EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000020589 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 2044 bases
Position: chrNHOQ01000347.1:6863729-6865772
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000030555	MMR_HSR1	PF01926.23	7.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000030863	-	1971	-	ENSGAFP00000030555	557 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000020589	-	52	33.788	ENSGAFG00000015885	-	62	40.000
ENSGAFG00000020589	-	55	31.661	ENSGAFG00000000305	-	66	35.885
ENSGAFG00000020589	-	55	39.130	ENSGAFG00000015917	-	85	32.174
ENSGAFG00000020589	-	50	34.397	ENSGAFG00000017534	-	75	36.771
ENSGAFG00000020589	-	50	37.367	ENSGAFG00000001852	-	60	38.153

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020589	-	79	34.685	ENSAPOG00000001444	-	71	34.685	Acanthochromis_polyacanthus
ENSGAFG00000020589	-	93	54.702	ENSAPOG00000007181	-	99	53.283	Acanthochromis_polyacanthus
ENSGAFG00000020589	-	53	36.789	ENSACIG00000016635	-	89	41.176	Amphilophus_citrinellus
ENSGAFG00000020589	-	50	37.857	ENSACIG00000019149	-	75	39.921	Amphilophus_citrinellus
ENSGAFG00000020589	-	50	35.842	ENSACIG00000012714	-	70	38.571	Amphilophus_citrinellus
ENSGAFG00000020589	-	60	35.000	ENSACIG00000006484	-	94	35.714	Amphilophus_citrinellus
ENSGAFG00000020589	-	58	41.538	ENSACIG00000022222	-	81	42.578	Amphilophus_citrinellus
ENSGAFG00000020589	-	73	35.252	ENSATEG00000011341	-	50	35.012	Anabas_testudineus
ENSGAFG00000020589	-	52	31.935	ENSACLG00000001909	-	64	35.849	Astatotilapia_calliptera
ENSGAFG00000020589	-	62	37.714	ENSACLG00000005625	-	73	36.124	Astatotilapia_calliptera
ENSGAFG00000020589	-	52	40.136	ENSACLG00000005659	-	85	41.379	Astatotilapia_calliptera
ENSGAFG00000020589	-	61	36.390	ENSAMXG00000035548	-	73	35.072	Astyanax_mexicanus
ENSGAFG00000020589	-	54	32.308	ENSAMXG00000035963	-	76	35.808	Astyanax_mexicanus
ENSGAFG00000020589	-	84	32.593	ENSAMXG00000043838	-	72	32.593	Astyanax_mexicanus
ENSGAFG00000020589	-	52	34.722	ENSAMXG00000031962	-	70	38.318	Astyanax_mexicanus
ENSGAFG00000020589	-	59	32.743	ENSAMXG00000039994	-	88	32.157	Astyanax_mexicanus
ENSGAFG00000020589	-	97	78.821	ENSCVAG00000006929	-	100	78.821	Cyprinodon_variegatus
ENSGAFG00000020589	-	64	33.422	ENSCVAG00000003593	-	76	31.501	Cyprinodon_variegatus
ENSGAFG00000020589	-	62	35.072	ENSDARG00000087012	BX004816.2	62	35.942	Danio_rerio
ENSGAFG00000020589	-	51	36.301	ENSDARG00000052876	CR933791.2	64	40.930	Danio_rerio
ENSGAFG00000020589	-	54	34.098	ENSELUG00000007650	-	68	36.667	Esox_lucius
ENSGAFG00000020589	-	53	41.837	ENSFHEG00000013922	-	67	42.063	Fundulus_heteroclitus
ENSGAFG00000020589	-	72	53.980	ENSGACG00000016194	-	99	51.741	Gasterosteus_aculeatus
ENSGAFG00000020589	-	62	37.746	ENSHBUG00000011703	-	73	34.977	Haplochromis_burtoni
ENSGAFG00000020589	-	51	37.716	ENSHBUG00000003045	-	73	40.081	Haplochromis_burtoni
ENSGAFG00000020589	-	50	42.238	ENSHBUG00000007182	-	72	43.028	Haplochromis_burtoni
ENSGAFG00000020589	-	50	39.858	ENSHBUG00000016739	-	69	42.982	Haplochromis_burtoni
ENSGAFG00000020589	-	94	46.080	ENSHCOG00000000067	-	98	46.080	Hippocampus_comes
ENSGAFG00000020589	-	52	34.364	ENSIPUG00000000891	-	77	34.646	Ictalurus_punctatus
ENSGAFG00000020589	-	55	34.049	ENSIPUG00000023842	-	71	30.485	Ictalurus_punctatus
ENSGAFG00000020589	-	53	35.593	ENSIPUG00000000908	-	73	36.330	Ictalurus_punctatus
ENSGAFG00000020589	-	52	32.095	ENSIPUG00000007173	si:ch1073-185p12.2	55	35.749	Ictalurus_punctatus
ENSGAFG00000020589	-	53	30.375	ENSIPUG00000009955	-	74	32.663	Ictalurus_punctatus
ENSGAFG00000020589	-	51	70.979	ENSKMAG00000000074	-	88	71.863	Kryptolebias_marmoratus
ENSGAFG00000020589	-	55	35.621	ENSKMAG00000010832	-	81	35.336	Kryptolebias_marmoratus
ENSGAFG00000020589	-	54	37.742	ENSLBEG00000004167	-	80	39.076	Labrus_bergylta
ENSGAFG00000020589	-	51	36.145	ENSLBEG00000017905	-	83	44.974	Labrus_bergylta
ENSGAFG00000020589	-	50	34.641	ENSLOCG00000002945	-	68	34.641	Lepisosteus_oculatus
ENSGAFG00000020589	-	51	58.703	ENSMAMG00000020006	-	92	52.063	Mastacembelus_armatus
ENSGAFG00000020589	-	50	34.173	ENSMAMG00000012570	-	80	42.636	Mastacembelus_armatus
ENSGAFG00000020589	-	50	41.877	ENSMZEG00005020792	-	76	48.529	Maylandia_zebra
ENSGAFG00000020589	-	50	41.877	ENSMZEG00005016562	-	75	48.259	Maylandia_zebra
ENSGAFG00000020589	-	60	36.905	ENSMZEG00005021247	-	63	40.000	Maylandia_zebra
ENSGAFG00000020589	-	51	39.932	ENSMZEG00005027854	-	81	39.924	Maylandia_zebra
ENSGAFG00000020589	-	50	35.252	ENSMZEG00005026687	-	78	35.714	Maylandia_zebra
ENSGAFG00000020589	-	59	37.015	ENSMALG00000008656	-	60	34.014	Monopterus_albus
ENSGAFG00000020589	-	55	36.050	ENSNBRG00000005934	-	80	37.634	Neolamprologus_brichardi
ENSGAFG00000020589	-	58	33.433	ENSNBRG00000023111	-	70	40.654	Neolamprologus_brichardi
ENSGAFG00000020589	-	60	36.499	ENSNBRG00000005951	-	61	42.723	Neolamprologus_brichardi
ENSGAFG00000020589	-	51	43.007	ENSNBRG00000004025	-	82	47.032	Neolamprologus_brichardi
ENSGAFG00000020589	-	71	43.284	ENSONIG00000012313	-	95	43.333	Oreochromis_niloticus
ENSGAFG00000020589	-	54	34.333	ENSONIG00000013605	-	89	36.015	Oreochromis_niloticus
ENSGAFG00000020589	-	52	38.356	ENSONIG00000014258	-	78	39.382	Oreochromis_niloticus
ENSGAFG00000020589	-	52	38.435	ENSONIG00000000240	-	91	39.405	Oreochromis_niloticus
ENSGAFG00000020589	-	50	34.420	ENSONIG00000007408	-	80	34.252	Oreochromis_niloticus
ENSGAFG00000020589	-	97	63.080	ENSORLG00000026303	-	100	63.080	Oryzias_latipes
ENSGAFG00000020589	-	97	63.080	ENSORLG00020005613	-	100	63.080	Oryzias_latipes_hni
ENSGAFG00000020589	-	97	63.080	ENSORLG00015003237	-	100	63.080	Oryzias_latipes_hsok
ENSGAFG00000020589	-	51	36.735	ENSPMGG00000024067	-	81	39.130	Periophthalmus_magnuspinnatus
ENSGAFG00000020589	-	61	36.982	ENSPFOG00000000432	-	87	38.154	Poecilia_formosa
ENSGAFG00000020589	-	72	72.139	ENSPFOG00000009457	-	99	71.891	Poecilia_formosa
ENSGAFG00000020589	-	56	39.274	ENSPFOG00000000263	-	82	38.973	Poecilia_formosa
ENSGAFG00000020589	-	61	35.632	ENSPLAG00000003471	-	54	43.284	Poecilia_latipinna
ENSGAFG00000020589	-	55	39.423	ENSPREG00000016801	-	90	39.423	Poecilia_reticulata
ENSGAFG00000020589	-	50	38.078	ENSPNYG00000004179	-	76	38.577	Pundamilia_nyererei
ENSGAFG00000020589	-	61	35.838	ENSPNYG00000004123	-	58	44.554	Pundamilia_nyererei
ENSGAFG00000020589	-	51	40.283	ENSPNYG00000024199	-	74	47.692	Pundamilia_nyererei
ENSGAFG00000020589	-	50	33.451	ENSPNYG00000023532	-	87	34.555	Pundamilia_nyererei
ENSGAFG00000020589	-	51	35.599	ENSPNAG00000008987	-	76	35.274	Pygocentrus_nattereri
ENSGAFG00000020589	-	61	33.626	ENSPNAG00000026043	-	74	31.422	Pygocentrus_nattereri
ENSGAFG00000020589	-	62	35.928	ENSPNAG00000025951	-	66	32.333	Pygocentrus_nattereri
ENSGAFG00000020589	-	66	36.364	ENSPNAG00000004032	-	62	34.703	Pygocentrus_nattereri
ENSGAFG00000020589	-	65	33.524	ENSPNAG00000025977	-	68	32.719	Pygocentrus_nattereri
ENSGAFG00000020589	-	62	35.329	ENSPNAG00000026004	-	63	32.333	Pygocentrus_nattereri
ENSGAFG00000020589	-	63	36.723	ENSPNAG00000025944	-	64	32.783	Pygocentrus_nattereri
ENSGAFG00000020589	-	52	34.812	ENSPNAG00000025964	-	79	31.746	Pygocentrus_nattereri
ENSGAFG00000020589	-	63	34.819	ENSPNAG00000026220	-	88	32.658	Pygocentrus_nattereri
ENSGAFG00000020589	-	51	33.803	ENSPNAG00000014658	-	71	36.245	Pygocentrus_nattereri
ENSGAFG00000020589	-	76	30.282	ENSSFOG00015006469	-	56	35.052	Scleropages_formosus
ENSGAFG00000020589	-	81	32.895	ENSSMAG00000012958	-	58	33.333	Scophthalmus_maximus
ENSGAFG00000020589	-	53	34.667	ENSSLDG00000001623	-	94	36.502	Seriola_lalandi_dorsalis
ENSGAFG00000020589	-	50	40.702	ENSSLDG00000006746	-	87	44.898	Seriola_lalandi_dorsalis
ENSGAFG00000020589	-	50	35.870	ENSSLDG00000013116	-	76	39.535	Seriola_lalandi_dorsalis