EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000020992 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6838 bases
Position: chrNHOQ01000466.1:3458986-3465823
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000031133	RRM_1	PF00076.22	3.3e-13	1	1
ENSGAFP00000031131	RRM_1	PF00076.22	4.1e-13	1	1
ENSGAFP00000031132	RRM_1	PF00076.22	4.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000031452	-	831	-	ENSGAFP00000031133	276 (aa)	-	-
ENSGAFT00000031451	-	933	-	ENSGAFP00000031132	310 (aa)	-	-
ENSGAFT00000031450	-	915	-	ENSGAFP00000031131	304 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000020992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000020992's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000020992	-	89	74.820	ENSGAFG00000020486	-	99	68.345

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000020992	-	99	48.727	ENSG00000184672	RALYL	93	77.215	Homo_sapiens
ENSGAFG00000020992	-	82	86.166	ENSAPOG00000006963	hnrnpc	95	75.593	Acanthochromis_polyacanthus
ENSGAFG00000020992	-	84	82.479	ENSACIG00000000270	-	99	74.497	Amphilophus_citrinellus
ENSGAFG00000020992	-	100	88.141	ENSACIG00000016568	-	100	87.179	Amphilophus_citrinellus
ENSGAFG00000020992	-	82	86.561	ENSAOCG00000003896	-	95	75.932	Amphiprion_ocellaris
ENSGAFG00000020992	-	99	87.662	ENSAOCG00000021616	-	97	88.462	Amphiprion_ocellaris
ENSGAFG00000020992	-	100	79.932	ENSAPEG00000019962	-	100	81.973	Amphiprion_percula
ENSGAFG00000020992	-	82	86.561	ENSAPEG00000001489	-	95	75.932	Amphiprion_percula
ENSGAFG00000020992	-	78	86.636	ENSATEG00000011734	-	99	75.000	Anabas_testudineus
ENSGAFG00000020992	-	85	89.394	ENSATEG00000018006	-	100	82.918	Anabas_testudineus
ENSGAFG00000020992	-	87	46.853	ENSAPLG00000015574	RALYL	76	54.955	Anas_platyrhynchos
ENSGAFG00000020992	-	76	53.778	ENSACAG00000028464	RALYL	75	55.405	Anolis_carolinensis
ENSGAFG00000020992	-	99	48.188	ENSANAG00000023383	RALYL	74	57.619	Aotus_nancymaae
ENSGAFG00000020992	-	82	79.842	ENSACLG00000013636	-	85	79.377	Astatotilapia_calliptera
ENSGAFG00000020992	-	78	84.545	ENSACLG00000000995	-	82	84.545	Astatotilapia_calliptera
ENSGAFG00000020992	-	84	89.883	ENSACLG00000005707	-	88	90.661	Astatotilapia_calliptera
ENSGAFG00000020992	-	91	62.898	ENSAMXG00000042946	hnrnpc	99	73.057	Astyanax_mexicanus
ENSGAFG00000020992	-	78	84.722	ENSAMXG00000034915	zgc:55733	89	74.615	Astyanax_mexicanus
ENSGAFG00000020992	-	99	48.188	ENSCJAG00000000402	RALYL	74	57.619	Callithrix_jacchus
ENSGAFG00000020992	-	91	47.959	ENSCPOG00000012314	RALYL	75	55.204	Cavia_porcellus
ENSGAFG00000020992	-	99	48.364	ENSCCAG00000025003	RALYL	77	77.215	Cebus_capucinus
ENSGAFG00000020992	-	99	48.727	ENSCATG00000042145	RALYL	83	52.720	Cercocebus_atys
ENSGAFG00000020992	-	91	47.959	ENSCLAG00000005228	RALYL	75	55.204	Chinchilla_lanigera
ENSGAFG00000020992	-	76	52.889	ENSCHOG00000013228	RALYL	75	52.252	Choloepus_hoffmanni
ENSGAFG00000020992	-	99	48.727	ENSCANG00000039144	RALYL	83	52.720	Colobus_angolensis_palliatus
ENSGAFG00000020992	-	99	46.181	ENSCGRG00001009241	Ralyl	75	54.505	Cricetulus_griseus_chok1gshd
ENSGAFG00000020992	-	79	90.950	ENSCSEG00000021349	-	89	78.571	Cynoglossus_semilaevis
ENSGAFG00000020992	-	99	64.286	ENSCSEG00000019769	-	80	70.954	Cynoglossus_semilaevis
ENSGAFG00000020992	-	99	58.845	ENSCVAG00000002797	-	99	54.915	Cyprinodon_variegatus
ENSGAFG00000020992	-	99	93.871	ENSCVAG00000016981	-	97	94.904	Cyprinodon_variegatus
ENSGAFG00000020992	-	78	87.500	ENSDARG00000103845	zgc:55733	99	70.408	Danio_rerio
ENSGAFG00000020992	-	78	83.410	ENSDARG00000053810	hnrnpc	97	71.246	Danio_rerio
ENSGAFG00000020992	-	98	47.038	ENSDORG00000003721	Ralyl	75	55.605	Dipodomys_ordii
ENSGAFG00000020992	-	58	55.491	ENSETEG00000014028	RALYL	82	60.625	Echinops_telfairi
ENSGAFG00000020992	-	99	41.696	ENSEBUG00000012363	hnrnpc	69	45.306	Eptatretus_burgeri
ENSGAFG00000020992	-	75	49.533	ENSEBUG00000006049	RALYL	74	49.048	Eptatretus_burgeri
ENSGAFG00000020992	-	76	53.778	ENSEEUG00000007202	RALYL	76	55.204	Erinaceus_europaeus
ENSGAFG00000020992	-	99	70.979	ENSELUG00000007714	-	99	69.965	Esox_lucius
ENSGAFG00000020992	-	92	74.219	ENSELUG00000004132	-	99	73.885	Esox_lucius
ENSGAFG00000020992	-	76	57.944	ENSFALG00000008647	RALYL	97	57.746	Ficedula_albicollis
ENSGAFG00000020992	-	98	68.978	ENSFHEG00000003605	-	84	75.581	Fundulus_heteroclitus
ENSGAFG00000020992	-	100	85.846	ENSFHEG00000007278	-	100	85.846	Fundulus_heteroclitus
ENSGAFG00000020992	-	75	58.019	ENSGALG00000036938	RALYL	75	54.709	Gallus_gallus
ENSGAFG00000020992	-	100	77.950	ENSGACG00000017772	-	97	88.889	Gasterosteus_aculeatus
ENSGAFG00000020992	-	80	72.687	ENSGACG00000018932	-	89	67.401	Gasterosteus_aculeatus
ENSGAFG00000020992	-	99	48.727	ENSGGOG00000000841	RALYL	83	52.720	Gorilla_gorilla
ENSGAFG00000020992	-	100	86.943	ENSHBUG00000010527	-	97	84.713	Haplochromis_burtoni
ENSGAFG00000020992	-	82	80.632	ENSHBUG00000018342	-	83	80.156	Haplochromis_burtoni
ENSGAFG00000020992	-	91	47.619	ENSHGLG00000004866	RALYL	75	54.751	Heterocephalus_glaber_female
ENSGAFG00000020992	-	91	47.619	ENSHGLG00100017480	RALYL	75	54.751	Heterocephalus_glaber_male
ENSGAFG00000020992	-	84	81.852	ENSHCOG00000012333	hnrnpc	90	81.818	Hippocampus_comes
ENSGAFG00000020992	-	78	84.722	ENSIPUG00000008666	zgc:55733	100	74.249	Ictalurus_punctatus
ENSGAFG00000020992	-	83	79.216	ENSIPUG00000011271	hnrnpc	100	77.056	Ictalurus_punctatus
ENSGAFG00000020992	-	99	46.367	ENSSTOG00000012583	RALYL	76	55.157	Ictidomys_tridecemlineatus
ENSGAFG00000020992	-	96	71.956	ENSKMAG00000011170	-	83	78.988	Kryptolebias_marmoratus
ENSGAFG00000020992	-	99	88.673	ENSKMAG00000018265	-	97	90.415	Kryptolebias_marmoratus
ENSGAFG00000020992	-	99	71.296	ENSLBEG00000024418	-	99	68.750	Labrus_bergylta
ENSGAFG00000020992	-	98	73.633	ENSLBEG00000006979	-	99	71.429	Labrus_bergylta
ENSGAFG00000020992	-	100	82.315	ENSLBEG00000006193	-	97	84.244	Labrus_bergylta
ENSGAFG00000020992	-	85	69.288	ENSLOCG00000002560	hnrnpc	91	68.284	Lepisosteus_oculatus
ENSGAFG00000020992	-	99	48.727	ENSMNEG00000033288	RALYL	83	52.720	Macaca_nemestrina
ENSGAFG00000020992	-	99	48.727	ENSMLEG00000038284	RALYL	83	52.720	Mandrillus_leucophaeus
ENSGAFG00000020992	-	100	84.345	ENSMAMG00000008033	-	97	85.623	Mastacembelus_armatus
ENSGAFG00000020992	-	90	76.400	ENSMAMG00000012236	-	99	74.237	Mastacembelus_armatus
ENSGAFG00000020992	-	100	86.943	ENSMZEG00005024249	-	97	84.713	Maylandia_zebra
ENSGAFG00000020992	-	82	80.237	ENSMZEG00005020460	-	88	78.077	Maylandia_zebra
ENSGAFG00000020992	-	99	46.181	ENSMAUG00000015149	Ralyl	75	54.505	Mesocricetus_auratus
ENSGAFG00000020992	-	91	48.944	ENSMICG00000005558	RALYL	80	77.215	Microcebus_murinus
ENSGAFG00000020992	-	99	46.552	ENSMOCG00000017371	Ralyl	75	54.505	Microtus_ochrogaster
ENSGAFG00000020992	-	78	87.500	ENSMMOG00000021465	-	89	80.859	Mola_mola
ENSGAFG00000020992	-	93	87.372	ENSMMOG00000019520	-	100	84.932	Mola_mola
ENSGAFG00000020992	-	85	84.030	ENSMALG00000014623	-	81	87.451	Monopterus_albus
ENSGAFG00000020992	-	76	81.132	ENSMALG00000007520	-	98	66.667	Monopterus_albus
ENSGAFG00000020992	-	99	46.181	ENSMUSG00000039717	Ralyl	93	75.949	Mus_musculus
ENSGAFG00000020992	-	75	56.054	ENSMPUG00000010724	RALYL	75	54.709	Mustela_putorius_furo
ENSGAFG00000020992	-	99	46.367	ENSNGAG00000013375	Ralyl	75	54.505	Nannospalax_galili
ENSGAFG00000020992	-	82	80.934	ENSNBRG00000004912	-	94	79.386	Neolamprologus_brichardi
ENSGAFG00000020992	-	100	85.669	ENSNBRG00000015676	-	97	86.306	Neolamprologus_brichardi
ENSGAFG00000020992	-	99	48.727	ENSNLEG00000002702	RALYL	80	52.720	Nomascus_leucogenys
ENSGAFG00000020992	-	64	48.958	ENSOPRG00000013650	-	98	47.895	Ochotona_princeps
ENSGAFG00000020992	-	99	45.833	ENSODEG00000001012	RALYL	75	54.751	Octodon_degus
ENSGAFG00000020992	-	82	81.423	ENSONIG00000007859	-	91	81.132	Oreochromis_niloticus
ENSGAFG00000020992	-	100	87.261	ENSONIG00000018350	-	97	85.032	Oreochromis_niloticus
ENSGAFG00000020992	-	99	87.227	ENSORLG00000003144	-	97	86.462	Oryzias_latipes
ENSGAFG00000020992	-	82	72.549	ENSORLG00000009999	-	83	70.656	Oryzias_latipes
ENSGAFG00000020992	-	82	72.157	ENSORLG00020018228	hnrnpc	83	70.270	Oryzias_latipes_hni
ENSGAFG00000020992	-	82	72.549	ENSORLG00015019755	-	83	70.656	Oryzias_latipes_hsok
ENSGAFG00000020992	-	99	86.378	ENSORLG00015009460	-	97	86.239	Oryzias_latipes_hsok
ENSGAFG00000020992	-	82	74.118	ENSOMEG00000020488	-	83	71.815	Oryzias_melastigma
ENSGAFG00000020992	-	99	90.323	ENSOMEG00000022665	-	97	89.172	Oryzias_melastigma
ENSGAFG00000020992	-	99	48.727	ENSPPAG00000038705	RALYL	83	52.720	Pan_paniscus
ENSGAFG00000020992	-	75	59.624	ENSPPRG00000018612	RALYL	74	57.746	Panthera_pardus
ENSGAFG00000020992	-	75	59.624	ENSPTIG00000020331	RALYL	74	57.746	Panthera_tigris_altaica
ENSGAFG00000020992	-	99	48.727	ENSPTRG00000020381	RALYL	83	52.720	Pan_troglodytes
ENSGAFG00000020992	-	99	48.727	ENSPANG00000029305	RALYL	83	52.720	Papio_anubis
ENSGAFG00000020992	-	85	77.323	ENSPKIG00000008592	-	97	74.688	Paramormyrops_kingsleyae
ENSGAFG00000020992	-	100	71.787	ENSPKIG00000022837	-	97	76.176	Paramormyrops_kingsleyae
ENSGAFG00000020992	-	75	54.260	ENSPSIG00000011135	RALYL	75	55.157	Pelodiscus_sinensis
ENSGAFG00000020992	-	99	80.364	ENSPMGG00000013144	-	99	77.091	Periophthalmus_magnuspinnatus
ENSGAFG00000020992	-	98	62.171	ENSPMGG00000017774	-	96	67.384	Periophthalmus_magnuspinnatus
ENSGAFG00000020992	-	99	46.181	ENSPEMG00000016447	Ralyl	75	54.505	Peromyscus_maniculatus_bairdii
ENSGAFG00000020992	-	76	53.982	ENSPMAG00000002407	RALYL	98	53.540	Petromyzon_marinus
ENSGAFG00000020992	-	89	75.812	ENSPFOG00000001583	-	95	72.635	Poecilia_formosa
ENSGAFG00000020992	-	100	99.032	ENSPFOG00000002643	-	97	99.032	Poecilia_formosa
ENSGAFG00000020992	-	100	98.714	ENSPLAG00000000061	-	97	98.714	Poecilia_latipinna
ENSGAFG00000020992	-	89	74.275	ENSPLAG00000015305	-	95	71.186	Poecilia_latipinna
ENSGAFG00000020992	-	89	77.338	ENSPMEG00000004802	-	95	72.635	Poecilia_mexicana
ENSGAFG00000020992	-	100	98.387	ENSPMEG00000016524	-	97	98.387	Poecilia_mexicana
ENSGAFG00000020992	-	82	77.165	ENSPREG00000007928	-	83	76.744	Poecilia_reticulata
ENSGAFG00000020992	-	82	98.795	ENSPREG00000001852	-	85	98.814	Poecilia_reticulata
ENSGAFG00000020992	-	91	46.128	ENSPVAG00000010821	RALYL	78	52.790	Pteropus_vampyrus
ENSGAFG00000020992	-	82	81.323	ENSPNYG00000020293	-	87	79.767	Pundamilia_nyererei
ENSGAFG00000020992	-	99	85.000	ENSPNYG00000003747	-	97	82.500	Pundamilia_nyererei
ENSGAFG00000020992	-	78	82.949	ENSPNAG00000015686	hnrnpc	86	78.431	Pygocentrus_nattereri
ENSGAFG00000020992	-	83	74.786	ENSPNAG00000019200	zgc:55733	96	68.562	Pygocentrus_nattereri
ENSGAFG00000020992	-	99	48.727	ENSRROG00000023925	RALYL	80	77.215	Rhinopithecus_roxellana
ENSGAFG00000020992	-	99	73.913	ENSSFOG00015012015	-	99	74.275	Scleropages_formosus
ENSGAFG00000020992	-	90	75.517	ENSSFOG00015012924	-	83	96.341	Scleropages_formosus
ENSGAFG00000020992	-	81	80.723	ENSSMAG00000013592	-	96	73.397	Scophthalmus_maximus
ENSGAFG00000020992	-	99	83.696	ENSSMAG00000011147	-	99	81.884	Scophthalmus_maximus
ENSGAFG00000020992	-	90	78.445	ENSSDUG00000001723	-	95	75.593	Seriola_dumerili
ENSGAFG00000020992	-	100	85.256	ENSSDUG00000006730	-	97	82.051	Seriola_dumerili
ENSGAFG00000020992	-	85	85.171	ENSSLDG00000007474	-	91	85.171	Seriola_lalandi_dorsalis
ENSGAFG00000020992	-	89	79.710	ENSSLDG00000007454	-	83	82.101	Seriola_lalandi_dorsalis
ENSGAFG00000020992	-	95	74.532	ENSSPAG00000023204	-	95	76.271	Stegastes_partitus
ENSGAFG00000020992	-	100	88.424	ENSSPAG00000013996	-	97	89.068	Stegastes_partitus
ENSGAFG00000020992	-	87	46.853	ENSTGUG00000011689	RALYL	80	53.448	Taeniopygia_guttata
ENSGAFG00000020992	-	78	87.097	ENSTRUG00000020158	-	99	69.231	Takifugu_rubripes
ENSGAFG00000020992	-	82	78.764	ENSTNIG00000007427	-	84	79.151	Tetraodon_nigroviridis
ENSGAFG00000020992	-	82	78.800	ENSTNIG00000000334	-	94	77.692	Tetraodon_nigroviridis
ENSGAFG00000020992	-	76	48.899	ENSTBEG00000005551	RALYL	87	49.774	Tupaia_belangeri
ENSGAFG00000020992	-	75	51.770	ENSTTRG00000015762	RALYL	74	53.704	Tursiops_truncatus
ENSGAFG00000020992	-	75	54.028	ENSVPAG00000008501	RALYL	74	53.810	Vicugna_pacos
ENSGAFG00000020992	-	72	93.827	ENSXCOG00000019434	-	100	69.580	Xiphophorus_couchianus
ENSGAFG00000020992	-	92	69.416	ENSXCOG00000006552	-	90	68.817	Xiphophorus_couchianus
ENSGAFG00000020992	-	90	98.208	ENSXMAG00000022849	-	91	98.208	Xiphophorus_maculatus
ENSGAFG00000020992	-	95	71.375	ENSXMAG00000009333	-	95	70.946	Xiphophorus_maculatus