAFG00000020571	rbm47	98	91.375	ENSPMGG00000018540	rbm47	63	91.375	Periophthalmus_magnuspinnatus
ENSGAFG00000020571	rbm47	98	81.117	ENSPEMG00000011088	Rbm47	72	82.447	Peromyscus_maniculatus_bairdii
ENSGAFG00000020571	rbm47	98	93.846	ENSPFOG00000007997	rbm47	64	93.846	Poecilia_formosa
ENSGAFG00000020571	rbm47	98	99.185	ENSPLAG00000002072	rbm47	71	99.185	Poecilia_latipinna
ENSGAFG00000020571	rbm47	98	99.187	ENSPMEG00000017492	rbm47	72	93.830	Poecilia_mexicana
ENSGAFG00000020571	rbm47	98	99.185	ENSPREG00000008456	rbm47	71	99.185	Poecilia_reticulata
ENSGAFG00000020571	rbm47	93	74.157	ENSPPYG00000014688	RBM47	60	76.257	Pongo_abelii
ENSGAFG00000020571	rbm47	98	80.637	ENSPCAG00000011879	RBM47	64	83.554	Procavia_capensis
ENSGAFG00000020571	rbm47	98	80.267	ENSPCOG00000023451	RBM47	72	82.181	Propithecus_coquereli
ENSGAFG00000020571	rbm47	98	80.902	ENSPVAG00000003812	RBM47	63	82.493	Pteropus_vampyrus
ENSGAFG00000020571	rbm47	98	89.351	ENSPNYG00000022868	rbm47	63	89.351	Pundamilia_nyererei
ENSGAFG00000020571	rbm47	98	84.794	ENSPNAG00000007940	rbm47	65	85.013	Pygocentrus_nattereri
ENSGAFG00000020571	rbm47	98	81.383	ENSRNOG00000002408	Rbm47	64	82.713	Rattus_norvegicus
ENSGAFG00000020571	rbm47	98	81.915	ENSRBIG00000039601	RBM47	96	82.632	Rhinopithecus_bieti
ENSGAFG00000020571	rbm47	98	81.915	ENSRROG00000044696	RBM47	96	82.632	Rhinopithecus_roxellana
ENSGAFG00000020571	rbm47	98	82.447	ENSSBOG00000028475	RBM47	96	83.820	Saimiri_boliviensis_boliviensis
ENSGAFG00000020571	rbm47	98	84.267	ENSSHAG00000017576	RBM47	64	84.267	Sarcophilus_harrisii
ENSGAFG00000020571	rbm47	96	82.597	ENSSFOG00015024101	RBM47	61	82.597	Scleropages_formosus
ENSGAFG00000020571	rbm47	98	83.204	ENSSFOG00015012445	rbm47	71	83.161	Scleropages_formosus
ENSGAFG00000020571	rbm47	98	87.371	ENSSMAG00000009744	rbm47	73	87.339	Scophthalmus_maximus
ENSGAFG00000020571	rbm47	98	92.225	ENSSDUG00000022684	rbm47	63	92.225	Seriola_dumerili
ENSGAFG00000020571	rbm47	98	93.225	ENSSLDG00000003109	rbm47	73	87.786	Seriola_lalandi_dorsalis
ENSGAFG00000020571	rbm47	98	78.796	ENSSARG00000001735	RBM47	64	82.199	Sorex_araneus
ENSGAFG00000020571	rbm47	98	84.309	ENSSPUG00000007515	RBM47	72	84.309	Sphenodon_punctatus
ENSGAFG00000020571	rbm47	98	93.784	ENSSPAG00000001257	rbm47	72	89.487	Stegastes_partitus
ENSGAFG00000020571	rbm47	98	81.915	ENSSSCG00000008796	RBM47	64	83.511	Sus_scrofa
ENSGAFG00000020571	rbm47	98	83.820	ENSTGUG00000008705	RBM47	63	84.043	Taeniopygia_guttata
ENSGAFG00000020571	rbm47	98	93.225	ENSTRUG00000014050	rbm47	63	93.225	Takifugu_rubripes
ENSGAFG00000020571	rbm47	98	87.855	ENSTNIG00000006127	rbm47	64	87.855	Tetraodon_nigroviridis
ENSGAFG00000020571	rbm47	98	79.679	ENSTBEG00000001607	RBM47	62	81.793	Tupaia_belangeri
ENSGAFG00000020571	rbm47	98	81.698	ENSTTRG00000002839	RBM47	64	83.511	Tursiops_truncatus
ENSGAFG00000020571	rbm47	98	80.533	ENSUAMG00000021346	RBM47	64	83.200	Ursus_americanus
ENSGAFG00000020571	rbm47	93	84.746	ENSVVUG00000014774	RBM47	64	81.963	Vulpes_vulpes
ENSGAFG00000020571	rbm47	99	84.156	ENSXETG00000012802	rbm47	93	84.156	Xenopus_tropicalis
ENSGAFG00000020571	rbm47	98	99.457	ENSXCOG00000000780	rbm47	71	99.457	Xiphophorus_couchianus
ENSGAFG00000020571	rbm47	98	99.728	ENSXMAG00000009874	rbm47	72	94.087	Xiphophorus_maculatus