EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000020972 (Gene tree)
Gene ID: -
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 12893 bases
Position: chrNHOQ01000466.1:2919837-2932729
Accession: ZDB-GENE-040426-2159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000031104	KH_1	PF00013.29	4.3e-68	1	4
ENSGAFP00000031104	KH_1	PF00013.29	4.3e-68	2	4
ENSGAFP00000031104	KH_1	PF00013.29	4.3e-68	3	4
ENSGAFP00000031104	KH_1	PF00013.29	4.3e-68	4	4
ENSGAFP00000031103	KH_1	PF00013.29	5.3e-68	1	4
ENSGAFP00000031103	KH_1	PF00013.29	5.3e-68	2	4
ENSGAFP00000031103	KH_1	PF00013.29	5.3e-68	3	4
ENSGAFP00000031103	KH_1	PF00013.29	5.3e-68	4	4
ENSGAFP00000031105	KH_1	PF00013.29	4.3e-67	1	4
ENSGAFP00000031105	KH_1	PF00013.29	4.3e-67	2	4
ENSGAFP00000031105	KH_1	PF00013.29	4.3e-67	3	4
ENSGAFP00000031105	KH_1	PF00013.29	4.3e-67	4	4
ENSGAFP00000031105	KH_2	PF07650.17	9.3e-21	1	1
ENSGAFP00000031104	KH_2	PF07650.17	1.5e-20	1	1
ENSGAFP00000031103	KH_2	PF07650.17	1.8e-20	1	1
ENSGAFP00000031103	DUF1897	PF09005.10	2.9e-16	1	2
ENSGAFP00000031103	DUF1897	PF09005.10	2.9e-16	2	2
ENSGAFP00000031105	DUF1897	PF09005.10	4.6e-12	1	1
ENSGAFP00000031104	DUF1897	PF09005.10	4.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000031419	-	3745	-	ENSGAFP00000031104	640 (aa)	-	-
ENSGAFT00000031418	-	4471	-	ENSGAFP00000031103	665 (aa)	-	-
ENSGAFT00000031420	-	1809	-	ENSGAFP00000031105	602 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020972's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000020972	fubp1	60	41.250	ENSGAFG00000007972	pcbp2	96	41.250
ENSGAFG00000020972	fubp1	56	32.258	ENSGAFG00000017992	igf2bp3	56	32.258
ENSGAFG00000020972	fubp1	53	38.571	ENSGAFG00000010274	-	73	38.571
ENSGAFG00000020972	fubp1	97	53.083	ENSGAFG00000010469	khsrp	97	51.542
ENSGAFG00000020972	fubp1	54	32.215	ENSGAFG00000017864	zgc:110045	64	32.215
ENSGAFG00000020972	fubp1	59	41.667	ENSGAFG00000013273	PCBP2	71	41.667
ENSGAFG00000020972	fubp1	97	47.438	ENSGAFG00000010840	FUBP3	94	49.030
ENSGAFG00000020972	fubp1	54	37.143	ENSGAFG00000011430	pcbp3	68	36.000
ENSGAFG00000020972	fubp1	89	51.613	ENSGAFG00000019255	-	94	50.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020972	fubp1	91	77.727	ENSG00000162613	FUBP1	100	69.910	Homo_sapiens
ENSGAFG00000020972	fubp1	99	89.181	ENSAPOG00000014845	fubp1	98	89.026	Acanthochromis_polyacanthus
ENSGAFG00000020972	fubp1	91	73.922	ENSAMEG00000007372	FUBP1	100	69.265	Ailuropoda_melanoleuca
ENSGAFG00000020972	fubp1	100	88.354	ENSACIG00000020024	fubp1	100	87.422	Amphilophus_citrinellus
ENSGAFG00000020972	fubp1	100	89.130	ENSAPEG00000012232	fubp1	100	87.654	Amphiprion_percula
ENSGAFG00000020972	fubp1	100	93.835	ENSATEG00000018619	fubp1	100	93.835	Anabas_testudineus
ENSGAFG00000020972	fubp1	86	79.750	ENSAPLG00000005965	FUBP1	100	71.014	Anas_platyrhynchos
ENSGAFG00000020972	fubp1	91	73.261	ENSACAG00000006310	FUBP1	96	69.086	Anolis_carolinensis
ENSGAFG00000020972	fubp1	100	93.083	ENSACLG00000006708	fubp1	100	92.782	Astatotilapia_calliptera
ENSGAFG00000020972	fubp1	85	85.045	ENSAMXG00000005525	fubp1	99	84.270	Astyanax_mexicanus
ENSGAFG00000020972	fubp1	91	77.955	ENSCJAG00000007062	FUBP1	100	70.287	Callithrix_jacchus
ENSGAFG00000020972	fubp1	91	77.778	ENSCAFG00000020361	FUBP1	100	70.060	Canis_familiaris
ENSGAFG00000020972	fubp1	86	81.026	ENSTSYG00000000148	FUBP1	100	70.223	Carlito_syrichta
ENSGAFG00000020972	fubp1	64	76.573	ENSCAPG00000011052	-	65	84.677	Cavia_aperea
ENSGAFG00000020972	fubp1	91	77.098	ENSCPOG00000002757	FUBP1	98	70.946	Cavia_porcellus
ENSGAFG00000020972	fubp1	91	63.584	ENSCCAG00000036537	FUBP1	100	63.873	Cebus_capucinus
ENSGAFG00000020972	fubp1	91	77.551	ENSCATG00000042126	FUBP1	100	69.910	Cercocebus_atys
ENSGAFG00000020972	fubp1	91	77.598	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSGAFG00000020972	fubp1	91	77.551	ENSCSAG00000001402	FUBP1	100	69.910	Chlorocebus_sabaeus
ENSGAFG00000020972	fubp1	91	77.551	ENSCHOG00000008177	FUBP1	98	70.015	Choloepus_hoffmanni
ENSGAFG00000020972	fubp1	91	78.899	ENSCGRG00001007103	Fubp1	100	70.420	Cricetulus_griseus_chok1gshd
ENSGAFG00000020972	fubp1	86	79.551	ENSCGRG00000003372	Fubp1	100	70.206	Cricetulus_griseus_crigri
ENSGAFG00000020972	fubp1	100	92.188	ENSCSEG00000021412	fubp1	98	91.562	Cynoglossus_semilaevis
ENSGAFG00000020972	fubp1	99	95.928	ENSCVAG00000014487	fubp1	99	95.928	Cyprinodon_variegatus
ENSGAFG00000020972	fubp1	100	79.678	ENSDARG00000029248	fubp1	100	81.725	Danio_rerio
ENSGAFG00000020972	fubp1	99	56.410	ENSDNOG00000034565	-	87	49.528	Dasypus_novemcinctus
ENSGAFG00000020972	fubp1	91	76.871	ENSDORG00000016534	Fubp1	98	70.015	Dipodomys_ordii
ENSGAFG00000020972	fubp1	78	76.608	ENSETEG00000000948	-	53	76.901	Echinops_telfairi
ENSGAFG00000020972	fubp1	68	64.706	ENSEBUG00000016143	fubp1	63	66.667	Eptatretus_burgeri
ENSGAFG00000020972	fubp1	74	84.452	ENSEEUG00000001287	FUBP1	87	65.173	Erinaceus_europaeus
ENSGAFG00000020972	fubp1	100	83.410	ENSELUG00000007990	fubp1	100	83.728	Esox_lucius
ENSGAFG00000020972	fubp1	91	78.539	ENSFALG00000005768	FUBP1	97	70.713	Ficedula_albicollis
ENSGAFG00000020972	fubp1	91	76.871	ENSFDAG00000014210	FUBP1	100	70.270	Fukomys_damarensis
ENSGAFG00000020972	fubp1	100	96.692	ENSFHEG00000005230	fubp1	100	96.692	Fundulus_heteroclitus
ENSGAFG00000020972	fubp1	100	83.127	ENSGMOG00000003370	fubp1	100	82.508	Gadus_morhua
ENSGAFG00000020972	fubp1	91	79.043	ENSGALG00000008939	FUBP1	100	71.450	Gallus_gallus
ENSGAFG00000020972	fubp1	100	89.077	ENSGACG00000016563	fubp1	100	88.462	Gasterosteus_aculeatus
ENSGAFG00000020972	fubp1	100	93.684	ENSHBUG00000009835	fubp1	100	93.083	Haplochromis_burtoni
ENSGAFG00000020972	fubp1	91	77.098	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSGAFG00000020972	fubp1	100	64.625	ENSHGLG00000002808	-	100	62.150	Heterocephalus_glaber_female
ENSGAFG00000020972	fubp1	91	77.098	ENSHGLG00100003417	-	100	69.104	Heterocephalus_glaber_male
ENSGAFG00000020972	fubp1	100	65.084	ENSHGLG00100001414	-	100	62.773	Heterocephalus_glaber_male
ENSGAFG00000020972	fubp1	100	92.403	ENSHCOG00000000910	fubp1	100	92.868	Hippocampus_comes
ENSGAFG00000020972	fubp1	100	82.116	ENSIPUG00000009896	fubp1	100	83.159	Ictalurus_punctatus
ENSGAFG00000020972	fubp1	91	80.235	ENSSTOG00000014312	FUBP1	100	70.060	Ictidomys_tridecemlineatus
ENSGAFG00000020972	fubp1	91	79.582	ENSJJAG00000020069	Fubp1	100	70.270	Jaculus_jaculus
ENSGAFG00000020972	fubp1	100	94.910	ENSKMAG00000018897	fubp1	100	94.910	Kryptolebias_marmoratus
ENSGAFG00000020972	fubp1	99	93.881	ENSLBEG00000012700	fubp1	97	94.030	Labrus_bergylta
ENSGAFG00000020972	fubp1	97	80.572	ENSLOCG00000003745	fubp1	99	79.295	Lepisosteus_oculatus
ENSGAFG00000020972	fubp1	91	74.565	ENSLAFG00000003273	FUBP1	99	72.679	Loxodonta_africana
ENSGAFG00000020972	fubp1	91	77.727	ENSMFAG00000031825	FUBP1	100	70.136	Macaca_fascicularis
ENSGAFG00000020972	fubp1	91	80.000	ENSMMUG00000002899	FUBP1	100	69.910	Macaca_mulatta
ENSGAFG00000020972	fubp1	91	77.551	ENSMNEG00000045212	FUBP1	100	69.910	Macaca_nemestrina
ENSGAFG00000020972	fubp1	99	95.023	ENSMAMG00000007489	fubp1	99	94.419	Mastacembelus_armatus
ENSGAFG00000020972	fubp1	100	93.534	ENSMZEG00005024298	fubp1	100	92.932	Maylandia_zebra
ENSGAFG00000020972	fubp1	86	79.800	ENSMGAG00000009424	FUBP1	100	71.314	Meleagris_gallopavo
ENSGAFG00000020972	fubp1	91	78.005	ENSMAUG00000016428	Fubp1	98	70.946	Mesocricetus_auratus
ENSGAFG00000020972	fubp1	91	80.235	ENSMOCG00000014751	Fubp1	100	70.320	Microtus_ochrogaster
ENSGAFG00000020972	fubp1	85	91.803	ENSMMOG00000019463	fubp1	99	90.710	Mola_mola
ENSGAFG00000020972	fubp1	88	71.132	ENSMODG00000020804	FUBP1	100	65.749	Monodelphis_domestica
ENSGAFG00000020972	fubp1	100	93.684	ENSMALG00000015173	fubp1	100	93.083	Monopterus_albus
ENSGAFG00000020972	fubp1	91	78.261	MGP_CAROLIEiJ_G0025740	Fubp1	99	74.393	Mus_caroli
ENSGAFG00000020972	fubp1	91	78.032	ENSMUSG00000028034	Fubp1	99	74.206	Mus_musculus
ENSGAFG00000020972	fubp1	91	78.082	MGP_PahariEiJ_G0027191	Fubp1	99	74.254	Mus_pahari
ENSGAFG00000020972	fubp1	91	78.261	MGP_SPRETEiJ_G0026693	Fubp1	99	74.393	Mus_spretus
ENSGAFG00000020972	fubp1	91	73.763	ENSMLUG00000014802	FUBP1	100	69.107	Myotis_lucifugus
ENSGAFG00000020972	fubp1	91	75.000	ENSNGAG00000014302	Fubp1	98	70.270	Nannospalax_galili
ENSGAFG00000020972	fubp1	100	88.594	ENSNBRG00000015099	fubp1	100	88.750	Neolamprologus_brichardi
ENSGAFG00000020972	fubp1	91	75.169	ENSNLEG00000009772	FUBP1	100	68.769	Nomascus_leucogenys
ENSGAFG00000020972	fubp1	80	83.824	ENSMEUG00000007917	-	63	83.824	Notamacropus_eugenii
ENSGAFG00000020972	fubp1	91	86.957	ENSOPRG00000001175	FUBP1	98	60.000	Ochotona_princeps
ENSGAFG00000020972	fubp1	99	52.632	ENSODEG00000003657	-	99	50.466	Octodon_degus
ENSGAFG00000020972	fubp1	91	77.098	ENSODEG00000002600	-	100	70.270	Octodon_degus
ENSGAFG00000020972	fubp1	99	93.665	ENSONIG00000018381	fubp1	99	92.224	Oreochromis_niloticus
ENSGAFG00000020972	fubp1	81	80.323	ENSOANG00000009777	FUBP1	100	70.400	Ornithorhynchus_anatinus
ENSGAFG00000020972	fubp1	99	86.991	ENSORLG00000003540	fubp1	99	87.461	Oryzias_latipes
ENSGAFG00000020972	fubp1	100	92.078	ENSORLG00020005908	fubp1	96	92.078	Oryzias_latipes_hni
ENSGAFG00000020972	fubp1	100	92.239	ENSORLG00015008779	fubp1	100	91.318	Oryzias_latipes_hsok
ENSGAFG00000020972	fubp1	100	91.916	ENSOMEG00000021943	fubp1	97	92.216	Oryzias_melastigma
ENSGAFG00000020972	fubp1	91	73.605	ENSOGAG00000014233	FUBP1	100	69.006	Otolemur_garnettii
ENSGAFG00000020972	fubp1	91	77.955	ENSOARG00000013259	FUBP1	100	71.784	Ovis_aries
ENSGAFG00000020972	fubp1	91	77.778	ENSPPRG00000000413	FUBP1	100	70.060	Panthera_pardus
ENSGAFG00000020972	fubp1	91	77.778	ENSPTIG00000019450	FUBP1	100	70.060	Panthera_tigris_altaica
ENSGAFG00000020972	fubp1	87	78.624	ENSPSIG00000012965	FUBP1	100	70.317	Pelodiscus_sinensis
ENSGAFG00000020972	fubp1	99	82.126	ENSPMGG00000009060	fubp1	99	82.085	Periophthalmus_magnuspinnatus
ENSGAFG00000020972	fubp1	91	78.899	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSGAFG00000020972	fubp1	58	58.515	ENSPMAG00000001644	-	93	58.515	Petromyzon_marinus
ENSGAFG00000020972	fubp1	100	97.594	ENSPFOG00000000238	fubp1	100	97.594	Poecilia_formosa
ENSGAFG00000020972	fubp1	100	95.639	ENSPLAG00000021170	fubp1	100	95.639	Poecilia_latipinna
ENSGAFG00000020972	fubp1	99	91.121	ENSPMEG00000004747	fubp1	99	97.865	Poecilia_mexicana
ENSGAFG00000020972	fubp1	100	97.444	ENSPREG00000017911	fubp1	100	97.444	Poecilia_reticulata
ENSGAFG00000020972	fubp1	72	76.000	ENSPPYG00000001219	-	68	77.056	Pongo_abelii
ENSGAFG00000020972	fubp1	91	77.727	ENSPCAG00000012617	FUBP1	98	69.820	Procavia_capensis
ENSGAFG00000020972	fubp1	91	78.753	ENSPCOG00000024974	FUBP1	100	70.060	Propithecus_coquereli
ENSGAFG00000020972	fubp1	91	71.655	ENSPVAG00000014637	FUBP1	98	66.117	Pteropus_vampyrus
ENSGAFG00000020972	fubp1	100	93.534	ENSPNYG00000004552	fubp1	100	92.932	Pundamilia_nyererei
ENSGAFG00000020972	fubp1	100	84.398	ENSPNAG00000016207	fubp1	100	84.398	Pygocentrus_nattereri
ENSGAFG00000020972	fubp1	91	77.982	ENSRNOG00000043370	Fubp1	100	70.393	Rattus_norvegicus
ENSGAFG00000020972	fubp1	91	77.551	ENSRBIG00000042950	FUBP1	100	69.910	Rhinopithecus_bieti
ENSGAFG00000020972	fubp1	91	77.551	ENSRROG00000043534	FUBP1	100	69.910	Rhinopithecus_roxellana
ENSGAFG00000020972	fubp1	91	77.778	ENSSBOG00000027299	FUBP1	98	73.469	Saimiri_boliviensis_boliviensis
ENSGAFG00000020972	fubp1	86	78.025	ENSSHAG00000005367	FUBP1	99	73.370	Sarcophilus_harrisii
ENSGAFG00000020972	fubp1	99	81.750	ENSSFOG00015010213	fubp1	99	81.599	Scleropages_formosus
ENSGAFG00000020972	fubp1	100	88.141	ENSSMAG00000012029	fubp1	98	87.848	Scophthalmus_maximus
ENSGAFG00000020972	fubp1	100	96.391	ENSSDUG00000007383	fubp1	98	96.391	Seriola_dumerili
ENSGAFG00000020972	fubp1	100	96.406	ENSSLDG00000022863	fubp1	98	96.406	Seriola_lalandi_dorsalis
ENSGAFG00000020972	fubp1	82	87.838	ENSSARG00000011730	FUBP1	70	89.189	Sorex_araneus
ENSGAFG00000020972	fubp1	100	66.714	ENSSPUG00000008389	FUBP1	100	68.353	Sphenodon_punctatus
ENSGAFG00000020972	fubp1	100	94.887	ENSSPAG00000010161	fubp1	100	94.887	Stegastes_partitus
ENSGAFG00000020972	fubp1	86	78.818	ENSTGUG00000006841	FUBP1	100	70.494	Taeniopygia_guttata
ENSGAFG00000020972	fubp1	100	85.776	ENSTRUG00000004615	fubp1	100	86.212	Takifugu_rubripes
ENSGAFG00000020972	fubp1	51	94.521	ENSTNIG00000019815	-	87	94.558	Tetraodon_nigroviridis
ENSGAFG00000020972	fubp1	78	82.738	ENSTBEG00000017333	FUBP1	62	88.690	Tupaia_belangeri
ENSGAFG00000020972	fubp1	91	77.778	ENSTTRG00000000096	FUBP1	98	69.865	Tursiops_truncatus
ENSGAFG00000020972	fubp1	91	77.778	ENSVPAG00000004709	FUBP1	99	69.865	Vicugna_pacos
ENSGAFG00000020972	fubp1	100	86.460	ENSXCOG00000019354	fubp1	100	85.968	Xiphophorus_couchianus
ENSGAFG00000020972	fubp1	92	98.194	ENSXMAG00000007168	fubp1	99	98.194	Xiphophorus_maculatus