EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAFG00000021040 (Gene tree)
Gene ID
-
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly-U binding splicing factor b
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Plus strand
Length
15994 bases
Position
chrNHOQ01002355.1:4734863-4750856
Accession
ZDB-GENE-040625-116
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000031210RRM_1PF00076.221.5e-4412
ENSGAFP00000031210RRM_1PF00076.221.5e-4422
ENSGAFP00000031209RRM_1PF00076.229.8e-4412
ENSGAFP00000031209RRM_1PF00076.229.8e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000031530-2276-ENSGAFP00000031210552 (aa)--
ENSGAFT00000031529-2369-ENSGAFP00000031209513 (aa)--
Gene Model
Click here to download ENSGAFG00000021040's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000021040's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAFG00000021040puf60b10080.583ENSGAFG00000004334-9980.903
ENSGAFG00000021040puf60b5437.500ENSGAFG00000005628-6937.500
ENSGAFG00000021040puf60b5636.275ENSGAFG00000013626u2af2a5838.235
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000021040puf60b10085.413ENSG00000179950PUF6010084.261Homo_sapiens
ENSGAFG00000021040puf60b10097.466ENSAPOG00000001713puf60b10097.148Acanthochromis_polyacanthus
ENSGAFG00000021040puf60b10083.493ENSAMEG00000006406PUF609381.404Ailuropoda_melanoleuca
ENSGAFG00000021040puf60b10077.821ENSACIG00000003263-9977.670Amphilophus_citrinellus
ENSGAFG00000021040puf60b10097.856ENSACIG00000021705puf60b10097.856Amphilophus_citrinellus
ENSGAFG00000021040puf60b10083.852ENSAOCG00000015558-10083.491Amphiprion_ocellaris
ENSGAFG00000021040puf60b10097.466ENSAOCG00000005395puf60b10097.466Amphiprion_ocellaris
ENSGAFG00000021040puf60b10074.612ENSAPEG00000001836-9975.723Amphiprion_percula
ENSGAFG00000021040puf60b10091.813ENSAPEG00000011923puf60b10090.684Amphiprion_percula
ENSGAFG00000021040puf60b10098.246ENSATEG00000001730puf60b10097.529Anabas_testudineus
ENSGAFG00000021040puf60b10082.296ENSATEG00000006303-10081.973Anabas_testudineus
ENSGAFG00000021040puf60b10085.797ENSAPLG00000010150PUF6010084.250Anas_platyrhynchos
ENSGAFG00000021040puf60b10084.733ENSACAG00000001645PUF609783.523Anolis_carolinensis
ENSGAFG00000021040puf60b10085.221ENSANAG00000018626PUF6010084.069Aotus_nancymaae
ENSGAFG00000021040puf60b10097.856ENSACLG00000004462puf60b10097.856Astatotilapia_calliptera
ENSGAFG00000021040puf60b10086.476ENSAMXG00000036570puf60a10083.272Astyanax_mexicanus
ENSGAFG00000021040puf60b10080.835ENSAMXG00000041030puf60b10081.214Astyanax_mexicanus
ENSGAFG00000021040puf60b10085.797ENSBTAG00000037493PUF6010082.991Bos_taurus
ENSGAFG00000021040puf60b8150.667WBGene00004389rnp-68850.779Caenorhabditis_elegans
ENSGAFG00000021040puf60b10085.413ENSCJAG00000021485PUF6010082.617Callithrix_jacchus
ENSGAFG00000021040puf60b10085.221ENSCAFG00000001400PUF609383.302Canis_familiaris
ENSGAFG00000021040puf60b10085.605ENSCAFG00020018754PUF6010082.804Canis_lupus_dingo
ENSGAFG00000021040puf60b10085.797ENSCHIG00000001618PUF608783.871Capra_hircus
ENSGAFG00000021040puf60b10085.605ENSTSYG00000011912PUF6010084.453Carlito_syrichta
ENSGAFG00000021040puf60b10080.762ENSCPOG00000014613PUF609478.908Cavia_porcellus
ENSGAFG00000021040puf60b10085.413ENSCCAG00000007744PUF6010082.804Cebus_capucinus
ENSGAFG00000021040puf60b10085.413ENSCATG00000035405PUF6010082.617Cercocebus_atys
ENSGAFG00000021040puf60b10085.605ENSCLAG00000009154PUF609383.491Chinchilla_lanigera
ENSGAFG00000021040puf60b10085.413ENSCSAG00000008878PUF6010084.261Chlorocebus_sabaeus
ENSGAFG00000021040puf60b10085.605ENSCPBG00000005595PUF609983.804Chrysemys_picta_bellii
ENSGAFG00000021040puf60b6358.876ENSCING00000002156-8759.403Ciona_intestinalis
ENSGAFG00000021040puf60b9848.444ENSCING00000008436-9946.904Ciona_intestinalis
ENSGAFG00000021040puf60b9748.400ENSCSAVG00000004765-9747.600Ciona_savignyi
ENSGAFG00000021040puf60b9754.286ENSCSAVG00000001385-9954.143Ciona_savignyi
ENSGAFG00000021040puf60b8184.834ENSCANG00000041843PUF6010083.175Colobus_angolensis_palliatus
ENSGAFG00000021040puf60b10085.797ENSCGRG00001017442Puf609383.681Cricetulus_griseus_chok1gshd
ENSGAFG00000021040puf60b10085.797ENSCGRG00000003717Puf609383.871Cricetulus_griseus_crigri
ENSGAFG00000021040puf60b10098.051ENSCSEG00000019887puf60b9496.970Cynoglossus_semilaevis
ENSGAFG00000021040puf60b10076.686ENSCSEG00000014845-9176.415Cynoglossus_semilaevis
ENSGAFG00000021040puf60b10098.830ENSCVAG00000009386puf60b10098.830Cyprinodon_variegatus
ENSGAFG00000021040puf60b9181.838ENSCVAG00000001560-9881.197Cyprinodon_variegatus
ENSGAFG00000021040puf60b10087.283ENSDARG00000032175puf60a9991.925Danio_rerio
ENSGAFG00000021040puf60b10081.594ENSDARG00000001241puf60b9998.413Danio_rerio
ENSGAFG00000021040puf60b9971.012ENSDNOG00000043278PUF609070.428Dasypus_novemcinctus
ENSGAFG00000021040puf60b10085.797ENSDORG00000004585Puf609583.871Dipodomys_ordii
ENSGAFG00000021040puf60b8563.103FBgn0028577hfp7263.971Drosophila_melanogaster
ENSGAFG00000021040puf60b10059.459ENSEBUG00000014291puf60b8460.951Eptatretus_burgeri
ENSGAFG00000021040puf60b9770.120ENSEBUG00000005470-9467.041Eptatretus_burgeri
ENSGAFG00000021040puf60b10085.605ENSEASG00005009695PUF6010082.804Equus_asinus_asinus
ENSGAFG00000021040puf60b10085.605ENSECAG00000024681PUF609883.365Equus_caballus
ENSGAFG00000021040puf60b10087.977ENSELUG00000006507puf60b10085.278Esox_lucius
ENSGAFG00000021040puf60b10088.588ENSELUG00000018443-10087.925Esox_lucius
ENSGAFG00000021040puf60b10085.605ENSFCAG00000001045PUF6010084.453Felis_catus
ENSGAFG00000021040puf60b10076.583ENSFALG00000001136PUF609875.712Ficedula_albicollis
ENSGAFG00000021040puf60b10085.413ENSFDAG00000017177PUF609383.491Fukomys_damarensis
ENSGAFG00000021040puf60b9682.688ENSFHEG00000021687PUF6010083.610Fundulus_heteroclitus
ENSGAFG00000021040puf60b10099.610ENSFHEG00000020046puf60b10099.620Fundulus_heteroclitus
ENSGAFG00000021040puf60b10083.012ENSGMOG00000006392puf60b10082.252Gadus_morhua
ENSGAFG00000021040puf60b6689.504ENSGALG00000039901PUF609390.533Gallus_gallus
ENSGAFG00000021040puf60b10084.211ENSGACG00000004717puf60b9884.393Gasterosteus_aculeatus
ENSGAFG00000021040puf60b10073.346ENSGACG00000001484-10072.374Gasterosteus_aculeatus
ENSGAFG00000021040puf60b10085.605ENSGAGG00000013289PUF609383.396Gopherus_agassizii
ENSGAFG00000021040puf60b10085.413ENSGGOG00000004646PUF6010082.617Gorilla_gorilla
ENSGAFG00000021040puf60b10097.856ENSHBUG00000015118puf60b10097.856Haplochromis_burtoni
ENSGAFG00000021040puf60b10083.463ENSHBUG00000009634-10082.353Haplochromis_burtoni
ENSGAFG00000021040puf60b10085.413ENSHGLG00000006111PUF609383.491Heterocephalus_glaber_female
ENSGAFG00000021040puf60b10085.413ENSHGLG00100012362PUF609383.491Heterocephalus_glaber_male
ENSGAFG00000021040puf60b10092.481ENSHCOG00000015541puf60b10093.071Hippocampus_comes
ENSGAFG00000021040puf60b9867.451ENSHCOG00000000378-9966.163Hippocampus_comes
ENSGAFG00000021040puf60b10085.029ENSIPUG00000002453puf60a9984.645Ictalurus_punctatus
ENSGAFG00000021040puf60b10082.197ENSIPUG00000004660puf60b9981.818Ictalurus_punctatus
ENSGAFG00000021040puf60b10085.605ENSSTOG00000025037PUF609483.491Ictidomys_tridecemlineatus
ENSGAFG00000021040puf60b10085.797ENSJJAG00000001076Puf609383.681Jaculus_jaculus
ENSGAFG00000021040puf60b10077.927ENSKMAG00000010106-10078.352Kryptolebias_marmoratus
ENSGAFG00000021040puf60b10099.220ENSKMAG00000016745puf60b10099.220Kryptolebias_marmoratus
ENSGAFG00000021040puf60b10093.762ENSLBEG00000012505puf60b10093.834Labrus_bergylta
ENSGAFG00000021040puf60b7080.381ENSLACG00000005456PUF609978.108Latimeria_chalumnae
ENSGAFG00000021040puf60b10088.932ENSLOCG00000010106puf60b10088.636Lepisosteus_oculatus
ENSGAFG00000021040puf60b10084.453ENSLAFG00000022929PUF609482.732Loxodonta_africana
ENSGAFG00000021040puf60b10085.413ENSMFAG00000043373PUF6010082.617Macaca_fascicularis
ENSGAFG00000021040puf60b10085.413ENSMMUG00000013558PUF6010082.617Macaca_mulatta
ENSGAFG00000021040puf60b10085.413ENSMNEG00000031099PUF6010082.617Macaca_nemestrina
ENSGAFG00000021040puf60b10085.413ENSMLEG00000040009PUF6010084.261Mandrillus_leucophaeus
ENSGAFG00000021040puf60b10096.101ENSMAMG00000010394puf60b10093.548Mastacembelus_armatus
ENSGAFG00000021040puf60b10083.495ENSMAMG00000019476-10082.955Mastacembelus_armatus
ENSGAFG00000021040puf60b10083.463ENSMZEG00005019425-10082.353Maylandia_zebra
ENSGAFG00000021040puf60b10097.856ENSMZEG00005018515puf60b10097.856Maylandia_zebra
ENSGAFG00000021040puf60b10085.797ENSMGAG00000013070PUF609390.855Meleagris_gallopavo
ENSGAFG00000021040puf60b6990.278ENSMAUG00000014267-9087.432Mesocricetus_auratus
ENSGAFG00000021040puf60b9668.254ENSMAUG00000018549-9567.400Mesocricetus_auratus
ENSGAFG00000021040puf60b10085.605ENSMICG00000012226PUF6010082.804Microcebus_murinus
ENSGAFG00000021040puf60b10085.797ENSMOCG00000018780Puf609383.871Microtus_ochrogaster
ENSGAFG00000021040puf60b10098.051ENSMMOG00000004217puf60b10098.051Mola_mola
ENSGAFG00000021040puf60b10073.592ENSMMOG00000018059-9976.376Mola_mola
ENSGAFG00000021040puf60b10085.221ENSMODG00000009161PUF609483.112Monodelphis_domestica
ENSGAFG00000021040puf60b10089.864ENSMALG00000006797puf60b10089.354Monopterus_albus
ENSGAFG00000021040puf60b10082.296ENSMALG00000000200-10081.214Monopterus_albus
ENSGAFG00000021040puf60b10085.988MGP_CAROLIEiJ_G0019910Puf609384.061Mus_caroli
ENSGAFG00000021040puf60b10085.988ENSMUSG00000002524Puf609384.061Mus_musculus
ENSGAFG00000021040puf60b10085.988MGP_PahariEiJ_G0019920Puf609384.061Mus_pahari
ENSGAFG00000021040puf60b10085.988MGP_SPRETEiJ_G0020812Puf609384.061Mus_spretus
ENSGAFG00000021040puf60b10085.413ENSMPUG00000008137PUF609283.491Mustela_putorius_furo
ENSGAFG00000021040puf60b10085.029ENSMLUG00000000238-9382.922Myotis_lucifugus
ENSGAFG00000021040puf60b10079.079ENSMLUG00000013032-9877.040Myotis_lucifugus
ENSGAFG00000021040puf60b10085.797ENSNGAG00000000712Puf6010084.645Nannospalax_galili
ENSGAFG00000021040puf60b10083.463ENSNBRG00000017223-10082.353Neolamprologus_brichardi
ENSGAFG00000021040puf60b8197.122ENSNBRG00000013047puf60b9797.122Neolamprologus_brichardi
ENSGAFG00000021040puf60b10085.413ENSNLEG00000002156PUF609883.302Nomascus_leucogenys
ENSGAFG00000021040puf60b7293.863ENSOPRG00000002147PUF607293.863Ochotona_princeps
ENSGAFG00000021040puf60b9863.492ENSODEG00000015513-9762.089Octodon_degus
ENSGAFG00000021040puf60b7190.294ENSODEG00000014024-8990.294Octodon_degus
ENSGAFG00000021040puf60b10083.268ENSONIG00000014030-10081.818Oreochromis_niloticus
ENSGAFG00000021040puf60b10097.856ENSONIG00000006247puf60b9897.881Oreochromis_niloticus
ENSGAFG00000021040puf60b9772.200ENSOANG00000006962PUF609870.099Ornithorhynchus_anatinus
ENSGAFG00000021040puf60b10098.635ENSORLG00000012279puf60b10098.635Oryzias_latipes
ENSGAFG00000021040puf60b9982.081ENSORLG00000028655-9981.888Oryzias_latipes
ENSGAFG00000021040puf60b9982.718ENSORLG00020018144-9981.818Oryzias_latipes_hni
ENSGAFG00000021040puf60b10098.635ENSORLG00020007333puf6010098.635Oryzias_latipes_hni
ENSGAFG00000021040puf60b10098.252ENSORLG00015007718puf60b10098.252Oryzias_latipes_hsok
ENSGAFG00000021040puf60b9982.718ENSORLG00015016833-9981.629Oryzias_latipes_hsok
ENSGAFG00000021040puf60b10096.183ENSOMEG00000001643puf60b10095.903Oryzias_melastigma
ENSGAFG00000021040puf60b9982.685ENSOMEG00000022185-9981.784Oryzias_melastigma
ENSGAFG00000021040puf60b10085.605ENSOGAG00000006259PUF609383.491Otolemur_garnettii
ENSGAFG00000021040puf60b10083.977ENSOARG00000016235PUF609881.870Ovis_aries
ENSGAFG00000021040puf60b10085.413ENSPPAG00000029933PUF6010082.617Pan_paniscus
ENSGAFG00000021040puf60b10085.605ENSPPRG00000003257PUF6010084.453Panthera_pardus
ENSGAFG00000021040puf60b10083.301ENSPTIG00000009795PUF609981.214Panthera_tigris_altaica
ENSGAFG00000021040puf60b10085.413ENSPTRG00000043963-9883.302Pan_troglodytes
ENSGAFG00000021040puf60b10085.413ENSPTRG00000020670PUF6010082.617Pan_troglodytes
ENSGAFG00000021040puf60b10085.413ENSPANG00000021936PUF6010082.617Papio_anubis
ENSGAFG00000021040puf60b10089.168ENSPKIG00000004295puf60a9991.940Paramormyrops_kingsleyae
ENSGAFG00000021040puf60b10090.253ENSPKIG00000012204puf60b10091.033Paramormyrops_kingsleyae
ENSGAFG00000021040puf60b10085.221ENSPSIG00000004679PUF609983.681Pelodiscus_sinensis
ENSGAFG00000021040puf60b10095.736ENSPMGG00000013444puf60b10095.367Periophthalmus_magnuspinnatus
ENSGAFG00000021040puf60b10085.797ENSPEMG00000008820Puf609383.871Peromyscus_maniculatus_bairdii
ENSGAFG00000021040puf60b10085.605ENSPCIG00000020270PUF609884.453Phascolarctos_cinereus
ENSGAFG00000021040puf60b10081.942ENSPFOG00000011118-10081.250Poecilia_formosa
ENSGAFG00000021040puf60b10099.805ENSPFOG00000019217puf60b10099.638Poecilia_formosa
ENSGAFG00000021040puf60b10082.330ENSPLAG00000017025-9281.250Poecilia_latipinna
ENSGAFG00000021040puf60b10099.805ENSPLAG00000010754puf60b10099.805Poecilia_latipinna
ENSGAFG00000021040puf60b10099.805ENSPMEG00000000838puf60b10099.805Poecilia_mexicana
ENSGAFG00000021040puf60b10082.136ENSPMEG00000009767-9281.439Poecilia_mexicana
ENSGAFG00000021040puf60b10097.154ENSPREG00000005440puf60b10097.222Poecilia_reticulata
ENSGAFG00000021040puf60b8183.175ENSPPYG00000018951-9581.517Pongo_abelii
ENSGAFG00000021040puf60b8184.834ENSPCAG00000014837PUF6010083.175Procavia_capensis
ENSGAFG00000021040puf60b10085.413ENSPCOG00000027981PUF6010082.617Propithecus_coquereli
ENSGAFG00000021040puf60b10096.203ENSPVAG00000016167PUF608196.203Pteropus_vampyrus
ENSGAFG00000021040puf60b10097.856ENSPNYG00000002556puf60b10097.856Pundamilia_nyererei
ENSGAFG00000021040puf60b10083.463ENSPNYG00000004273-10082.353Pundamilia_nyererei
ENSGAFG00000021040puf60b10084.720ENSPNAG00000019909puf60a9984.866Pygocentrus_nattereri
ENSGAFG00000021040puf60b10080.117ENSPNAG00000019415puf60b9278.195Pygocentrus_nattereri
ENSGAFG00000021040puf60b10085.988ENSRNOG00000009960Puf609384.061Rattus_norvegicus
ENSGAFG00000021040puf60b10085.413ENSRBIG00000035274PUF6010082.617Rhinopithecus_bieti
ENSGAFG00000021040puf60b10085.413ENSRROG00000029360PUF6010082.617Rhinopithecus_roxellana
ENSGAFG00000021040puf60b10084.069ENSSBOG00000027089PUF609981.426Saimiri_boliviensis_boliviensis
ENSGAFG00000021040puf60b9085.075ENSSHAG00000006668PUF609082.737Sarcophilus_harrisii
ENSGAFG00000021040puf60b9589.817ENSSFOG00015019371puf60a9889.817Scleropages_formosus
ENSGAFG00000021040puf60b10082.659ENSSFOG00015019619puf60b9985.772Scleropages_formosus
ENSGAFG00000021040puf60b7698.976ENSSMAG00000016381puf60b7898.366Scophthalmus_maximus
ENSGAFG00000021040puf60b9783.936ENSSDUG00000007048-9783.789Seriola_dumerili
ENSGAFG00000021040puf60b10096.183ENSSDUG00000009935puf60b9996.226Seriola_dumerili
ENSGAFG00000021040puf60b10081.538ENSSLDG00000007366-9981.766Seriola_lalandi_dorsalis
ENSGAFG00000021040puf60b10098.246ENSSLDG00000024011puf60b10095.636Seriola_lalandi_dorsalis
ENSGAFG00000021040puf60b6578.171ENSSPUG00000013518PUF609278.171Sphenodon_punctatus
ENSGAFG00000021040puf60b10083.333ENSSPAG00000020285-10083.721Stegastes_partitus
ENSGAFG00000021040puf60b10095.256ENSSPAG00000012144puf60b10095.256Stegastes_partitus
ENSGAFG00000021040puf60b10085.605ENSSSCG00000038800PUF6010079.813Sus_scrofa
ENSGAFG00000021040puf60b10083.525ENSTGUG00000012797-10082.319Taeniopygia_guttata
ENSGAFG00000021040puf60b10097.466ENSTRUG00000005420puf60b10094.877Takifugu_rubripes
ENSGAFG00000021040puf60b10078.988ENSTRUG00000008843-10078.405Takifugu_rubripes
ENSGAFG00000021040puf60b10097.466ENSTNIG00000013675puf60b9997.495Tetraodon_nigroviridis
ENSGAFG00000021040puf60b10080.117ENSTNIG00000003069-9979.922Tetraodon_nigroviridis
ENSGAFG00000021040puf60b7766.382ENSTBEG00000001899-10067.236Tupaia_belangeri
ENSGAFG00000021040puf60b5586.254ENSTBEG00000002751-9785.911Tupaia_belangeri
ENSGAFG00000021040puf60b10084.261ENSTTRG00000017088PUF6010083.493Tursiops_truncatus
ENSGAFG00000021040puf60b10085.605ENSUAMG00000024917PUF6010082.804Ursus_americanus
ENSGAFG00000021040puf60b10080.614ENSUMAG00000000272PUF609378.368Ursus_maritimus
ENSGAFG00000021040puf60b10085.605ENSVVUG00000022527PUF6010084.453Vulpes_vulpes
ENSGAFG00000021040puf60b10083.877ENSXETG00000012469puf609882.286Xenopus_tropicalis
ENSGAFG00000021040puf60b10096.491ENSXCOG00000012355puf60b10096.491Xiphophorus_couchianus
ENSGAFG00000021040puf60b10079.029ENSXMAG00000010507-9978.311Xiphophorus_maculatus
ENSGAFG00000021040puf60b10099.805ENSXMAG00000001862puf60b10099.805Xiphophorus_maculatus

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