EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000021464 (Gene tree)
Gene ID: -
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6885 bases
Position: chrNHOQ01001318.1:8767404-8774288
Accession: ZDB-GENE-030826-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000031889	efThoc1	PF11957.8	5.2e-143	1	1
ENSGAFP00000031888	efThoc1	PF11957.8	5.7e-143	1	1
ENSGAFP00000031890	efThoc1	PF11957.8	3.7e-130	1	2
ENSGAFP00000031890	efThoc1	PF11957.8	3.7e-130	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000032211	-	2300	-	ENSGAFP00000031888	654 (aa)	-	UPI000DD261E2
ENSGAFT00000032212	-	2249	-	ENSGAFP00000031889	637 (aa)	-	-
ENSGAFT00000032213	-	1818	-	ENSGAFP00000031890	605 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000021464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000021464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000021464	thoc1	99	71.933	ENSG00000079134	THOC1	99	79.044	Homo_sapiens
ENSGAFG00000021464	thoc1	99	72.239	ENSAMEG00000006645	THOC1	98	72.239	Ailuropoda_melanoleuca
ENSGAFG00000021464	thoc1	98	84.483	ENSACIG00000019392	thoc1	95	88.274	Amphilophus_citrinellus
ENSGAFG00000021464	thoc1	99	90.744	ENSAOCG00000008391	thoc1	97	90.744	Amphiprion_ocellaris
ENSGAFG00000021464	thoc1	100	91.437	ENSAPEG00000001093	thoc1	100	91.437	Amphiprion_percula
ENSGAFG00000021464	thoc1	100	89.908	ENSATEG00000004783	thoc1	100	89.908	Anabas_testudineus
ENSGAFG00000021464	thoc1	99	71.835	ENSAPLG00000016149	THOC1	97	71.981	Anas_platyrhynchos
ENSGAFG00000021464	thoc1	99	71.407	ENSACAG00000008307	THOC1	96	70.795	Anolis_carolinensis
ENSGAFG00000021464	thoc1	99	71.320	ENSANAG00000033200	THOC1	98	71.320	Aotus_nancymaae
ENSGAFG00000021464	thoc1	100	89.297	ENSACLG00000016836	thoc1	100	89.297	Astatotilapia_calliptera
ENSGAFG00000021464	thoc1	94	75.159	ENSAMXG00000014708	thoc1	98	74.482	Astyanax_mexicanus
ENSGAFG00000021464	thoc1	99	72.239	ENSBTAG00000019215	THOC1	98	72.239	Bos_taurus
ENSGAFG00000021464	thoc1	71	34.914	WBGene00020172	thoc-1	69	34.904	Caenorhabditis_elegans
ENSGAFG00000021464	thoc1	99	72.086	ENSCJAG00000020450	THOC1	98	72.086	Callithrix_jacchus
ENSGAFG00000021464	thoc1	99	72.239	ENSCAFG00000018324	THOC1	98	72.239	Canis_familiaris
ENSGAFG00000021464	thoc1	99	72.239	ENSCAFG00020017894	THOC1	98	72.239	Canis_lupus_dingo
ENSGAFG00000021464	thoc1	99	72.239	ENSCHIG00000015399	THOC1	98	73.270	Capra_hircus
ENSGAFG00000021464	thoc1	99	71.933	ENSTSYG00000010585	THOC1	98	71.933	Carlito_syrichta
ENSGAFG00000021464	thoc1	99	55.665	ENSCAPG00000016270	THOC1	97	55.665	Cavia_aperea
ENSGAFG00000021464	thoc1	98	72.408	ENSCPOG00000000959	THOC1	98	71.319	Cavia_porcellus
ENSGAFG00000021464	thoc1	99	72.086	ENSCCAG00000025766	THOC1	98	72.086	Cebus_capucinus
ENSGAFG00000021464	thoc1	99	69.785	ENSCATG00000028180	THOC1	96	75.575	Cercocebus_atys
ENSGAFG00000021464	thoc1	96	74.141	ENSCLAG00000009117	THOC1	99	73.113	Chinchilla_lanigera
ENSGAFG00000021464	thoc1	99	72.086	ENSCSAG00000017631	THOC1	98	72.086	Chlorocebus_sabaeus
ENSGAFG00000021464	thoc1	79	75.519	ENSCHOG00000010609	THOC1	78	75.519	Choloepus_hoffmanni
ENSGAFG00000021464	thoc1	99	72.741	ENSCPBG00000027558	THOC1	99	72.741	Chrysemys_picta_bellii
ENSGAFG00000021464	thoc1	76	46.869	ENSCING00000007663	-	99	46.881	Ciona_intestinalis
ENSGAFG00000021464	thoc1	96	47.536	ENSCSAVG00000010649	-	100	48.101	Ciona_savignyi
ENSGAFG00000021464	thoc1	99	71.933	ENSCANG00000034265	THOC1	96	75.942	Colobus_angolensis_palliatus
ENSGAFG00000021464	thoc1	99	71.860	ENSCGRG00001016464	Thoc1	98	71.166	Cricetulus_griseus_chok1gshd
ENSGAFG00000021464	thoc1	90	60.034	ENSCGRG00000003390	-	97	60.034	Cricetulus_griseus_crigri
ENSGAFG00000021464	thoc1	99	71.362	ENSCGRG00000010269	-	99	72.327	Cricetulus_griseus_crigri
ENSGAFG00000021464	thoc1	99	86.593	ENSCSEG00000012486	thoc1	99	87.299	Cynoglossus_semilaevis
ENSGAFG00000021464	thoc1	100	92.813	ENSCVAG00000020600	thoc1	100	92.813	Cyprinodon_variegatus
ENSGAFG00000021464	thoc1	99	83.016	ENSDARG00000088246	thoc1	100	81.985	Danio_rerio
ENSGAFG00000021464	thoc1	99	72.043	ENSDNOG00000019217	THOC1	98	72.043	Dasypus_novemcinctus
ENSGAFG00000021464	thoc1	97	68.239	ENSDORG00000008060	Thoc1	98	68.239	Dipodomys_ordii
ENSGAFG00000021464	thoc1	98	37.393	FBgn0037382	Hpr1	74	42.182	Drosophila_melanogaster
ENSGAFG00000021464	thoc1	92	55.102	ENSETEG00000004165	THOC1	98	55.102	Echinops_telfairi
ENSGAFG00000021464	thoc1	92	63.289	ENSEBUG00000005998	thoc1	97	64.060	Eptatretus_burgeri
ENSGAFG00000021464	thoc1	99	71.933	ENSEASG00005002549	THOC1	94	71.319	Equus_asinus_asinus
ENSGAFG00000021464	thoc1	99	72.086	ENSECAG00000009267	THOC1	88	72.086	Equus_caballus
ENSGAFG00000021464	thoc1	85	59.574	ENSEEUG00000012214	-	81	59.574	Erinaceus_europaeus
ENSGAFG00000021464	thoc1	99	85.601	ENSELUG00000023277	thoc1	100	84.475	Esox_lucius
ENSGAFG00000021464	thoc1	99	72.546	ENSFCAG00000022454	THOC1	85	72.546	Felis_catus
ENSGAFG00000021464	thoc1	97	72.387	ENSFALG00000006205	THOC1	99	72.387	Ficedula_albicollis
ENSGAFG00000021464	thoc1	98	72.205	ENSFDAG00000006842	THOC1	99	72.205	Fukomys_damarensis
ENSGAFG00000021464	thoc1	100	92.661	ENSFHEG00000008841	thoc1	100	92.661	Fundulus_heteroclitus
ENSGAFG00000021464	thoc1	99	86.169	ENSGMOG00000011486	thoc1	99	85.276	Gadus_morhua
ENSGAFG00000021464	thoc1	99	72.063	ENSGALG00000014915	THOC1	99	70.953	Gallus_gallus
ENSGAFG00000021464	thoc1	100	88.379	ENSGACG00000017361	thoc1	100	88.379	Gasterosteus_aculeatus
ENSGAFG00000021464	thoc1	99	73.354	ENSGAGG00000021230	-	97	73.354	Gopherus_agassizii
ENSGAFG00000021464	thoc1	99	72.086	ENSGGOG00000003013	THOC1	98	72.086	Gorilla_gorilla
ENSGAFG00000021464	thoc1	100	89.602	ENSHBUG00000009096	thoc1	100	89.602	Haplochromis_burtoni
ENSGAFG00000021464	thoc1	93	45.870	ENSHGLG00000009264	-	99	60.606	Heterocephalus_glaber_female
ENSGAFG00000021464	thoc1	99	71.933	ENSHGLG00000003712	-	98	71.933	Heterocephalus_glaber_female
ENSGAFG00000021464	thoc1	99	71.779	ENSHGLG00100003570	THOC1	98	71.779	Heterocephalus_glaber_male
ENSGAFG00000021464	thoc1	82	57.754	ENSHGLG00100002225	-	98	58.201	Heterocephalus_glaber_male
ENSGAFG00000021464	thoc1	91	81.321	ENSIPUG00000005306	thoc1	100	80.189	Ictalurus_punctatus
ENSGAFG00000021464	thoc1	99	72.086	ENSSTOG00000006484	THOC1	98	72.086	Ictidomys_tridecemlineatus
ENSGAFG00000021464	thoc1	57	72.674	ENSJJAG00000014893	-	96	72.674	Jaculus_jaculus
ENSGAFG00000021464	thoc1	100	90.979	ENSKMAG00000003904	thoc1	100	90.979	Kryptolebias_marmoratus
ENSGAFG00000021464	thoc1	100	90.214	ENSLBEG00000020372	thoc1	98	90.214	Labrus_bergylta
ENSGAFG00000021464	thoc1	99	73.810	ENSLACG00000014869	THOC1	99	72.894	Latimeria_chalumnae
ENSGAFG00000021464	thoc1	100	80.670	ENSLOCG00000002097	thoc1	99	80.365	Lepisosteus_oculatus
ENSGAFG00000021464	thoc1	99	72.086	ENSLAFG00000009585	THOC1	98	72.086	Loxodonta_africana
ENSGAFG00000021464	thoc1	99	72.086	ENSMFAG00000041520	THOC1	98	72.086	Macaca_fascicularis
ENSGAFG00000021464	thoc1	99	72.086	ENSMMUG00000004662	THOC1	98	72.086	Macaca_mulatta
ENSGAFG00000021464	thoc1	99	72.086	ENSMNEG00000040177	THOC1	98	72.086	Macaca_nemestrina
ENSGAFG00000021464	thoc1	99	72.086	ENSMLEG00000034201	THOC1	98	72.086	Mandrillus_leucophaeus
ENSGAFG00000021464	thoc1	96	87.560	ENSMAMG00000016747	thoc1	100	87.560	Mastacembelus_armatus
ENSGAFG00000021464	thoc1	100	89.297	ENSMZEG00005024609	thoc1	100	89.297	Maylandia_zebra
ENSGAFG00000021464	thoc1	97	72.144	ENSMGAG00000009811	THOC1	99	72.144	Meleagris_gallopavo
ENSGAFG00000021464	thoc1	99	71.383	ENSMAUG00000010272	Thoc1	98	70.706	Mesocricetus_auratus
ENSGAFG00000021464	thoc1	99	72.239	ENSMICG00000027200	THOC1	98	72.239	Microcebus_murinus
ENSGAFG00000021464	thoc1	99	62.195	ENSMOCG00000014924	-	96	61.585	Microtus_ochrogaster
ENSGAFG00000021464	thoc1	99	70.399	ENSMOCG00000014536	-	85	70.399	Microtus_ochrogaster
ENSGAFG00000021464	thoc1	93	89.379	ENSMMOG00000011772	thoc1	100	89.379	Mola_mola
ENSGAFG00000021464	thoc1	99	71.277	ENSMODG00000021482	THOC1	98	71.277	Monodelphis_domestica
ENSGAFG00000021464	thoc1	100	88.532	ENSMALG00000021872	thoc1	100	88.532	Monopterus_albus
ENSGAFG00000021464	thoc1	98	71.770	MGP_CAROLIEiJ_G0021989	Thoc1	98	70.706	Mus_caroli
ENSGAFG00000021464	thoc1	99	70.859	ENSMUSG00000024287	Thoc1	98	78.873	Mus_musculus
ENSGAFG00000021464	thoc1	99	70.859	MGP_PahariEiJ_G0018726	Thoc1	98	70.859	Mus_pahari
ENSGAFG00000021464	thoc1	99	70.859	MGP_SPRETEiJ_G0022905	Thoc1	98	70.859	Mus_spretus
ENSGAFG00000021464	thoc1	99	72.239	ENSMPUG00000005448	THOC1	98	72.239	Mustela_putorius_furo
ENSGAFG00000021464	thoc1	99	71.012	ENSMLUG00000004090	-	98	71.012	Myotis_lucifugus
ENSGAFG00000021464	thoc1	63	66.579	ENSMLUG00000024912	-	100	65.163	Myotis_lucifugus
ENSGAFG00000021464	thoc1	93	66.275	ENSMLUG00000027965	-	99	66.611	Myotis_lucifugus
ENSGAFG00000021464	thoc1	99	55.326	ENSNGAG00000008061	-	97	57.300	Nannospalax_galili
ENSGAFG00000021464	thoc1	99	71.472	ENSNGAG00000001401	-	98	71.472	Nannospalax_galili
ENSGAFG00000021464	thoc1	98	87.304	ENSNBRG00000005991	thoc1	97	87.304	Neolamprologus_brichardi
ENSGAFG00000021464	thoc1	99	72.086	ENSNLEG00000006835	THOC1	98	72.086	Nomascus_leucogenys
ENSGAFG00000021464	thoc1	89	75.803	ENSMEUG00000009756	THOC1	91	70.878	Notamacropus_eugenii
ENSGAFG00000021464	thoc1	99	57.515	ENSOPRG00000001108	THOC1	98	57.515	Ochotona_princeps
ENSGAFG00000021464	thoc1	99	66.871	ENSODEG00000006623	THOC1	98	66.871	Octodon_degus
ENSGAFG00000021464	thoc1	100	89.450	ENSONIG00000009440	thoc1	98	89.401	Oreochromis_niloticus
ENSGAFG00000021464	thoc1	99	72.239	ENSOCUG00000011601	THOC1	98	72.239	Oryctolagus_cuniculus
ENSGAFG00000021464	thoc1	100	89.602	ENSORLG00000017629	thoc1	100	89.602	Oryzias_latipes
ENSGAFG00000021464	thoc1	100	89.755	ENSORLG00020007567	thoc1	100	89.755	Oryzias_latipes_hni
ENSGAFG00000021464	thoc1	100	89.602	ENSORLG00015007356	thoc1	100	89.602	Oryzias_latipes_hsok
ENSGAFG00000021464	thoc1	100	88.379	ENSOMEG00000008200	thoc1	100	88.226	Oryzias_melastigma
ENSGAFG00000021464	thoc1	99	69.172	ENSOGAG00000000470	THOC1	98	69.172	Otolemur_garnettii
ENSGAFG00000021464	thoc1	98	73.083	ENSOARG00000009238	THOC1	96	73.083	Ovis_aries
ENSGAFG00000021464	thoc1	99	72.086	ENSPPAG00000031812	THOC1	98	72.086	Pan_paniscus
ENSGAFG00000021464	thoc1	99	71.933	ENSPPRG00000023794	THOC1	96	76.149	Panthera_pardus
ENSGAFG00000021464	thoc1	99	71.933	ENSPTIG00000007469	THOC1	96	76.149	Panthera_tigris_altaica
ENSGAFG00000021464	thoc1	99	71.168	ENSPTRG00000009816	THOC1	98	71.168	Pan_troglodytes
ENSGAFG00000021464	thoc1	99	71.189	ENSPANG00000008665	THOC1	98	71.189	Papio_anubis
ENSGAFG00000021464	thoc1	100	81.832	ENSPKIG00000005906	thoc1	100	82.595	Paramormyrops_kingsleyae
ENSGAFG00000021464	thoc1	81	75.758	ENSPSIG00000007691	THOC1	97	75.758	Pelodiscus_sinensis
ENSGAFG00000021464	thoc1	94	84.279	ENSPMGG00000008279	thoc1	95	84.279	Periophthalmus_magnuspinnatus
ENSGAFG00000021464	thoc1	99	71.383	ENSPEMG00000021789	Thoc1	98	70.706	Peromyscus_maniculatus_bairdii
ENSGAFG00000021464	thoc1	74	73.778	ENSPCIG00000026942	THOC1	97	73.778	Phascolarctos_cinereus
ENSGAFG00000021464	thoc1	100	97.554	ENSPFOG00000011673	thoc1	100	97.554	Poecilia_formosa
ENSGAFG00000021464	thoc1	100	97.706	ENSPLAG00000019648	thoc1	100	97.706	Poecilia_latipinna
ENSGAFG00000021464	thoc1	100	97.706	ENSPMEG00000007083	thoc1	100	97.706	Poecilia_mexicana
ENSGAFG00000021464	thoc1	100	98.318	ENSPREG00000006719	thoc1	100	98.318	Poecilia_reticulata
ENSGAFG00000021464	thoc1	76	75.514	ENSPPYG00000009049	-	98	75.514	Pongo_abelii
ENSGAFG00000021464	thoc1	91	73.706	ENSPCAG00000005320	THOC1	91	73.706	Procavia_capensis
ENSGAFG00000021464	thoc1	99	71.472	ENSPCOG00000009234	THOC1	98	71.472	Propithecus_coquereli
ENSGAFG00000021464	thoc1	99	70.484	ENSPVAG00000004007	THOC1	98	70.399	Pteropus_vampyrus
ENSGAFG00000021464	thoc1	100	89.602	ENSPNYG00000019152	thoc1	100	89.602	Pundamilia_nyererei
ENSGAFG00000021464	thoc1	99	82.989	ENSPNAG00000023390	thoc1	99	81.776	Pygocentrus_nattereri
ENSGAFG00000021464	thoc1	91	52.158	ENSRNOG00000015332	Thoc1	94	58.065	Rattus_norvegicus
ENSGAFG00000021464	thoc1	99	71.320	ENSRBIG00000033738	THOC1	99	73.830	Rhinopithecus_bieti
ENSGAFG00000021464	thoc1	99	72.086	ENSRROG00000044988	THOC1	96	75.942	Rhinopithecus_roxellana
ENSGAFG00000021464	thoc1	99	71.779	ENSSBOG00000016556	THOC1	98	71.779	Saimiri_boliviensis_boliviensis
ENSGAFG00000021464	thoc1	99	72.086	ENSSHAG00000014829	THOC1	98	72.086	Sarcophilus_harrisii
ENSGAFG00000021464	thoc1	100	84.796	ENSSFOG00015021527	thoc1	100	84.709	Scleropages_formosus
ENSGAFG00000021464	thoc1	100	87.003	ENSSMAG00000018465	thoc1	99	87.003	Scophthalmus_maximus
ENSGAFG00000021464	thoc1	100	90.214	ENSSDUG00000016810	thoc1	100	90.214	Seriola_dumerili
ENSGAFG00000021464	thoc1	100	90.214	ENSSLDG00000015555	thoc1	100	90.214	Seriola_lalandi_dorsalis
ENSGAFG00000021464	thoc1	86	73.663	ENSSARG00000006910	THOC1	84	73.663	Sorex_araneus
ENSGAFG00000021464	thoc1	98	71.073	ENSSPUG00000007238	THOC1	98	70.769	Sphenodon_punctatus
ENSGAFG00000021464	thoc1	100	85.976	ENSSPAG00000018847	thoc1	99	85.976	Stegastes_partitus
ENSGAFG00000021464	thoc1	99	73.256	ENSSSCG00000025653	THOC1	93	72.239	Sus_scrofa
ENSGAFG00000021464	thoc1	99	72.381	ENSTGUG00000010204	THOC1	99	71.975	Taeniopygia_guttata
ENSGAFG00000021464	thoc1	100	87.768	ENSTRUG00000013518	thoc1	100	87.768	Takifugu_rubripes
ENSGAFG00000021464	thoc1	100	87.003	ENSTNIG00000008473	thoc1	99	87.003	Tetraodon_nigroviridis
ENSGAFG00000021464	thoc1	99	65.501	ENSTBEG00000016920	THOC1	98	65.031	Tupaia_belangeri
ENSGAFG00000021464	thoc1	99	66.104	ENSTTRG00000016664	THOC1	98	66.104	Tursiops_truncatus
ENSGAFG00000021464	thoc1	99	72.393	ENSUAMG00000002527	THOC1	98	72.457	Ursus_americanus
ENSGAFG00000021464	thoc1	99	72.393	ENSUMAG00000019693	THOC1	98	72.393	Ursus_maritimus
ENSGAFG00000021464	thoc1	71	65.145	ENSVPAG00000003726	-	66	65.145	Vicugna_pacos
ENSGAFG00000021464	thoc1	99	72.239	ENSVVUG00000004384	THOC1	98	72.239	Vulpes_vulpes
ENSGAFG00000021464	thoc1	99	71.181	ENSXETG00000003155	thoc1	97	70.517	Xenopus_tropicalis
ENSGAFG00000021464	thoc1	98	96.284	ENSXCOG00000016085	thoc1	91	96.284	Xiphophorus_couchianus
ENSGAFG00000021464	thoc1	100	98.471	ENSXMAG00000002353	thoc1	100	98.471	Xiphophorus_maculatus