EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000021131 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5905 bases
Position: chrNHOQ01000252.1:4660-10564
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000031363	zf-C2H2	PF00096.26	1.3e-58	1	10
ENSGAFP00000031363	zf-C2H2	PF00096.26	1.3e-58	2	10
ENSGAFP00000031363	zf-C2H2	PF00096.26	1.3e-58	3	10
ENSGAFP00000031363	zf-C2H2	PF00096.26	1.3e-58	4	10
ENSGAFP00000031363	zf-C2H2	PF00096.26	1.3e-58	5	10
ENSGAFP00000031363	zf-C2H2	PF00096.26	1.3e-58	6	10
ENSGAFP00000031363	zf-C2H2	PF00096.26	1.3e-58	7	10
ENSGAFP00000031363	zf-C2H2	PF00096.26	1.3e-58	8	10
ENSGAFP00000031363	zf-C2H2	PF00096.26	1.3e-58	9	10
ENSGAFP00000031363	zf-C2H2	PF00096.26	1.3e-58	10	10
ENSGAFP00000031363	zf-met	PF12874.7	1.3e-13	1	3
ENSGAFP00000031363	zf-met	PF12874.7	1.3e-13	2	3
ENSGAFP00000031363	zf-met	PF12874.7	1.3e-13	3	3
ENSGAFP00000031363	zf-C2H2_jaz	PF12171.8	1.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000031683	-	1191	-	ENSGAFP00000031363	396 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000021131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000021131's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000021131	-	97	48.657	ENSGAFG00000014188	-	99	49.379
ENSGAFG00000021131	-	93	50.195	ENSGAFG00000013491	-	78	50.195
ENSGAFG00000021131	-	82	56.881	ENSGAFG00000013363	-	86	56.881
ENSGAFG00000021131	-	89	51.852	ENSGAFG00000013366	-	51	51.852
ENSGAFG00000021131	-	81	40.000	ENSGAFG00000003093	scrt2	55	36.765
ENSGAFG00000021131	-	92	47.082	ENSGAFG00000012953	-	81	47.082
ENSGAFG00000021131	-	71	33.146	ENSGAFG00000016353	-	85	33.146
ENSGAFG00000021131	-	95	51.250	ENSGAFG00000018302	-	83	51.250
ENSGAFG00000021131	-	93	55.446	ENSGAFG00000012004	-	68	55.446
ENSGAFG00000021131	-	65	46.275	ENSGAFG00000013457	-	60	46.275
ENSGAFG00000021131	-	82	50.000	ENSGAFG00000017761	-	89	50.000
ENSGAFG00000021131	-	85	40.541	ENSGAFG00000002659	-	67	39.936
ENSGAFG00000021131	-	82	50.481	ENSGAFG00000012083	-	54	50.481
ENSGAFG00000021131	-	94	55.140	ENSGAFG00000021143	-	81	55.140
ENSGAFG00000021131	-	83	59.740	ENSGAFG00000021140	-	99	59.740
ENSGAFG00000021131	-	92	57.073	ENSGAFG00000016595	-	97	55.085
ENSGAFG00000021131	-	95	47.697	ENSGAFG00000001402	-	83	47.697
ENSGAFG00000021131	-	93	50.000	ENSGAFG00000011174	-	73	46.875
ENSGAFG00000021131	-	82	46.154	ENSGAFG00000013605	-	93	46.154
ENSGAFG00000021131	-	73	54.545	ENSGAFG00000018663	-	76	54.545
ENSGAFG00000021131	-	94	43.627	ENSGAFG00000012987	-	78	44.803
ENSGAFG00000021131	-	93	56.989	ENSGAFG00000019072	-	97	56.989
ENSGAFG00000021131	-	75	49.573	ENSGAFG00000013116	-	65	49.573
ENSGAFG00000021131	-	82	49.130	ENSGAFG00000000285	si:dkeyp-113d7.1	50	49.130
ENSGAFG00000021131	-	85	46.445	ENSGAFG00000001481	-	97	46.445
ENSGAFG00000021131	-	93	55.959	ENSGAFG00000012054	-	59	55.959
ENSGAFG00000021131	-	97	41.991	ENSGAFG00000018557	-	52	41.404
ENSGAFG00000021131	-	82	60.406	ENSGAFG00000011924	-	67	60.406
ENSGAFG00000021131	-	96	47.805	ENSGAFG00000013019	-	95	46.829
ENSGAFG00000021131	-	82	36.778	ENSGAFG00000021891	znf319b	87	37.809
ENSGAFG00000021131	-	95	51.613	ENSGAFG00000001156	-	77	51.613
ENSGAFG00000021131	-	82	43.333	ENSGAFG00000013430	-	99	43.333
ENSGAFG00000021131	-	82	47.904	ENSGAFG00000013438	-	88	47.904
ENSGAFG00000021131	-	83	31.250	ENSGAFG00000015673	PRDM15	50	32.168
ENSGAFG00000021131	-	94	50.270	ENSGAFG00000021132	-	66	49.502
ENSGAFG00000021131	-	91	55.512	ENSGAFG00000021139	-	99	55.512
ENSGAFG00000021131	-	82	44.291	ENSGAFG00000014410	-	88	44.291
ENSGAFG00000021131	-	82	46.273	ENSGAFG00000014413	-	69	46.273
ENSGAFG00000021131	-	95	49.246	ENSGAFG00000014419	-	75	49.246
ENSGAFG00000021131	-	91	55.670	ENSGAFG00000011884	-	99	55.670
ENSGAFG00000021131	-	81	38.525	ENSGAFG00000007532	-	73	38.525
ENSGAFG00000021131	-	93	56.286	ENSGAFG00000007098	-	98	58.642
ENSGAFG00000021131	-	77	37.333	ENSGAFG00000008457	zbtb41	73	37.333
ENSGAFG00000021131	-	85	50.637	ENSGAFG00000000037	-	74	48.680
ENSGAFG00000021131	-	90	43.564	ENSGAFG00000012934	-	81	43.564
ENSGAFG00000021131	-	93	41.615	ENSGAFG00000014097	-	71	44.257
ENSGAFG00000021131	-	71	49.104	ENSGAFG00000013048	-	92	46.903
ENSGAFG00000021131	-	83	46.584	ENSGAFG00000005321	zbtb47b	83	46.584
ENSGAFG00000021131	-	97	43.448	ENSGAFG00000000521	-	81	43.448
ENSGAFG00000021131	-	94	56.494	ENSGAFG00000013934	-	98	56.494
ENSGAFG00000021131	-	97	52.402	ENSGAFG00000008274	-	99	51.163
ENSGAFG00000021131	-	92	41.812	ENSGAFG00000013462	-	78	45.270
ENSGAFG00000021131	-	90	46.825	ENSGAFG00000012733	-	71	46.825
ENSGAFG00000021131	-	77	46.729	ENSGAFG00000005214	bcl6b	54	46.729
ENSGAFG00000021131	-	80	34.529	ENSGAFG00000010053	patz1	54	33.476
ENSGAFG00000021131	-	80	36.036	ENSGAFG00000000345	si:dkey-89b17.4	62	34.921
ENSGAFG00000021131	-	89	57.430	ENSGAFG00000011944	-	68	50.852
ENSGAFG00000021131	-	91	50.254	ENSGAFG00000011940	-	79	50.254
ENSGAFG00000021131	-	98	44.000	ENSGAFG00000016322	-	71	44.000
ENSGAFG00000021131	-	91	50.398	ENSGAFG00000007104	-	70	52.862
ENSGAFG00000021131	-	81	38.211	ENSGAFG00000009650	-	54	38.211
ENSGAFG00000021131	-	71	50.000	ENSGAFG00000000266	-	72	50.000
ENSGAFG00000021131	-	92	50.331	ENSGAFG00000013969	-	96	51.531
ENSGAFG00000021131	-	90	56.376	ENSGAFG00000008226	-	79	50.165
ENSGAFG00000021131	-	79	44.643	ENSGAFG00000014303	-	54	44.643
ENSGAFG00000021131	-	93	48.227	ENSGAFG00000013452	-	80	48.227
ENSGAFG00000021131	-	94	57.422	ENSGAFG00000016976	-	75	57.422
ENSGAFG00000021131	-	82	46.769	ENSGAFG00000013616	-	74	46.769
ENSGAFG00000021131	-	83	43.415	ENSGAFG00000002216	znf652	60	38.762
ENSGAFG00000021131	-	82	50.000	ENSGAFG00000018659	-	99	50.000
ENSGAFG00000021131	-	98	57.895	ENSGAFG00000012767	-	83	57.895
ENSGAFG00000021131	-	82	53.086	ENSGAFG00000016093	-	66	53.086
ENSGAFG00000021131	-	89	55.307	ENSGAFG00000011913	si:ch211-161m3.4	76	55.665
ENSGAFG00000021131	-	92	46.250	ENSGAFG00000011287	-	76	46.250
ENSGAFG00000021131	-	93	53.704	ENSGAFG00000011288	-	88	53.704
ENSGAFG00000021131	-	87	46.063	ENSGAFG00000013066	-	77	46.063
ENSGAFG00000021131	-	93	50.510	ENSGAFG00000013069	-	85	50.909
ENSGAFG00000021131	-	82	44.637	ENSGAFG00000013390	-	67	44.637
ENSGAFG00000021131	-	92	45.294	ENSGAFG00000013396	-	81	45.672
ENSGAFG00000021131	-	91	52.234	ENSGAFG00000020499	-	66	52.234
ENSGAFG00000021131	-	78	45.238	ENSGAFG00000003059	gfi1b	73	45.238
ENSGAFG00000021131	-	93	53.659	ENSGAFG00000011998	-	55	53.659
ENSGAFG00000021131	-	93	53.374	ENSGAFG00000011999	-	96	53.374
ENSGAFG00000021131	-	90	46.071	ENSGAFG00000013408	-	91	46.071
ENSGAFG00000021131	-	82	47.059	ENSGAFG00000003150	-	100	44.828
ENSGAFG00000021131	-	93	46.840	ENSGAFG00000013471	-	80	46.840
ENSGAFG00000021131	-	95	37.778	ENSGAFG00000007636	scrt1b	82	37.778
ENSGAFG00000021131	-	92	51.724	ENSGAFG00000014563	-	75	51.724
ENSGAFG00000021131	-	64	51.235	ENSGAFG00000011278	-	61	51.235
ENSGAFG00000021131	-	79	43.137	ENSGAFG00000012945	-	56	43.137
ENSGAFG00000021131	-	83	58.848	ENSGAFG00000011965	-	78	58.333
ENSGAFG00000021131	-	99	42.500	ENSGAFG00000016347	znf668	93	45.370
ENSGAFG00000021131	-	82	48.667	ENSGAFG00000014088	-	62	48.667
ENSGAFG00000021131	-	72	45.745	ENSGAFG00000014085	-	67	44.505
ENSGAFG00000021131	-	84	47.345	ENSGAFG00000013055	-	84	47.345
ENSGAFG00000021131	-	70	48.858	ENSGAFG00000013053	-	53	48.858
ENSGAFG00000021131	-	82	43.007	ENSGAFG00000005337	-	84	38.440
ENSGAFG00000021131	-	91	46.821	ENSGAFG00000014369	-	98	51.031
ENSGAFG00000021131	-	72	47.087	ENSGAFG00000014362	-	58	47.087
ENSGAFG00000021131	-	71	54.911	ENSGAFG00000008204	-	64	54.911
ENSGAFG00000021131	-	92	52.128	ENSGAFG00000016587	-	89	51.712
ENSGAFG00000021131	-	82	43.396	ENSGAFG00000003108	-	78	36.522
ENSGAFG00000021131	-	82	53.757	ENSGAFG00000018422	-	50	53.757
ENSGAFG00000021131	-	95	50.530	ENSGAFG00000013677	-	97	50.530
ENSGAFG00000021131	-	94	48.023	ENSGAFG00000018820	-	86	48.023
ENSGAFG00000021131	-	98	45.972	ENSGAFG00000012977	-	96	45.972
ENSGAFG00000021131	-	77	50.990	ENSGAFG00000010637	-	80	50.990
ENSGAFG00000021131	-	82	55.245	ENSGAFG00000017066	-	70	55.245
ENSGAFG00000021131	-	94	49.275	ENSGAFG00000012069	-	88	58.511
ENSGAFG00000021131	-	93	46.743	ENSGAFG00000007110	-	77	45.063
ENSGAFG00000021131	-	81	40.183	ENSGAFG00000019233	prdm5	81	37.771
ENSGAFG00000021131	-	82	52.657	ENSGAFG00000010983	-	81	52.657
ENSGAFG00000021131	-	91	51.587	ENSGAFG00000011938	-	73	51.587
ENSGAFG00000021131	-	98	43.103	ENSGAFG00000016981	-	92	43.496
ENSGAFG00000021131	-	91	50.254	ENSGAFG00000013000	-	73	50.510
ENSGAFG00000021131	-	91	47.464	ENSGAFG00000013006	-	93	40.286
ENSGAFG00000021131	-	85	52.941	ENSGAFG00000001879	-	70	52.941
ENSGAFG00000021131	-	84	51.456	ENSGAFG00000013911	-	97	51.456
ENSGAFG00000021131	-	82	33.526	ENSGAFG00000003119	-	62	33.143
ENSGAFG00000021131	-	98	52.351	ENSGAFG00000008231	-	82	52.351
ENSGAFG00000021131	-	94	45.079	ENSGAFG00000013420	-	77	45.079
ENSGAFG00000021131	-	85	50.292	ENSGAFG00000020509	-	82	50.292
ENSGAFG00000021131	-	95	48.472	ENSGAFG00000020501	-	71	48.472
ENSGAFG00000021131	-	81	49.782	ENSGAFG00000020503	-	52	49.782
ENSGAFG00000021131	-	82	51.837	ENSGAFG00000020505	-	74	50.000
ENSGAFG00000021131	-	92	45.588	ENSGAFG00000020507	-	76	45.588
ENSGAFG00000021131	-	82	44.583	ENSGAFG00000013624	-	60	44.280
ENSGAFG00000021131	-	82	53.047	ENSGAFG00000018645	-	61	53.047
ENSGAFG00000021131	-	87	34.483	ENSGAFG00000012545	-	65	31.837
ENSGAFG00000021131	-	87	42.276	ENSGAFG00000021427	snai2	65	42.276
ENSGAFG00000021131	-	80	48.000	ENSGAFG00000007528	-	58	48.000
ENSGAFG00000021131	-	93	45.209	ENSGAFG00000011906	-	69	45.370
ENSGAFG00000021131	-	69	46.067	ENSGAFG00000011290	-	60	46.067
ENSGAFG00000021131	-	96	50.633	ENSGAFG00000012035	-	91	51.064
ENSGAFG00000021131	-	82	58.784	ENSGAFG00000011326	-	98	56.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000021131	-	84	52.913	ENSAMXG00000043019	-	90	52.913	Astyanax_mexicanus
ENSGAFG00000021131	-	92	51.037	ENSAMXG00000034096	-	95	51.037	Astyanax_mexicanus
ENSGAFG00000021131	-	83	50.859	ENSAMXG00000044028	-	99	50.859	Astyanax_mexicanus
ENSGAFG00000021131	-	82	53.395	ENSAMXG00000000353	-	96	53.395	Astyanax_mexicanus
ENSGAFG00000021131	-	83	52.809	ENSAMXG00000029783	-	91	52.788	Astyanax_mexicanus
ENSGAFG00000021131	-	82	48.746	ENSBTAG00000040358	-	100	48.746	Bos_taurus
ENSGAFG00000021131	-	82	47.257	ENSBTAG00000014593	-	77	47.603	Bos_taurus
ENSGAFG00000021131	-	82	47.040	ENSCSAG00000000471	-	97	47.040	Chlorocebus_sabaeus
ENSGAFG00000021131	-	83	51.203	ENSCPBG00000002430	-	79	47.987	Chrysemys_picta_bellii
ENSGAFG00000021131	-	93	44.402	ENSCPBG00000009609	-	96	44.402	Chrysemys_picta_bellii
ENSGAFG00000021131	-	86	38.854	ENSDNOG00000047529	-	69	38.854	Dasypus_novemcinctus
ENSGAFG00000021131	-	84	48.973	ENSDNOG00000042588	-	89	48.973	Dasypus_novemcinctus
ENSGAFG00000021131	-	78	48.193	ENSEBUG00000013221	-	80	48.193	Eptatretus_burgeri
ENSGAFG00000021131	-	81	45.048	ENSEBUG00000016164	-	70	45.048	Eptatretus_burgeri
ENSGAFG00000021131	-	98	43.316	ENSEBUG00000016969	-	99	43.316	Eptatretus_burgeri
ENSGAFG00000021131	-	82	50.420	ENSELUG00000019008	-	85	48.039	Esox_lucius
ENSGAFG00000021131	-	82	47.619	ENSFCAG00000043966	-	99	47.619	Felis_catus
ENSGAFG00000021131	-	82	48.598	ENSGGOG00000042802	-	97	48.598	Gorilla_gorilla
ENSGAFG00000021131	-	94	54.348	ENSHCOG00000014713	-	98	56.579	Hippocampus_comes
ENSGAFG00000021131	-	88	53.846	ENSHCOG00000019512	-	98	53.846	Hippocampus_comes
ENSGAFG00000021131	-	81	47.975	ENSMFAG00000008648	-	97	47.975	Macaca_fascicularis
ENSGAFG00000021131	-	81	47.975	ENSMNEG00000001556	-	97	47.975	Macaca_nemestrina
ENSGAFG00000021131	-	82	47.674	ENSMLEG00000007035	-	97	47.674	Mandrillus_leucophaeus
ENSGAFG00000021131	-	83	46.177	ENSMAUG00000015263	-	64	46.177	Mesocricetus_auratus
ENSGAFG00000021131	-	82	48.355	ENSMOCG00000003394	-	62	48.355	Microtus_ochrogaster
ENSGAFG00000021131	-	81	46.203	ENSMODG00000028916	-	64	48.679	Monodelphis_domestica
ENSGAFG00000021131	-	81	45.033	ENSMPUG00000006562	-	56	45.033	Mustela_putorius_furo
ENSGAFG00000021131	-	70	49.738	ENSNBRG00000010194	-	84	48.020	Neolamprologus_brichardi
ENSGAFG00000021131	-	82	48.287	ENSNLEG00000018988	-	97	48.287	Nomascus_leucogenys
ENSGAFG00000021131	-	82	48.910	ENSMEUG00000012153	-	62	48.910	Notamacropus_eugenii
ENSGAFG00000021131	-	83	49.419	ENSMEUG00000006978	-	80	49.419	Notamacropus_eugenii
ENSGAFG00000021131	-	77	40.373	ENSOGAG00000024538	-	59	40.373	Otolemur_garnettii
ENSGAFG00000021131	-	82	48.598	ENSPPAG00000014496	-	97	48.598	Pan_paniscus
ENSGAFG00000021131	-	82	47.674	ENSPANG00000030207	-	97	47.674	Papio_anubis
ENSGAFG00000021131	-	90	46.075	ENSPSIG00000009650	-	74	46.075	Pelodiscus_sinensis
ENSGAFG00000021131	-	82	57.801	ENSPSIG00000010405	-	99	57.801	Pelodiscus_sinensis
ENSGAFG00000021131	-	93	43.137	ENSPSIG00000002565	-	59	43.137	Pelodiscus_sinensis
ENSGAFG00000021131	-	82	46.789	ENSPEMG00000010242	-	63	46.789	Peromyscus_maniculatus_bairdii
ENSGAFG00000021131	-	98	54.825	ENSPLAG00000021062	-	98	54.825	Poecilia_latipinna
ENSGAFG00000021131	-	93	49.291	ENSPLAG00000020710	-	89	43.716	Poecilia_latipinna
ENSGAFG00000021131	-	95	49.180	ENSPLAG00000010389	-	88	46.667	Poecilia_latipinna
ENSGAFG00000021131	-	83	54.967	ENSPCAG00000009106	-	79	54.967	Procavia_capensis
ENSGAFG00000021131	-	86	40.426	ENSPNYG00000024243	-	92	40.426	Pundamilia_nyererei
ENSGAFG00000021131	-	87	51.645	ENSPNAG00000018644	-	93	51.645	Pygocentrus_nattereri
ENSGAFG00000021131	-	83	44.481	ENSSHAG00000001415	-	83	44.481	Sarcophilus_harrisii
ENSGAFG00000021131	-	94	53.247	ENSSDUG00000009534	-	68	53.271	Seriola_dumerili
ENSGAFG00000021131	-	95	53.448	ENSSLDG00000013760	-	93	53.448	Seriola_lalandi_dorsalis
ENSGAFG00000021131	-	89	48.148	ENSSPUG00000007147	-	97	49.231	Sphenodon_punctatus
ENSGAFG00000021131	-	93	49.530	ENSTRUG00000006896	-	95	49.530	Takifugu_rubripes
ENSGAFG00000021131	-	80	49.505	ENSVPAG00000011867	-	89	49.505	Vicugna_pacos
ENSGAFG00000021131	-	92	45.161	ENSXCOG00000009794	-	92	45.161	Xiphophorus_couchianus