EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000021202 (Gene tree)
Gene ID: -
Gene Symbol: zgc:101559
Alias: -
Full Name: zgc:101559
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4052 bases
Position: chrNHOQ01000293.1:1768133-1772184
Accession: ZDB-GENE-041114-122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000031463	MMR_HSR1	PF01926.23	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000031783	-	2991	-	ENSGAFP00000031463	234 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000021202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000021202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000021202	zgc:101559	67	40.385	ENSGAFG00000006846	rab2a	73	40.385
ENSGAFG00000021202	zgc:101559	72	45.833	ENSGAFG00000000918	-	81	45.833
ENSGAFG00000021202	zgc:101559	78	39.560	ENSGAFG00000016549	rab11a	84	39.560
ENSGAFG00000021202	zgc:101559	71	48.503	ENSGAFG00000020309	rab30	85	48.503
ENSGAFG00000021202	zgc:101559	63	42.857	ENSGAFG00000017305	RAB15	83	44.000
ENSGAFG00000021202	zgc:101559	73	40.936	ENSGAFG00000011619	rab5aa	77	40.936
ENSGAFG00000021202	zgc:101559	74	41.040	ENSGAFG00000007102	rab11bb	78	41.040
ENSGAFG00000021202	zgc:101559	55	32.857	ENSGAFG00000017776	arl8a	74	32.857
ENSGAFG00000021202	zgc:101559	78	38.798	ENSGAFG00000011713	rab25a	77	56.250
ENSGAFG00000021202	zgc:101559	63	41.892	ENSGAFG00000002141	rab42a	67	41.892
ENSGAFG00000021202	zgc:101559	74	38.506	ENSGAFG00000014730	-	83	38.506
ENSGAFG00000021202	zgc:101559	74	32.370	ENSGAFG00000018295	si:ch73-116o1.2	81	32.370
ENSGAFG00000021202	zgc:101559	67	31.677	ENSGAFG00000019285	rasl11b	65	31.677
ENSGAFG00000021202	zgc:101559	64	42.282	ENSGAFG00000006356	rab6a	71	42.282
ENSGAFG00000021202	zgc:101559	50	37.607	ENSGAFG00000005188	rabl2	51	37.607
ENSGAFG00000021202	zgc:101559	79	63.731	ENSGAFG00000019659	rab33ba	80	63.731
ENSGAFG00000021202	zgc:101559	73	39.766	ENSGAFG00000000884	rab5c	75	39.766
ENSGAFG00000021202	zgc:101559	51	30.579	ENSGAFG00000014283	arl4aa	60	30.579
ENSGAFG00000021202	zgc:101559	78	39.175	ENSGAFG00000001301	rab22a	96	39.175
ENSGAFG00000021202	zgc:101559	65	36.129	ENSGAFG00000000591	rab9a	71	36.129
ENSGAFG00000021202	zgc:101559	86	36.364	ENSGAFG00000020476	RAB7A	98	36.364
ENSGAFG00000021202	zgc:101559	63	41.497	ENSGAFG00000002756	rab15	68	41.497
ENSGAFG00000021202	zgc:101559	67	45.912	ENSGAFG00000004604	RAB39B	74	45.912
ENSGAFG00000021202	zgc:101559	63	38.667	ENSGAFG00000008183	si:dkey-34d22.5	67	38.667
ENSGAFG00000021202	zgc:101559	73	39.766	ENSGAFG00000003642	-	74	39.766
ENSGAFG00000021202	zgc:101559	64	43.624	ENSGAFG00000019872	rab41	70	43.624
ENSGAFG00000021202	zgc:101559	65	36.076	ENSGAFG00000000629	RAB29	75	36.076
ENSGAFG00000021202	zgc:101559	86	35.885	ENSGAFG00000021688	-	98	35.885
ENSGAFG00000021202	zgc:101559	64	38.562	ENSGAFG00000004099	rab9b	67	38.562
ENSGAFG00000021202	zgc:101559	85	33.175	ENSGAFG00000005477	rab4a	97	33.175
ENSGAFG00000021202	zgc:101559	72	45.238	ENSGAFG00000019305	rab1ba	81	45.238
ENSGAFG00000021202	zgc:101559	74	39.306	ENSGAFG00000005679	rab11ba	78	39.306
ENSGAFG00000021202	zgc:101559	63	34.459	ENSGAFG00000021738	rhebl1	79	34.459
ENSGAFG00000021202	zgc:101559	72	46.429	ENSGAFG00000001289	rab1ab	80	46.429
ENSGAFG00000021202	zgc:101559	65	37.179	ENSGAFG00000020102	si:dkey-13a21.4	75	37.179
ENSGAFG00000021202	zgc:101559	64	40.268	ENSGAFG00000017270	rab6ba	71	40.268
ENSGAFG00000021202	zgc:101559	71	34.132	ENSGAFG00000021765	kras	97	33.673
ENSGAFG00000021202	zgc:101559	79	33.333	ENSGAFG00000021814	hrasb	97	33.838
ENSGAFG00000021202	zgc:101559	63	40.816	ENSGAFG00000008560	rab18b	71	40.816
ENSGAFG00000021202	zgc:101559	70	45.122	ENSGAFG00000005388	si:dkey-16l2.16	76	45.122
ENSGAFG00000021202	zgc:101559	74	46.243	ENSGAFG00000015702	zgc:171927	67	46.243
ENSGAFG00000021202	zgc:101559	86	59.901	ENSGAFG00000015490	rab33a	73	59.901
ENSGAFG00000021202	zgc:101559	66	45.806	ENSGAFG00000006932	-	72	45.806
ENSGAFG00000021202	zgc:101559	87	30.542	ENSGAFG00000010541	rras	97	30.542
ENSGAFG00000021202	zgc:101559	70	34.146	ENSGAFG00000007684	rab23	71	35.811
ENSGAFG00000021202	zgc:101559	74	30.636	ENSGAFG00000020906	rheb	93	30.636
ENSGAFG00000021202	zgc:101559	80	31.795	ENSGAFG00000007473	rasl11a	76	31.795
ENSGAFG00000021202	zgc:101559	63	42.177	ENSGAFG00000002790	rab18a	71	42.177
ENSGAFG00000021202	zgc:101559	79	38.021	ENSGAFG00000014787	-	96	38.021
ENSGAFG00000021202	zgc:101559	85	45.909	ENSGAFG00000015249	-	99	44.770
ENSGAFG00000021202	zgc:101559	68	34.706	ENSGAFG00000018916	-	75	34.706
ENSGAFG00000021202	zgc:101559	74	38.150	ENSGAFG00000021725	rab11al	79	38.150
ENSGAFG00000021202	zgc:101559	84	36.634	ENSGAFG00000021724	rab25b	94	36.634
ENSGAFG00000021202	zgc:101559	71	34.706	ENSGAFG00000015135	rab36	64	34.706
ENSGAFG00000021202	zgc:101559	74	38.506	ENSGAFG00000010916	rab6bb	81	38.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000021202	zgc:101559	100	83.333	ENSAPOG00000007503	zgc:101559	100	83.333	Acanthochromis_polyacanthus
ENSGAFG00000021202	zgc:101559	90	84.762	ENSACIG00000021459	zgc:101559	92	84.762	Amphilophus_citrinellus
ENSGAFG00000021202	zgc:101559	100	84.188	ENSAOCG00000024675	zgc:101559	100	84.188	Amphiprion_ocellaris
ENSGAFG00000021202	zgc:101559	100	84.188	ENSAPEG00000005176	zgc:101559	100	84.188	Amphiprion_percula
ENSGAFG00000021202	zgc:101559	100	82.479	ENSATEG00000007761	zgc:101559	100	82.479	Anabas_testudineus
ENSGAFG00000021202	zgc:101559	99	82.833	ENSACLG00000027006	zgc:101559	99	82.833	Astatotilapia_calliptera
ENSGAFG00000021202	zgc:101559	99	73.707	ENSAMXG00000040460	zgc:101559	94	73.707	Astyanax_mexicanus
ENSGAFG00000021202	zgc:101559	100	75.641	ENSCSEG00000006243	zgc:101559	100	75.641	Cynoglossus_semilaevis
ENSGAFG00000021202	zgc:101559	100	91.453	ENSCVAG00000019227	zgc:101559	100	91.453	Cyprinodon_variegatus
ENSGAFG00000021202	zgc:101559	100	72.340	ENSDARG00000003257	zgc:101559	100	72.340	Danio_rerio
ENSGAFG00000021202	zgc:101559	100	88.889	ENSFHEG00000011483	zgc:101559	100	88.889	Fundulus_heteroclitus
ENSGAFG00000021202	zgc:101559	91	81.132	ENSGMOG00000011665	zgc:101559	99	81.132	Gadus_morhua
ENSGAFG00000021202	zgc:101559	91	80.189	ENSGACG00000001725	zgc:101559	91	80.189	Gasterosteus_aculeatus
ENSGAFG00000021202	zgc:101559	100	82.906	ENSHBUG00000007827	zgc:101559	100	82.906	Haplochromis_burtoni
ENSGAFG00000021202	zgc:101559	100	74.576	ENSHCOG00000009133	zgc:101559	100	76.471	Hippocampus_comes
ENSGAFG00000021202	zgc:101559	92	70.833	ENSIPUG00000022394	zgc:101559	93	70.833	Ictalurus_punctatus
ENSGAFG00000021202	zgc:101559	100	82.979	ENSKMAG00000002862	zgc:101559	100	82.979	Kryptolebias_marmoratus
ENSGAFG00000021202	zgc:101559	100	82.051	ENSLBEG00000025798	zgc:101559	100	82.051	Labrus_bergylta
ENSGAFG00000021202	zgc:101559	85	67.164	ENSLACG00000011557	zgc:101559	87	67.164	Latimeria_chalumnae
ENSGAFG00000021202	zgc:101559	100	68.803	ENSLOCG00000005904	zgc:101559	99	68.803	Lepisosteus_oculatus
ENSGAFG00000021202	zgc:101559	100	81.624	ENSMAMG00000017431	zgc:101559	100	81.624	Mastacembelus_armatus
ENSGAFG00000021202	zgc:101559	100	82.906	ENSMZEG00005021778	zgc:101559	100	82.906	Maylandia_zebra
ENSGAFG00000021202	zgc:101559	100	80.342	ENSMMOG00000019779	zgc:101559	100	80.342	Mola_mola
ENSGAFG00000021202	zgc:101559	100	78.632	ENSMALG00000003712	zgc:101559	100	78.632	Monopterus_albus
ENSGAFG00000021202	zgc:101559	100	82.051	ENSNBRG00000002684	zgc:101559	100	82.051	Neolamprologus_brichardi
ENSGAFG00000021202	zgc:101559	100	82.906	ENSONIG00000006715	-	100	82.906	Oreochromis_niloticus
ENSGAFG00000021202	zgc:101559	100	82.051	ENSORLG00000030642	zgc:101559	100	82.051	Oryzias_latipes
ENSGAFG00000021202	zgc:101559	100	82.051	ENSORLG00020012685	zgc:101559	100	82.051	Oryzias_latipes_hni
ENSGAFG00000021202	zgc:101559	100	81.624	ENSORLG00015016047	zgc:101559	100	81.624	Oryzias_latipes_hsok
ENSGAFG00000021202	zgc:101559	100	84.188	ENSOMEG00000013128	zgc:101559	100	84.188	Oryzias_melastigma
ENSGAFG00000021202	zgc:101559	86	74.752	ENSPKIG00000013397	zgc:101559	85	74.752	Paramormyrops_kingsleyae
ENSGAFG00000021202	zgc:101559	100	94.872	ENSPFOG00000009101	-	100	94.872	Poecilia_formosa
ENSGAFG00000021202	zgc:101559	100	94.444	ENSPLAG00000020627	zgc:101559	100	94.444	Poecilia_latipinna
ENSGAFG00000021202	zgc:101559	100	95.299	ENSPMEG00000010152	zgc:101559	100	95.299	Poecilia_mexicana
ENSGAFG00000021202	zgc:101559	100	95.299	ENSPREG00000007017	zgc:101559	100	95.299	Poecilia_reticulata
ENSGAFG00000021202	zgc:101559	100	82.906	ENSPNYG00000012922	zgc:101559	100	82.906	Pundamilia_nyererei
ENSGAFG00000021202	zgc:101559	99	73.391	ENSPNAG00000017856	zgc:101559	100	73.391	Pygocentrus_nattereri
ENSGAFG00000021202	zgc:101559	97	69.163	ENSSFOG00015006175	zgc:101559	97	69.163	Scleropages_formosus
ENSGAFG00000021202	zgc:101559	99	81.116	ENSSMAG00000002229	zgc:101559	99	81.116	Scophthalmus_maximus
ENSGAFG00000021202	zgc:101559	100	85.043	ENSSDUG00000008151	zgc:101559	100	85.043	Seriola_dumerili
ENSGAFG00000021202	zgc:101559	100	85.043	ENSSLDG00000019214	zgc:101559	100	85.043	Seriola_lalandi_dorsalis
ENSGAFG00000021202	zgc:101559	100	85.043	ENSSPAG00000006404	zgc:101559	100	85.043	Stegastes_partitus
ENSGAFG00000021202	zgc:101559	100	78.632	ENSTRUG00000009903	zgc:101559	100	78.632	Takifugu_rubripes
ENSGAFG00000021202	zgc:101559	93	78.899	ENSTNIG00000015000	zgc:101559	93	78.539	Tetraodon_nigroviridis
ENSGAFG00000021202	zgc:101559	100	96.154	ENSXCOG00000018683	zgc:101559	100	96.154	Xiphophorus_couchianus
ENSGAFG00000021202	zgc:101559	100	96.154	ENSXMAG00000011171	zgc:101559	100	96.154	Xiphophorus_maculatus