EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000020794 (Gene tree)
Gene ID: -
Gene Symbol: rsl1d1
Alias: si:dkey-16i5.10
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6603 bases
Position: chrNHOQ01001879.1:1900524-1907126
Accession: ZDB-GENE-130603-67
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000030849	Ribosomal_L1	PF00687.21	2.4e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000031162	-	3370	-	ENSGAFP00000030849	375 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020794's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020794	rsl1d1	82	39.385	ENSG00000171490	RSL1D1	100	56.122	Homo_sapiens
ENSGAFG00000020794	rsl1d1	94	64.208	ENSAPOG00000004544	rsl1d1	99	63.904	Acanthochromis_polyacanthus
ENSGAFG00000020794	rsl1d1	67	45.817	ENSAMEG00000009570	RSL1D1	50	45.817	Ailuropoda_melanoleuca
ENSGAFG00000020794	rsl1d1	85	64.688	ENSACIG00000006608	rsl1d1	96	64.688	Amphilophus_citrinellus
ENSGAFG00000020794	rsl1d1	94	65.460	ENSAOCG00000001548	rsl1d1	99	65.123	Amphiprion_ocellaris
ENSGAFG00000020794	rsl1d1	94	65.460	ENSAPEG00000003334	rsl1d1	99	65.123	Amphiprion_percula
ENSGAFG00000020794	rsl1d1	81	64.724	ENSATEG00000009247	rsl1d1	99	62.467	Anabas_testudineus
ENSGAFG00000020794	rsl1d1	65	56.612	ENSAPLG00000004451	RSL1D1	54	56.612	Anas_platyrhynchos
ENSGAFG00000020794	rsl1d1	80	40.237	ENSANAG00000028185	-	72	38.938	Aotus_nancymaae
ENSGAFG00000020794	rsl1d1	90	65.418	ENSACLG00000017535	rsl1d1	96	64.553	Astatotilapia_calliptera
ENSGAFG00000020794	rsl1d1	87	53.488	ENSAMXG00000008624	rsl1d1	98	50.267	Astyanax_mexicanus
ENSGAFG00000020794	rsl1d1	64	48.954	ENSBTAG00000014588	RSL1D1	50	48.954	Bos_taurus
ENSGAFG00000020794	rsl1d1	75	45.000	ENSCJAG00000042606	-	50	47.500	Callithrix_jacchus
ENSGAFG00000020794	rsl1d1	75	45.000	ENSCJAG00000008375	-	50	47.500	Callithrix_jacchus
ENSGAFG00000020794	rsl1d1	80	40.227	ENSCAFG00000018865	RSL1D1	51	47.012	Canis_familiaris
ENSGAFG00000020794	rsl1d1	80	41.349	ENSCAFG00020024488	-	50	48.117	Canis_lupus_dingo
ENSGAFG00000020794	rsl1d1	90	41.926	ENSCHIG00000009867	-	55	49.372	Capra_hircus
ENSGAFG00000020794	rsl1d1	75	43.617	ENSTSYG00000009276	RSL1D1	53	45.420	Carlito_syrichta
ENSGAFG00000020794	rsl1d1	68	45.000	ENSCPOG00000010630	RSL1D1	55	45.000	Cavia_porcellus
ENSGAFG00000020794	rsl1d1	64	42.083	ENSCCAG00000025197	-	52	42.083	Cebus_capucinus
ENSGAFG00000020794	rsl1d1	80	38.973	ENSCCAG00000031641	-	51	42.917	Cebus_capucinus
ENSGAFG00000020794	rsl1d1	78	40.469	ENSCATG00000031153	RSL1D1	56	46.667	Cercocebus_atys
ENSGAFG00000020794	rsl1d1	64	47.917	ENSCLAG00000010975	RSL1D1	55	46.388	Chinchilla_lanigera
ENSGAFG00000020794	rsl1d1	65	54.545	ENSCPBG00000004564	RSL1D1	93	54.762	Chrysemys_picta_bellii
ENSGAFG00000020794	rsl1d1	61	34.649	ENSCING00000011810	-	100	34.649	Ciona_intestinalis
ENSGAFG00000020794	rsl1d1	77	31.741	ENSCSAVG00000011797	-	79	31.227	Ciona_savignyi
ENSGAFG00000020794	rsl1d1	78	40.407	ENSCANG00000029202	RSL1D1	51	46.667	Colobus_angolensis_palliatus
ENSGAFG00000020794	rsl1d1	63	47.881	ENSCGRG00001014989	Rsl1d1	53	47.881	Cricetulus_griseus_chok1gshd
ENSGAFG00000020794	rsl1d1	63	47.881	ENSCGRG00000001905	Rsl1d1	53	47.881	Cricetulus_griseus_crigri
ENSGAFG00000020794	rsl1d1	83	62.805	ENSCSEG00000019693	rsl1d1	99	61.141	Cynoglossus_semilaevis
ENSGAFG00000020794	rsl1d1	96	69.722	ENSCVAG00000000672	rsl1d1	99	70.556	Cyprinodon_variegatus
ENSGAFG00000020794	rsl1d1	86	58.462	ENSDARG00000055868	rsl1d1	87	56.575	Danio_rerio
ENSGAFG00000020794	rsl1d1	64	47.107	ENSEBUG00000005400	-	58	47.107	Eptatretus_burgeri
ENSGAFG00000020794	rsl1d1	67	47.809	ENSEASG00005011499	RSL1D1	50	47.809	Equus_asinus_asinus
ENSGAFG00000020794	rsl1d1	67	48.207	ENSECAG00000025036	RSL1D1	50	48.207	Equus_caballus
ENSGAFG00000020794	rsl1d1	90	62.242	ENSELUG00000019243	rsl1d1	96	61.078	Esox_lucius
ENSGAFG00000020794	rsl1d1	66	55.242	ENSFALG00000003869	RSL1D1	51	55.242	Ficedula_albicollis
ENSGAFG00000020794	rsl1d1	81	40.058	ENSFDAG00000011414	RSL1D1	54	47.917	Fukomys_damarensis
ENSGAFG00000020794	rsl1d1	100	65.691	ENSFHEG00000017235	rsl1d1	99	67.287	Fundulus_heteroclitus
ENSGAFG00000020794	rsl1d1	82	56.958	ENSGMOG00000013048	rsl1d1	99	55.663	Gadus_morhua
ENSGAFG00000020794	rsl1d1	85	47.041	ENSGALG00000033690	RSL1D1	60	55.094	Gallus_gallus
ENSGAFG00000020794	rsl1d1	88	59.819	ENSGACG00000004483	rsl1d1	92	59.036	Gasterosteus_aculeatus
ENSGAFG00000020794	rsl1d1	90	65.698	ENSHBUG00000001551	rsl1d1	97	63.611	Haplochromis_burtoni
ENSGAFG00000020794	rsl1d1	64	47.500	ENSHGLG00000006774	RSL1D1	54	47.500	Heterocephalus_glaber_female
ENSGAFG00000020794	rsl1d1	64	47.500	ENSHGLG00100017781	RSL1D1	54	47.500	Heterocephalus_glaber_male
ENSGAFG00000020794	rsl1d1	82	58.991	ENSHCOG00000015208	rsl1d1	88	55.623	Hippocampus_comes
ENSGAFG00000020794	rsl1d1	95	52.589	ENSIPUG00000001677	rsl1d1	96	51.771	Ictalurus_punctatus
ENSGAFG00000020794	rsl1d1	79	38.720	ENSJJAG00000012115	Rsl1d1	55	43.874	Jaculus_jaculus
ENSGAFG00000020794	rsl1d1	96	62.567	ENSKMAG00000021908	rsl1d1	99	64.365	Kryptolebias_marmoratus
ENSGAFG00000020794	rsl1d1	82	66.667	ENSLBEG00000001076	rsl1d1	100	61.453	Labrus_bergylta
ENSGAFG00000020794	rsl1d1	92	51.524	ENSLOCG00000007416	rsl1d1	84	51.955	Lepisosteus_oculatus
ENSGAFG00000020794	rsl1d1	86	38.859	ENSLAFG00000013664	RSL1D1	53	45.200	Loxodonta_africana
ENSGAFG00000020794	rsl1d1	78	40.643	ENSMMUG00000019632	RSL1D1	99	53.503	Macaca_mulatta
ENSGAFG00000020794	rsl1d1	78	41.056	ENSMLEG00000042058	RSL1D1	70	39.823	Mandrillus_leucophaeus
ENSGAFG00000020794	rsl1d1	94	65.952	ENSMAMG00000004385	rsl1d1	99	66.940	Mastacembelus_armatus
ENSGAFG00000020794	rsl1d1	90	65.706	ENSMZEG00005007150	rsl1d1	96	64.841	Maylandia_zebra
ENSGAFG00000020794	rsl1d1	78	48.254	ENSMGAG00000000863	RSL1D1	75	45.897	Meleagris_gallopavo
ENSGAFG00000020794	rsl1d1	81	41.714	ENSMICG00000008229	RSL1D1	53	45.594	Microcebus_murinus
ENSGAFG00000020794	rsl1d1	86	55.963	ENSMMOG00000003730	rsl1d1	100	60.333	Mola_mola
ENSGAFG00000020794	rsl1d1	86	39.403	ENSMODG00000029494	-	64	42.705	Monodelphis_domestica
ENSGAFG00000020794	rsl1d1	79	43.027	ENSMODG00000004625	-	54	49.590	Monodelphis_domestica
ENSGAFG00000020794	rsl1d1	94	63.102	ENSMALG00000009531	rsl1d1	99	64.324	Monopterus_albus
ENSGAFG00000020794	rsl1d1	86	40.669	ENSMUSG00000005846	Rsl1d1	52	47.458	Mus_musculus
ENSGAFG00000020794	rsl1d1	78	41.212	MGP_PahariEiJ_G0016164	Rsl1d1	52	47.458	Mus_pahari
ENSGAFG00000020794	rsl1d1	86	40.390	MGP_SPRETEiJ_G0021352	Rsl1d1	52	47.458	Mus_spretus
ENSGAFG00000020794	rsl1d1	84	38.310	ENSNGAG00000009086	-	51	44.492	Nannospalax_galili
ENSGAFG00000020794	rsl1d1	84	36.842	ENSNGAG00000013578	-	56	41.176	Nannospalax_galili
ENSGAFG00000020794	rsl1d1	93	63.989	ENSNBRG00000002777	rsl1d1	98	64.208	Neolamprologus_brichardi
ENSGAFG00000020794	rsl1d1	78	39.942	ENSNLEG00000012149	-	63	46.250	Nomascus_leucogenys
ENSGAFG00000020794	rsl1d1	84	43.881	ENSOPRG00000004442	-	74	43.881	Ochotona_princeps
ENSGAFG00000020794	rsl1d1	87	65.976	ENSONIG00000019757	rsl1d1	96	66.272	Oreochromis_niloticus
ENSGAFG00000020794	rsl1d1	76	45.105	ENSOANG00000009408	-	57	49.174	Ornithorhynchus_anatinus
ENSGAFG00000020794	rsl1d1	66	48.374	ENSOCUG00000004751	RSL1D1	52	48.374	Oryctolagus_cuniculus
ENSGAFG00000020794	rsl1d1	94	61.582	ENSORLG00000002877	rsl1d1	98	61.389	Oryzias_latipes
ENSGAFG00000020794	rsl1d1	94	61.017	ENSORLG00020006636	rsl1d1	98	60.833	Oryzias_latipes_hni
ENSGAFG00000020794	rsl1d1	94	61.017	ENSORLG00015005427	rsl1d1	98	60.833	Oryzias_latipes_hsok
ENSGAFG00000020794	rsl1d1	98	61.789	ENSOMEG00000008036	rsl1d1	98	61.662	Oryzias_melastigma
ENSGAFG00000020794	rsl1d1	65	48.148	ENSOGAG00000015151	RSL1D1	50	48.148	Otolemur_garnettii
ENSGAFG00000020794	rsl1d1	64	48.536	ENSOARG00000006923	RSL1D1	50	48.536	Ovis_aries
ENSGAFG00000020794	rsl1d1	82	41.143	ENSPTIG00000005526	RSL1D1	52	46.559	Panthera_tigris_altaica
ENSGAFG00000020794	rsl1d1	96	49.067	ENSPKIG00000022687	rsl1d1	99	48.267	Paramormyrops_kingsleyae
ENSGAFG00000020794	rsl1d1	81	45.921	ENSPSIG00000011642	RSL1D1	74	45.115	Pelodiscus_sinensis
ENSGAFG00000020794	rsl1d1	80	64.706	ENSPMGG00000022261	rsl1d1	100	64.356	Periophthalmus_magnuspinnatus
ENSGAFG00000020794	rsl1d1	63	48.305	ENSPEMG00000009523	Rsl1d1	52	48.305	Peromyscus_maniculatus_bairdii
ENSGAFG00000020794	rsl1d1	56	48.113	ENSPMAG00000005446	rsl1d1	67	40.000	Petromyzon_marinus
ENSGAFG00000020794	rsl1d1	98	42.819	ENSPCIG00000026851	-	94	42.819	Phascolarctos_cinereus
ENSGAFG00000020794	rsl1d1	80	85.284	ENSPFOG00000005017	rsl1d1	78	86.316	Poecilia_formosa
ENSGAFG00000020794	rsl1d1	100	82.768	ENSPLAG00000000482	rsl1d1	90	81.365	Poecilia_latipinna
ENSGAFG00000020794	rsl1d1	100	83.200	ENSPMEG00000007032	rsl1d1	100	82.667	Poecilia_mexicana
ENSGAFG00000020794	rsl1d1	94	74.868	ENSPREG00000016619	rsl1d1	96	75.397	Poecilia_reticulata
ENSGAFG00000020794	rsl1d1	86	37.960	ENSPPYG00000019335	-	53	44.915	Pongo_abelii
ENSGAFG00000020794	rsl1d1	75	40.780	ENSPCOG00000022456	RSL1D1	67	41.264	Propithecus_coquereli
ENSGAFG00000020794	rsl1d1	64	47.699	ENSPVAG00000005014	RSL1D1	50	47.699	Pteropus_vampyrus
ENSGAFG00000020794	rsl1d1	87	66.667	ENSPNYG00000002850	rsl1d1	98	64.426	Pundamilia_nyererei
ENSGAFG00000020794	rsl1d1	87	54.599	ENSPNAG00000011848	rsl1d1	97	52.459	Pygocentrus_nattereri
ENSGAFG00000020794	rsl1d1	80	40.533	ENSRNOG00000061236	LOC108348298	51	48.117	Rattus_norvegicus
ENSGAFG00000020794	rsl1d1	80	40.533	ENSRNOG00000048608	Rsl1d1l1	51	48.117	Rattus_norvegicus
ENSGAFG00000020794	rsl1d1	80	38.068	ENSSBOG00000028384	-	52	40.996	Saimiri_boliviensis_boliviensis
ENSGAFG00000020794	rsl1d1	96	50.409	ENSSFOG00015011354	rsl1d1	74	61.240	Scleropages_formosus
ENSGAFG00000020794	rsl1d1	78	69.759	ENSSMAG00000007957	rsl1d1	93	65.976	Scophthalmus_maximus
ENSGAFG00000020794	rsl1d1	95	66.304	ENSSDUG00000008447	rsl1d1	92	65.123	Seriola_dumerili
ENSGAFG00000020794	rsl1d1	96	66.216	ENSSLDG00000008293	rsl1d1	99	66.940	Seriola_lalandi_dorsalis
ENSGAFG00000020794	rsl1d1	79	47.239	ENSSPUG00000007525	RSL1D1	54	54.878	Sphenodon_punctatus
ENSGAFG00000020794	rsl1d1	96	61.905	ENSSPAG00000009755	rsl1d1	99	63.228	Stegastes_partitus
ENSGAFG00000020794	rsl1d1	84	40.548	ENSSSCG00000023984	RSL1D1	74	40.000	Sus_scrofa
ENSGAFG00000020794	rsl1d1	64	56.017	ENSTGUG00000005174	RSL1D1	98	56.017	Taeniopygia_guttata
ENSGAFG00000020794	rsl1d1	97	59.563	ENSTRUG00000016970	rsl1d1	100	59.836	Takifugu_rubripes
ENSGAFG00000020794	rsl1d1	96	60.322	ENSTNIG00000012925	rsl1d1	100	59.459	Tetraodon_nigroviridis
ENSGAFG00000020794	rsl1d1	64	50.209	ENSTTRG00000011629	RSL1D1	50	50.209	Tursiops_truncatus
ENSGAFG00000020794	rsl1d1	95	38.539	ENSUAMG00000004470	RSL1D1	51	49.000	Ursus_americanus
ENSGAFG00000020794	rsl1d1	80	40.227	ENSVVUG00000018170	-	51	47.012	Vulpes_vulpes
ENSGAFG00000020794	rsl1d1	95	35.484	ENSVVUG00000024962	-	53	41.221	Vulpes_vulpes
ENSGAFG00000020794	rsl1d1	82	50.000	ENSXETG00000033365	-	73	50.000	Xenopus_tropicalis
ENSGAFG00000020794	rsl1d1	66	90.506	ENSXCOG00000003117	rsl1d1	100	90.506	Xiphophorus_couchianus
ENSGAFG00000020794	rsl1d1	71	94.286	ENSXMAG00000025111	rsl1d1	82	94.286	Xiphophorus_maculatus