EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000021109 (Gene tree)
Gene ID: -
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 12236 bases
Position: chrNHOQ01000244.1:8946938-8959173
Accession: ZDB-GENE-030131-2575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000031334	PRP1_N	PF06424.12	1.7e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000031654	-	2853	-	ENSGAFP00000031334	950 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000021109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000021109's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000021109	prpf6	96	87.779	ENSG00000101161	PRPF6	100	87.354	Homo_sapiens
ENSGAFG00000021109	prpf6	100	92.879	ENSAPOG00000010395	prpf6	100	92.879	Acanthochromis_polyacanthus
ENSGAFG00000021109	prpf6	96	87.367	ENSAMEG00000001916	PRPF6	99	86.943	Ailuropoda_melanoleuca
ENSGAFG00000021109	prpf6	100	92.982	ENSACIG00000019862	prpf6	100	92.982	Amphilophus_citrinellus
ENSGAFG00000021109	prpf6	100	92.982	ENSAOCG00000012988	prpf6	100	92.982	Amphiprion_ocellaris
ENSGAFG00000021109	prpf6	96	86.667	ENSAPEG00000008301	prpf6	100	86.882	Amphiprion_percula
ENSGAFG00000021109	prpf6	100	92.466	ENSATEG00000005581	prpf6	100	92.466	Anabas_testudineus
ENSGAFG00000021109	prpf6	96	88.523	ENSACAG00000006464	PRPF6	95	88.098	Anolis_carolinensis
ENSGAFG00000021109	prpf6	96	87.779	ENSANAG00000012661	PRPF6	100	87.868	Aotus_nancymaae
ENSGAFG00000021109	prpf6	100	93.189	ENSACLG00000025875	prpf6	100	93.189	Astatotilapia_calliptera
ENSGAFG00000021109	prpf6	97	89.513	ENSAMXG00000001929	prpf6	100	88.012	Astyanax_mexicanus
ENSGAFG00000021109	prpf6	96	88.310	ENSBTAG00000011656	PRPF6	100	87.885	Bos_taurus
ENSGAFG00000021109	prpf6	96	87.779	ENSCJAG00000010616	PRPF6	100	87.354	Callithrix_jacchus
ENSGAFG00000021109	prpf6	96	88.417	ENSCAFG00000013165	PRPF6	100	87.991	Canis_familiaris
ENSGAFG00000021109	prpf6	96	88.417	ENSCAFG00020002050	PRPF6	100	87.991	Canis_lupus_dingo
ENSGAFG00000021109	prpf6	96	88.310	ENSCHIG00000018187	PRPF6	100	87.885	Capra_hircus
ENSGAFG00000021109	prpf6	96	88.417	ENSTSYG00000007814	PRPF6	100	87.991	Carlito_syrichta
ENSGAFG00000021109	prpf6	93	87.677	ENSCAPG00000015077	PRPF6	100	86.805	Cavia_aperea
ENSGAFG00000021109	prpf6	96	89.054	ENSCPOG00000007518	PRPF6	100	88.629	Cavia_porcellus
ENSGAFG00000021109	prpf6	96	84.803	ENSCCAG00000024564	PRPF6	100	84.378	Cebus_capucinus
ENSGAFG00000021109	prpf6	96	87.885	ENSCATG00000037473	PRPF6	100	87.460	Cercocebus_atys
ENSGAFG00000021109	prpf6	96	85.228	ENSCLAG00000003854	PRPF6	100	84.803	Chinchilla_lanigera
ENSGAFG00000021109	prpf6	96	83.316	ENSCSAG00000016742	PRPF6	100	82.893	Chlorocebus_sabaeus
ENSGAFG00000021109	prpf6	80	94.118	ENSCHOG00000003315	-	90	94.118	Choloepus_hoffmanni
ENSGAFG00000021109	prpf6	98	87.201	ENSCPBG00000013964	PRPF6	96	88.298	Chrysemys_picta_bellii
ENSGAFG00000021109	prpf6	96	69.239	ENSCING00000008817	-	99	68.816	Ciona_intestinalis
ENSGAFG00000021109	prpf6	96	87.673	ENSCANG00000038230	PRPF6	100	87.248	Colobus_angolensis_palliatus
ENSGAFG00000021109	prpf6	96	88.842	ENSCGRG00001022666	Prpf6	100	88.417	Cricetulus_griseus_chok1gshd
ENSGAFG00000021109	prpf6	96	91.913	ENSCSEG00000018561	prpf6	100	91.913	Cynoglossus_semilaevis
ENSGAFG00000021109	prpf6	100	92.879	ENSCVAG00000010550	prpf6	100	92.879	Cyprinodon_variegatus
ENSGAFG00000021109	prpf6	100	88.217	ENSDARG00000091367	prpf6	100	89.619	Danio_rerio
ENSGAFG00000021109	prpf6	96	87.779	ENSDNOG00000040544	PRPF6	100	87.460	Dasypus_novemcinctus
ENSGAFG00000021109	prpf6	87	87.617	ENSDORG00000005406	Prpf6	100	87.617	Dipodomys_ordii
ENSGAFG00000021109	prpf6	96	68.172	FBgn0036828	CG6841	99	68.280	Drosophila_melanogaster
ENSGAFG00000021109	prpf6	82	88.235	ENSETEG00000004447	PRPF6	85	85.380	Echinops_telfairi
ENSGAFG00000021109	prpf6	96	82.540	ENSEBUG00000008835	prpf6	100	82.116	Eptatretus_burgeri
ENSGAFG00000021109	prpf6	99	86.378	ENSEASG00005023115	PRPF6	100	88.098	Equus_asinus_asinus
ENSGAFG00000021109	prpf6	96	73.835	ENSECAG00000013983	PRPF6	100	83.847	Equus_caballus
ENSGAFG00000021109	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSGAFG00000021109	prpf6	97	89.926	ENSELUG00000001945	prpf6	94	89.926	Esox_lucius
ENSGAFG00000021109	prpf6	96	88.417	ENSFCAG00000001183	PRPF6	100	87.991	Felis_catus
ENSGAFG00000021109	prpf6	98	81.282	ENSFALG00000006046	-	97	83.138	Ficedula_albicollis
ENSGAFG00000021109	prpf6	96	88.466	ENSFALG00000010326	-	98	88.148	Ficedula_albicollis
ENSGAFG00000021109	prpf6	96	87.566	ENSFDAG00000006451	PRPF6	100	87.982	Fukomys_damarensis
ENSGAFG00000021109	prpf6	100	93.602	ENSFHEG00000000560	prpf6	100	93.602	Fundulus_heteroclitus
ENSGAFG00000021109	prpf6	97	89.396	ENSGMOG00000015622	prpf6	99	88.865	Gadus_morhua
ENSGAFG00000021109	prpf6	96	88.523	ENSGALG00000006001	PRPF6	100	88.204	Gallus_gallus
ENSGAFG00000021109	prpf6	97	91.208	ENSGACG00000002576	prpf6	100	91.208	Gasterosteus_aculeatus
ENSGAFG00000021109	prpf6	98	87.396	ENSGAGG00000008653	PRPF6	96	88.404	Gopherus_agassizii
ENSGAFG00000021109	prpf6	96	87.779	ENSGGOG00000016876	PRPF6	100	87.354	Gorilla_gorilla
ENSGAFG00000021109	prpf6	100	93.189	ENSHBUG00000004496	prpf6	100	93.189	Haplochromis_burtoni
ENSGAFG00000021109	prpf6	96	88.948	ENSHGLG00000009222	PRPF6	100	88.523	Heterocephalus_glaber_female
ENSGAFG00000021109	prpf6	93	88.768	ENSHGLG00100016600	PRPF6	100	88.332	Heterocephalus_glaber_male
ENSGAFG00000021109	prpf6	100	90.815	ENSHCOG00000011513	prpf6	100	90.815	Hippocampus_comes
ENSGAFG00000021109	prpf6	100	87.782	ENSIPUG00000004912	prpf6	100	87.782	Ictalurus_punctatus
ENSGAFG00000021109	prpf6	96	86.518	ENSSTOG00000002922	PRPF6	100	85.669	Ictidomys_tridecemlineatus
ENSGAFG00000021109	prpf6	96	89.054	ENSJJAG00000000836	Prpf6	100	88.629	Jaculus_jaculus
ENSGAFG00000021109	prpf6	99	93.006	ENSKMAG00000017800	prpf6	100	92.776	Kryptolebias_marmoratus
ENSGAFG00000021109	prpf6	100	91.744	ENSLBEG00000012582	prpf6	100	91.744	Labrus_bergylta
ENSGAFG00000021109	prpf6	96	90.420	ENSLOCG00000004827	prpf6	96	89.989	Lepisosteus_oculatus
ENSGAFG00000021109	prpf6	96	87.885	ENSLAFG00000005272	PRPF6	100	87.460	Loxodonta_africana
ENSGAFG00000021109	prpf6	96	87.673	ENSMFAG00000037542	PRPF6	100	87.248	Macaca_fascicularis
ENSGAFG00000021109	prpf6	96	81.529	ENSMMUG00000015558	PRPF6	98	86.135	Macaca_mulatta
ENSGAFG00000021109	prpf6	96	75.424	ENSMNEG00000045555	PRPF6	100	75.000	Macaca_nemestrina
ENSGAFG00000021109	prpf6	100	92.673	ENSMAMG00000010718	prpf6	100	92.673	Mastacembelus_armatus
ENSGAFG00000021109	prpf6	97	93.177	ENSMZEG00005015261	-	100	93.177	Maylandia_zebra
ENSGAFG00000021109	prpf6	90	92.800	ENSMZEG00005026539	prpf6	100	92.800	Maylandia_zebra
ENSGAFG00000021109	prpf6	93	88.550	ENSMGAG00000006634	PRPF6	100	88.222	Meleagris_gallopavo
ENSGAFG00000021109	prpf6	96	88.842	ENSMAUG00000013969	Prpf6	100	88.417	Mesocricetus_auratus
ENSGAFG00000021109	prpf6	84	86.861	ENSMICG00000017793	PRPF6	98	86.806	Microcebus_murinus
ENSGAFG00000021109	prpf6	96	88.735	ENSMOCG00000001701	Prpf6	100	88.310	Microtus_ochrogaster
ENSGAFG00000021109	prpf6	96	92.366	ENSMMOG00000020419	prpf6	100	92.366	Mola_mola
ENSGAFG00000021109	prpf6	93	88.903	ENSMODG00000017051	PRPF6	99	88.409	Monodelphis_domestica
ENSGAFG00000021109	prpf6	95	92.609	ENSMALG00000000089	prpf6	100	92.609	Monopterus_albus
ENSGAFG00000021109	prpf6	96	82.572	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSGAFG00000021109	prpf6	96	88.842	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSGAFG00000021109	prpf6	96	88.842	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSGAFG00000021109	prpf6	96	88.842	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSGAFG00000021109	prpf6	86	87.849	ENSMPUG00000008673	PRPF6	98	87.849	Mustela_putorius_furo
ENSGAFG00000021109	prpf6	96	88.948	ENSNGAG00000003365	Prpf6	100	88.523	Nannospalax_galili
ENSGAFG00000021109	prpf6	100	93.292	ENSNBRG00000015025	prpf6	100	93.292	Neolamprologus_brichardi
ENSGAFG00000021109	prpf6	96	87.673	ENSNLEG00000010208	PRPF6	100	87.248	Nomascus_leucogenys
ENSGAFG00000021109	prpf6	96	84.137	ENSMEUG00000009824	-	90	84.387	Notamacropus_eugenii
ENSGAFG00000021109	prpf6	96	83.103	ENSODEG00000004841	PRPF6	100	82.678	Octodon_degus
ENSGAFG00000021109	prpf6	100	93.189	ENSONIG00000017406	prpf6	100	93.189	Oreochromis_niloticus
ENSGAFG00000021109	prpf6	96	88.735	ENSOANG00000004920	PRPF6	100	88.310	Ornithorhynchus_anatinus
ENSGAFG00000021109	prpf6	95	86.481	ENSOCUG00000014151	PRPF6	100	86.052	Oryctolagus_cuniculus
ENSGAFG00000021109	prpf6	100	92.157	ENSORLG00000009592	prpf6	100	92.157	Oryzias_latipes
ENSGAFG00000021109	prpf6	100	92.260	ENSORLG00020001458	prpf6	100	92.260	Oryzias_latipes_hni
ENSGAFG00000021109	prpf6	100	92.260	ENSORLG00015018762	prpf6	100	92.260	Oryzias_latipes_hsok
ENSGAFG00000021109	prpf6	100	92.466	ENSOMEG00000012174	prpf6	100	92.466	Oryzias_melastigma
ENSGAFG00000021109	prpf6	96	81.529	ENSOGAG00000007573	PRPF6	100	81.104	Otolemur_garnettii
ENSGAFG00000021109	prpf6	96	87.885	ENSOARG00000008776	PRPF6	99	87.460	Ovis_aries
ENSGAFG00000021109	prpf6	96	87.779	ENSPPAG00000008686	PRPF6	100	87.354	Pan_paniscus
ENSGAFG00000021109	prpf6	96	88.417	ENSPPRG00000008497	PRPF6	100	87.991	Panthera_pardus
ENSGAFG00000021109	prpf6	93	88.222	ENSPTIG00000011184	PRPF6	97	87.786	Panthera_tigris_altaica
ENSGAFG00000021109	prpf6	96	87.779	ENSPTRG00000013765	PRPF6	100	87.354	Pan_troglodytes
ENSGAFG00000021109	prpf6	96	87.460	ENSPANG00000024135	PRPF6	100	87.035	Papio_anubis
ENSGAFG00000021109	prpf6	100	86.781	ENSPKIG00000005627	prpf6	99	89.787	Paramormyrops_kingsleyae
ENSGAFG00000021109	prpf6	90	88.095	ENSPSIG00000007717	PRPF6	100	87.642	Pelodiscus_sinensis
ENSGAFG00000021109	prpf6	99	89.659	ENSPMGG00000008925	prpf6	99	88.935	Periophthalmus_magnuspinnatus
ENSGAFG00000021109	prpf6	96	88.842	ENSPEMG00000016036	Prpf6	100	88.417	Peromyscus_maniculatus_bairdii
ENSGAFG00000021109	prpf6	98	83.386	ENSPMAG00000006144	prpf6	100	83.983	Petromyzon_marinus
ENSGAFG00000021109	prpf6	96	88.842	ENSPCIG00000017909	PRPF6	100	88.417	Phascolarctos_cinereus
ENSGAFG00000021109	prpf6	100	93.456	ENSPFOG00000006431	prpf6	99	93.456	Poecilia_formosa
ENSGAFG00000021109	prpf6	100	94.221	ENSPLAG00000005974	prpf6	100	94.221	Poecilia_latipinna
ENSGAFG00000021109	prpf6	100	94.634	ENSPMEG00000009977	prpf6	100	94.634	Poecilia_mexicana
ENSGAFG00000021109	prpf6	100	94.737	ENSPREG00000017993	prpf6	95	94.737	Poecilia_reticulata
ENSGAFG00000021109	prpf6	96	87.248	ENSPPYG00000011256	PRPF6	100	86.823	Pongo_abelii
ENSGAFG00000021109	prpf6	91	91.150	ENSPCAG00000006536	PRPF6	88	91.150	Procavia_capensis
ENSGAFG00000021109	prpf6	96	87.991	ENSPCOG00000016881	PRPF6	100	87.566	Propithecus_coquereli
ENSGAFG00000021109	prpf6	96	82.678	ENSPVAG00000014316	PRPF6	100	82.253	Pteropus_vampyrus
ENSGAFG00000021109	prpf6	100	84.963	ENSPNYG00000001939	prpf6	100	86.540	Pundamilia_nyererei
ENSGAFG00000021109	prpf6	97	90.466	ENSPNAG00000015606	prpf6	100	88.730	Pygocentrus_nattereri
ENSGAFG00000021109	prpf6	96	88.735	ENSRNOG00000051498	Prpf6	100	88.310	Rattus_norvegicus
ENSGAFG00000021109	prpf6	96	87.673	ENSRBIG00000043613	PRPF6	100	87.248	Rhinopithecus_bieti
ENSGAFG00000021109	prpf6	96	84.762	ENSRROG00000040969	PRPF6	100	84.339	Rhinopithecus_roxellana
ENSGAFG00000021109	prpf6	87	82.124	ENSSBOG00000020632	PRPF6	93	80.104	Saimiri_boliviensis_boliviensis
ENSGAFG00000021109	prpf6	96	88.842	ENSSHAG00000016810	PRPF6	100	88.417	Sarcophilus_harrisii
ENSGAFG00000021109	prpf6	95	90.108	ENSSFOG00015020859	prpf6	100	89.677	Scleropages_formosus
ENSGAFG00000021109	prpf6	100	91.331	ENSSMAG00000008112	prpf6	100	91.331	Scophthalmus_maximus
ENSGAFG00000021109	prpf6	100	92.673	ENSSDUG00000016142	prpf6	100	92.673	Seriola_dumerili
ENSGAFG00000021109	prpf6	100	92.673	ENSSLDG00000025283	prpf6	99	92.673	Seriola_lalandi_dorsalis
ENSGAFG00000021109	prpf6	90	87.060	ENSSPUG00000018260	PRPF6	100	86.606	Sphenodon_punctatus
ENSGAFG00000021109	prpf6	100	92.982	ENSSPAG00000015850	prpf6	100	92.982	Stegastes_partitus
ENSGAFG00000021109	prpf6	97	87.016	ENSSSCG00000029119	PRPF6	98	87.413	Sus_scrofa
ENSGAFG00000021109	prpf6	96	88.559	ENSTGUG00000007221	PRPF6	100	88.242	Taeniopygia_guttata
ENSGAFG00000021109	prpf6	100	91.744	ENSTRUG00000002920	prpf6	100	91.744	Takifugu_rubripes
ENSGAFG00000021109	prpf6	96	90.117	ENSTNIG00000017873	prpf6	100	90.032	Tetraodon_nigroviridis
ENSGAFG00000021109	prpf6	85	94.444	ENSTBEG00000005348	PRPF6	75	92.222	Tupaia_belangeri
ENSGAFG00000021109	prpf6	96	88.098	ENSTTRG00000013068	PRPF6	100	87.673	Tursiops_truncatus
ENSGAFG00000021109	prpf6	98	83.871	ENSUMAG00000021631	PRPF6	98	86.369	Ursus_maritimus
ENSGAFG00000021109	prpf6	96	88.417	ENSVVUG00000014948	PRPF6	100	87.991	Vulpes_vulpes
ENSGAFG00000021109	prpf6	96	88.085	ENSXETG00000012054	prpf6	97	87.660	Xenopus_tropicalis
ENSGAFG00000021109	prpf6	100	94.737	ENSXCOG00000008082	prpf6	100	94.737	Xiphophorus_couchianus
ENSGAFG00000021109	prpf6	100	94.634	ENSXMAG00000015581	prpf6	100	94.634	Xiphophorus_maculatus