EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000021090 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 40856 bases
Position: chrNHOQ01000244.1:8119408-8160263
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000031299	KH_1	PF00013.29	2.3e-50	1	3
ENSGAFP00000031299	KH_1	PF00013.29	2.3e-50	2	3
ENSGAFP00000031299	KH_1	PF00013.29	2.3e-50	3	3
ENSGAFP00000031299	KH_2	PF07650.17	3.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000031619	-	2326	-	ENSGAFP00000031299	468 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000021090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000021090's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000021090	-	72	61.012	ENSGAFG00000007972	pcbp2	98	61.012
ENSGAFG00000021090	-	60	63.596	ENSGAFG00000017864	zgc:110045	92	63.596
ENSGAFG00000021090	-	68	32.624	ENSGAFG00000010504	igf2bp2b	61	36.250
ENSGAFG00000021090	-	51	36.111	ENSGAFG00000019255	-	57	36.111
ENSGAFG00000021090	-	69	63.497	ENSGAFG00000010274	-	92	63.497
ENSGAFG00000021090	-	70	59.821	ENSGAFG00000011430	pcbp3	94	59.821
ENSGAFG00000021090	-	55	50.769	ENSGAFG00000012633	hnrpkl	61	50.769
ENSGAFG00000021090	-	72	60.714	ENSGAFG00000013273	PCBP2	98	60.714
ENSGAFG00000021090	-	70	30.065	ENSGAFG00000017992	igf2bp3	67	30.065
ENSGAFG00000021090	-	51	54.098	ENSGAFG00000013791	hnrnpk	57	54.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000021090	-	78	59.733	ENSG00000090097	PCBP4	97	74.233	Homo_sapiens
ENSGAFG00000021090	-	78	96.185	ENSAPOG00000009897	-	83	93.915	Acanthochromis_polyacanthus
ENSGAFG00000021090	-	78	60.383	ENSAMEG00000009211	PCBP4	84	60.656	Ailuropoda_melanoleuca
ENSGAFG00000021090	-	67	82.222	ENSACIG00000015264	pcbp4	67	82.222	Amphilophus_citrinellus
ENSGAFG00000021090	-	69	95.975	ENSACIG00000020434	-	81	93.413	Amphilophus_citrinellus
ENSGAFG00000021090	-	73	68.919	ENSAOCG00000006924	-	78	68.919	Amphiprion_ocellaris
ENSGAFG00000021090	-	76	91.854	ENSAOCG00000021366	-	82	89.646	Amphiprion_ocellaris
ENSGAFG00000021090	-	73	58.544	ENSAPEG00000009555	-	74	87.245	Amphiprion_percula
ENSGAFG00000021090	-	68	82.555	ENSAPEG00000023157	pcbp4	77	82.555	Amphiprion_percula
ENSGAFG00000021090	-	76	90.278	ENSATEG00000006511	-	82	88.140	Anabas_testudineus
ENSGAFG00000021090	-	67	74.051	ENSATEG00000008529	pcbp4	71	74.051	Anabas_testudineus
ENSGAFG00000021090	-	74	64.943	ENSACAG00000011701	PCBP4	78	64.943	Anolis_carolinensis
ENSGAFG00000021090	-	78	59.733	ENSANAG00000023072	PCBP4	86	60.000	Aotus_nancymaae
ENSGAFG00000021090	-	78	80.000	ENSACLG00000013348	pcbp4	78	77.444	Astatotilapia_calliptera
ENSGAFG00000021090	-	78	95.640	ENSACLG00000025246	-	83	93.386	Astatotilapia_calliptera
ENSGAFG00000021090	-	78	85.676	ENSAMXG00000033125	pcbp4	80	85.676	Astyanax_mexicanus
ENSGAFG00000021090	-	78	60.383	ENSBTAG00000018622	PCBP4	89	61.491	Bos_taurus
ENSGAFG00000021090	-	78	59.733	ENSCJAG00000005783	PCBP4	86	60.000	Callithrix_jacchus
ENSGAFG00000021090	-	78	60.383	ENSCAFG00000010019	PCBP4	84	60.656	Canis_familiaris
ENSGAFG00000021090	-	78	60.383	ENSCAFG00020022361	PCBP4	84	60.656	Canis_lupus_dingo
ENSGAFG00000021090	-	78	60.383	ENSCHIG00000012918	PCBP4	84	60.656	Capra_hircus
ENSGAFG00000021090	-	78	60.383	ENSTSYG00000008765	PCBP4	84	60.656	Carlito_syrichta
ENSGAFG00000021090	-	78	60.109	ENSCAPG00000005895	PCBP4	84	60.109	Cavia_aperea
ENSGAFG00000021090	-	78	60.109	ENSCPOG00000014617	PCBP4	84	60.383	Cavia_porcellus
ENSGAFG00000021090	-	78	59.733	ENSCCAG00000033268	PCBP4	86	60.000	Cebus_capucinus
ENSGAFG00000021090	-	78	59.733	ENSCATG00000032034	PCBP4	86	60.000	Cercocebus_atys
ENSGAFG00000021090	-	78	60.109	ENSCLAG00000008356	PCBP4	84	60.383	Chinchilla_lanigera
ENSGAFG00000021090	-	78	59.733	ENSCSAG00000013913	PCBP4	86	60.000	Chlorocebus_sabaeus
ENSGAFG00000021090	-	77	63.295	ENSCPBG00000016554	PCBP4	76	64.655	Chrysemys_picta_bellii
ENSGAFG00000021090	-	78	59.733	ENSCANG00000038865	PCBP4	86	60.000	Colobus_angolensis_palliatus
ENSGAFG00000021090	-	78	60.383	ENSCGRG00001014953	Pcbp4	84	60.656	Cricetulus_griseus_chok1gshd
ENSGAFG00000021090	-	78	60.383	ENSCGRG00000008617	Pcbp4	84	60.656	Cricetulus_griseus_crigri
ENSGAFG00000021090	-	75	78.393	ENSCSEG00000014487	pcbp4	72	77.961	Cynoglossus_semilaevis
ENSGAFG00000021090	-	78	81.199	ENSCSEG00000021041	PCBP4	81	81.199	Cynoglossus_semilaevis
ENSGAFG00000021090	-	81	95.767	ENSCVAG00000013090	-	83	95.767	Cyprinodon_variegatus
ENSGAFG00000021090	-	69	72.699	ENSCVAG00000003674	pcbp4	78	68.831	Cyprinodon_variegatus
ENSGAFG00000021090	-	78	85.405	ENSDARG00000024276	pcbp4	97	74.269	Danio_rerio
ENSGAFG00000021090	-	74	77.778	ENSDNOG00000033951	PCBP4	73	77.778	Dasypus_novemcinctus
ENSGAFG00000021090	-	78	59.726	ENSDORG00000000573	Pcbp4	84	60.274	Dipodomys_ordii
ENSGAFG00000021090	-	62	56.410	ENSETEG00000001778	PCBP4	96	56.410	Echinops_telfairi
ENSGAFG00000021090	-	78	60.109	ENSEASG00005012889	PCBP4	84	60.383	Equus_asinus_asinus
ENSGAFG00000021090	-	78	60.109	ENSECAG00000024218	PCBP4	84	60.383	Equus_caballus
ENSGAFG00000021090	-	78	83.740	ENSELUG00000018204	pcbp4	80	83.740	Esox_lucius
ENSGAFG00000021090	-	78	88.679	ENSELUG00000001870	-	80	88.679	Esox_lucius
ENSGAFG00000021090	-	78	60.383	ENSFCAG00000009148	PCBP4	84	60.656	Felis_catus
ENSGAFG00000021090	-	77	63.218	ENSFALG00000008831	PCBP4	78	63.218	Ficedula_albicollis
ENSGAFG00000021090	-	78	60.109	ENSFDAG00000012692	PCBP4	99	54.359	Fukomys_damarensis
ENSGAFG00000021090	-	75	61.890	ENSFHEG00000002769	-	75	61.890	Fundulus_heteroclitus
ENSGAFG00000021090	-	76	90.141	ENSGMOG00000017799	-	79	90.141	Gadus_morhua
ENSGAFG00000021090	-	74	62.644	ENSGALG00000027695	PCBP4	77	62.644	Gallus_gallus
ENSGAFG00000021090	-	78	89.702	ENSGACG00000002664	-	83	90.515	Gasterosteus_aculeatus
ENSGAFG00000021090	-	77	63.584	ENSGAGG00000022116	PCBP4	76	64.943	Gopherus_agassizii
ENSGAFG00000021090	-	78	59.733	ENSGGOG00000012474	PCBP4	86	60.000	Gorilla_gorilla
ENSGAFG00000021090	-	78	95.640	ENSHBUG00000005329	-	83	93.386	Haplochromis_burtoni
ENSGAFG00000021090	-	78	80.000	ENSHBUG00000009472	pcbp4	76	80.000	Haplochromis_burtoni
ENSGAFG00000021090	-	78	60.383	ENSHGLG00000012018	PCBP4	84	60.656	Heterocephalus_glaber_female
ENSGAFG00000021090	-	78	58.266	ENSHGLG00100008748	PCBP4	84	58.537	Heterocephalus_glaber_male
ENSGAFG00000021090	-	81	85.224	ENSHCOG00000010838	-	75	96.053	Hippocampus_comes
ENSGAFG00000021090	-	78	84.595	ENSIPUG00000008212	pcbp4	81	84.595	Ictalurus_punctatus
ENSGAFG00000021090	-	78	58.197	ENSSTOG00000002573	PCBP4	89	63.975	Ictidomys_tridecemlineatus
ENSGAFG00000021090	-	78	60.383	ENSJJAG00000016235	Pcbp4	84	60.656	Jaculus_jaculus
ENSGAFG00000021090	-	81	93.915	ENSKMAG00000017554	-	99	79.154	Kryptolebias_marmoratus
ENSGAFG00000021090	-	76	82.682	ENSKMAG00000014252	pcbp4	74	82.682	Kryptolebias_marmoratus
ENSGAFG00000021090	-	81	93.386	ENSLBEG00000011345	-	83	93.386	Labrus_bergylta
ENSGAFG00000021090	-	78	67.568	ENSLACG00000015899	PCBP4	98	72.414	Latimeria_chalumnae
ENSGAFG00000021090	-	78	82.656	ENSLOCG00000013402	pcbp4	81	82.656	Lepisosteus_oculatus
ENSGAFG00000021090	-	71	57.186	ENSLAFG00000010732	PCBP4	85	57.485	Loxodonta_africana
ENSGAFG00000021090	-	78	59.733	ENSMFAG00000001431	PCBP4	86	60.000	Macaca_fascicularis
ENSGAFG00000021090	-	78	59.733	ENSMMUG00000022205	PCBP4	94	63.333	Macaca_mulatta
ENSGAFG00000021090	-	78	59.733	ENSMNEG00000028553	PCBP4	86	60.000	Macaca_nemestrina
ENSGAFG00000021090	-	78	59.733	ENSMLEG00000027083	PCBP4	86	60.000	Mandrillus_leucophaeus
ENSGAFG00000021090	-	81	93.651	ENSMAMG00000011364	-	83	93.651	Mastacembelus_armatus
ENSGAFG00000021090	-	78	78.068	ENSMAMG00000010163	pcbp4	77	78.068	Mastacembelus_armatus
ENSGAFG00000021090	-	78	95.640	ENSMZEG00005023631	-	83	93.386	Maylandia_zebra
ENSGAFG00000021090	-	78	80.000	ENSMZEG00005008852	pcbp4	76	80.000	Maylandia_zebra
ENSGAFG00000021090	-	51	73.118	ENSMGAG00000005091	-	85	73.118	Meleagris_gallopavo
ENSGAFG00000021090	-	78	60.383	ENSMAUG00000021064	Pcbp4	84	60.656	Mesocricetus_auratus
ENSGAFG00000021090	-	78	60.383	ENSMICG00000002686	PCBP4	84	60.656	Microcebus_murinus
ENSGAFG00000021090	-	78	60.929	ENSMOCG00000013557	Pcbp4	84	61.202	Microtus_ochrogaster
ENSGAFG00000021090	-	78	87.738	ENSMMOG00000020533	-	82	87.738	Mola_mola
ENSGAFG00000021090	-	68	61.709	ENSMMOG00000017756	pcbp4	97	61.709	Mola_mola
ENSGAFG00000021090	-	74	61.960	ENSMODG00000011790	PCBP4	66	62.248	Monodelphis_domestica
ENSGAFG00000021090	-	73	96.797	ENSMALG00000022117	-	77	96.711	Monopterus_albus
ENSGAFG00000021090	-	78	79.156	ENSMALG00000020318	pcbp4	80	79.420	Monopterus_albus
ENSGAFG00000021090	-	78	60.383	MGP_CAROLIEiJ_G0032623	Pcbp4	93	75.543	Mus_caroli
ENSGAFG00000021090	-	78	60.383	ENSMUSG00000023495	Pcbp4	91	80.000	Mus_musculus
ENSGAFG00000021090	-	78	60.383	MGP_PahariEiJ_G0015491	Pcbp4	93	75.543	Mus_pahari
ENSGAFG00000021090	-	78	60.383	MGP_SPRETEiJ_G0033768	-	93	75.543	Mus_spretus
ENSGAFG00000021090	-	78	60.383	ENSMPUG00000011766	PCBP4	84	60.656	Mustela_putorius_furo
ENSGAFG00000021090	-	78	60.383	ENSNGAG00000013148	Pcbp4	84	60.656	Nannospalax_galili
ENSGAFG00000021090	-	76	90.730	ENSNBRG00000015885	-	82	88.556	Neolamprologus_brichardi
ENSGAFG00000021090	-	72	66.862	ENSNBRG00000007475	pcbp4	82	66.862	Neolamprologus_brichardi
ENSGAFG00000021090	-	78	59.733	ENSNLEG00000007064	PCBP4	86	60.000	Nomascus_leucogenys
ENSGAFG00000021090	-	71	48.413	ENSMEUG00000006917	PCBP4	82	48.677	Notamacropus_eugenii
ENSGAFG00000021090	-	72	51.467	ENSOPRG00000008763	PCBP4	85	51.467	Ochotona_princeps
ENSGAFG00000021090	-	78	60.109	ENSODEG00000018230	PCBP4	84	60.383	Octodon_degus
ENSGAFG00000021090	-	74	61.561	ENSOANG00000014110	PCBP4	77	61.561	Ornithorhynchus_anatinus
ENSGAFG00000021090	-	78	60.656	ENSOCUG00000025336	PCBP4	84	60.656	Oryctolagus_cuniculus
ENSGAFG00000021090	-	76	90.196	ENSORLG00000009899	-	82	88.043	Oryzias_latipes
ENSGAFG00000021090	-	76	79.272	ENSORLG00000003061	pcbp4	72	79.272	Oryzias_latipes
ENSGAFG00000021090	-	78	95.095	ENSORLG00020001183	-	83	92.857	Oryzias_latipes_hni
ENSGAFG00000021090	-	76	79.272	ENSORLG00015019262	pcbp4	71	79.272	Oryzias_latipes_hsok
ENSGAFG00000021090	-	78	95.640	ENSORLG00015017819	-	83	93.386	Oryzias_latipes_hsok
ENSGAFG00000021090	-	76	76.751	ENSOMEG00000003516	-	73	76.751	Oryzias_melastigma
ENSGAFG00000021090	-	78	96.185	ENSOMEG00000011545	-	83	93.915	Oryzias_melastigma
ENSGAFG00000021090	-	78	60.383	ENSOGAG00000032384	PCBP4	84	60.656	Otolemur_garnettii
ENSGAFG00000021090	-	73	58.480	ENSOARG00000006603	PCBP4	86	58.772	Ovis_aries
ENSGAFG00000021090	-	78	59.733	ENSPPAG00000038764	PCBP4	86	60.000	Pan_paniscus
ENSGAFG00000021090	-	78	60.383	ENSPPRG00000006165	PCBP4	84	60.656	Panthera_pardus
ENSGAFG00000021090	-	78	60.383	ENSPTIG00000005401	PCBP4	80	60.656	Panthera_tigris_altaica
ENSGAFG00000021090	-	78	59.733	ENSPTRG00000014983	PCBP4	86	60.000	Pan_troglodytes
ENSGAFG00000021090	-	78	59.733	ENSPANG00000026222	PCBP4	86	60.000	Papio_anubis
ENSGAFG00000021090	-	78	84.239	ENSPKIG00000010244	pcbp4	81	84.239	Paramormyrops_kingsleyae
ENSGAFG00000021090	-	78	77.929	ENSPKIG00000005487	-	81	77.929	Paramormyrops_kingsleyae
ENSGAFG00000021090	-	89	53.448	ENSPSIG00000011286	PCBP4	96	57.317	Pelodiscus_sinensis
ENSGAFG00000021090	-	78	82.834	ENSPMGG00000022732	-	82	82.834	Periophthalmus_magnuspinnatus
ENSGAFG00000021090	-	69	77.538	ENSPMGG00000000063	pcbp4	75	77.538	Periophthalmus_magnuspinnatus
ENSGAFG00000021090	-	78	60.383	ENSPEMG00000009276	Pcbp4	84	60.656	Peromyscus_maniculatus_bairdii
ENSGAFG00000021090	-	74	63.112	ENSPCIG00000018151	PCBP4	75	63.112	Phascolarctos_cinereus
ENSGAFG00000021090	-	74	77.429	ENSPFOG00000014474	pcbp4	96	81.423	Poecilia_formosa
ENSGAFG00000021090	-	78	99.455	ENSPFOG00000002989	-	80	99.455	Poecilia_formosa
ENSGAFG00000021090	-	59	87.000	ENSPLAG00000011438	-	78	87.000	Poecilia_latipinna
ENSGAFG00000021090	-	59	78.623	ENSPLAG00000023316	pcbp4	64	78.623	Poecilia_latipinna
ENSGAFG00000021090	-	78	85.286	ENSPREG00000017370	-	81	85.286	Poecilia_reticulata
ENSGAFG00000021090	-	53	91.071	ENSPREG00000021498	-	81	91.071	Poecilia_reticulata
ENSGAFG00000021090	-	78	59.733	ENSPPYG00000013822	PCBP4	86	60.000	Pongo_abelii
ENSGAFG00000021090	-	71	52.603	ENSPCAG00000009515	PCBP4	84	52.877	Procavia_capensis
ENSGAFG00000021090	-	78	60.383	ENSPCOG00000027535	PCBP4	84	60.656	Propithecus_coquereli
ENSGAFG00000021090	-	72	49.485	ENSPVAG00000012474	PCBP4	86	48.711	Pteropus_vampyrus
ENSGAFG00000021090	-	71	78.338	ENSPNYG00000019234	pcbp4	76	78.338	Pundamilia_nyererei
ENSGAFG00000021090	-	76	90.730	ENSPNYG00000003098	-	82	88.556	Pundamilia_nyererei
ENSGAFG00000021090	-	78	85.946	ENSPNAG00000025434	pcbp4	80	85.946	Pygocentrus_nattereri
ENSGAFG00000021090	-	78	60.383	ENSRNOG00000012406	Pcbp4	84	60.656	Rattus_norvegicus
ENSGAFG00000021090	-	78	59.733	ENSRBIG00000043793	PCBP4	86	60.000	Rhinopithecus_bieti
ENSGAFG00000021090	-	78	59.733	ENSRROG00000034589	PCBP4	86	60.000	Rhinopithecus_roxellana
ENSGAFG00000021090	-	78	59.733	ENSSBOG00000027029	PCBP4	86	60.000	Saimiri_boliviensis_boliviensis
ENSGAFG00000021090	-	68	59.770	ENSSHAG00000007362	PCBP4	100	59.770	Sarcophilus_harrisii
ENSGAFG00000021090	-	78	78.649	ENSSFOG00015012075	PCBP4	83	77.045	Scleropages_formosus
ENSGAFG00000021090	-	57	84.109	ENSSFOG00015008221	pcbp4	51	84.109	Scleropages_formosus
ENSGAFG00000021090	-	76	83.287	ENSSMAG00000005827	pcbp4	77	78.811	Scophthalmus_maximus
ENSGAFG00000021090	-	81	93.122	ENSSMAG00000009392	-	82	93.122	Scophthalmus_maximus
ENSGAFG00000021090	-	76	91.573	ENSSDUG00000015540	-	81	89.373	Seriola_dumerili
ENSGAFG00000021090	-	68	81.191	ENSSDUG00000017719	pcbp4	75	81.191	Seriola_dumerili
ENSGAFG00000021090	-	50	85.621	ENSSLDG00000024847	-	77	85.621	Seriola_lalandi_dorsalis
ENSGAFG00000021090	-	76	91.573	ENSSLDG00000007851	-	81	89.373	Seriola_lalandi_dorsalis
ENSGAFG00000021090	-	74	58.841	ENSSPUG00000000194	PCBP4	76	58.841	Sphenodon_punctatus
ENSGAFG00000021090	-	59	67.958	ENSSPAG00000019058	-	66	67.958	Stegastes_partitus
ENSGAFG00000021090	-	78	96.458	ENSSPAG00000003033	-	83	94.180	Stegastes_partitus
ENSGAFG00000021090	-	78	60.383	ENSSSCG00000028446	PCBP4	84	60.656	Sus_scrofa
ENSGAFG00000021090	-	72	57.585	ENSTGUG00000006393	PCBP4	96	58.025	Taeniopygia_guttata
ENSGAFG00000021090	-	78	87.193	ENSTRUG00000007426	-	82	87.193	Takifugu_rubripes
ENSGAFG00000021090	-	78	85.014	ENSTNIG00000017887	-	83	85.014	Tetraodon_nigroviridis
ENSGAFG00000021090	-	52	57.627	ENSTTRG00000001443	PCBP4	70	57.627	Tursiops_truncatus
ENSGAFG00000021090	-	74	54.545	ENSUAMG00000020871	PCBP4	84	56.623	Ursus_americanus
ENSGAFG00000021090	-	78	60.000	ENSUMAG00000021609	PCBP4	86	60.000	Ursus_maritimus
ENSGAFG00000021090	-	78	60.383	ENSVVUG00000026857	PCBP4	84	60.656	Vulpes_vulpes
ENSGAFG00000021090	-	75	82.192	ENSXCOG00000000111	-	94	75.200	Xiphophorus_couchianus
ENSGAFG00000021090	-	63	74.333	ENSXMAG00000022188	-	66	74.333	Xiphophorus_maculatus
ENSGAFG00000021090	-	88	74.818	ENSXMAG00000015709	pcbp4	95	70.989	Xiphophorus_maculatus
ENSGAFG00000021090	-	81	97.090	ENSXMAG00000024530	-	83	97.090	Xiphophorus_maculatus