EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAFG00000021522 (Gene tree)
Gene ID
-
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Minus strand
Length
28362 bases
Position
chrNHOQ01002390.1:6576825-6605186
Accession
7330
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000031984RRM_1PF00076.225e-3412
ENSGAFP00000031984RRM_1PF00076.225e-3422
ENSGAFP00000031983RRM_1PF00076.226.3e-3412
ENSGAFP00000031983RRM_1PF00076.226.3e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000032311MSI1-2011294-ENSGAFP00000031983348 (aa)--
ENSGAFT00000032312MSI1-202969-ENSGAFP00000031984322 (aa)--
Gene Model
Click here to download ENSGAFG00000021522's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000021522's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAFG00000021522MSI15246.746ENSGAFG00000011265-7939.608
ENSGAFG00000021522MSI15246.154ENSGAFG00000008331hnrnpaba8037.643
ENSGAFG00000021522MSI15348.193ENSGAFG00000003714hnrnpd6248.193
ENSGAFG00000021522MSI15135.955ENSGAFG00000010968rbm24a8635.955
ENSGAFG00000021522MSI15538.150ENSGAFG00000016803-6836.481
ENSGAFG00000021522MSI19171.160ENSGAFG00000005860-9071.160
ENSGAFG00000021522MSI15336.047ENSGAFG00000016679-6734.259
ENSGAFG00000021522MSI15038.202ENSGAFG00000006003rbm24b8738.202
ENSGAFG00000021522MSI15642.135ENSGAFG00000007751-6242.614
ENSGAFG00000021522MSI15235.119ENSGAFG00000011052tardbp5535.119
ENSGAFG00000021522MSI18961.661ENSGAFG00000006974msi2a7883.846
ENSGAFG00000021522MSI15742.308ENSGAFG00000004116HNRNPA35842.308
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000021522MSI19485.380ENSG00000135097MSI19885.380Homo_sapiens
ENSGAFG00000021522MSI19491.793ENSAPOG00000023458-9491.793Acanthochromis_polyacanthus
ENSGAFG00000021522MSI19498.165ENSAPOG00000003191MSI19498.165Acanthochromis_polyacanthus
ENSGAFG00000021522MSI19390.995ENSAMEG00000013302MSI18690.995Ailuropoda_melanoleuca
ENSGAFG00000021522MSI19092.667ENSACIG00000017754-7296.059Amphilophus_citrinellus
ENSGAFG00000021522MSI19498.165ENSAOCG00000003804MSI19498.165Amphiprion_ocellaris
ENSGAFG00000021522MSI19585.893ENSAOCG00000009031-9885.893Amphiprion_ocellaris
ENSGAFG00000021522MSI19498.165ENSAPEG00000003245MSI19498.165Amphiprion_percula
ENSGAFG00000021522MSI19491.793ENSAPEG00000006857-7991.793Amphiprion_percula
ENSGAFG00000021522MSI19491.772ENSATEG00000017059MSI19591.483Anabas_testudineus
ENSGAFG00000021522MSI19489.970ENSATEG00000023779-9389.970Anabas_testudineus
ENSGAFG00000021522MSI19485.000ENSACAG00000002762MSI19485.882Anolis_carolinensis
ENSGAFG00000021522MSI18975.261ENSANAG00000027901-8885.338Aotus_nancymaae
ENSGAFG00000021522MSI19485.380ENSANAG00000027151MSI19885.380Aotus_nancymaae
ENSGAFG00000021522MSI19492.378ENSACLG00000000117-10092.355Astatotilapia_calliptera
ENSGAFG00000021522MSI19496.657ENSACLG00000011230MSI19496.657Astatotilapia_calliptera
ENSGAFG00000021522MSI19488.401ENSAMXG00000038960msi17688.401Astyanax_mexicanus
ENSGAFG00000021522MSI19485.380ENSBTAG00000009800MSI110085.337Bos_taurus
ENSGAFG00000021522MSI19485.380ENSCJAG00000008578MSI19885.380Callithrix_jacchus
ENSGAFG00000021522MSI19485.088ENSCAFG00000010283MSI19885.088Canis_familiaris
ENSGAFG00000021522MSI19484.887ENSCAFG00020020585MSI110084.887Canis_lupus_dingo
ENSGAFG00000021522MSI19483.862ENSCHIG00000024304MSI19883.862Capra_hircus
ENSGAFG00000021522MSI19484.709ENSTSYG00000033949MSI19584.709Carlito_syrichta
ENSGAFG00000021522MSI19484.615ENSCAPG00000003919MSI17884.615Cavia_aperea
ENSGAFG00000021522MSI19485.380ENSCPOG00000012361MSI110085.380Cavia_porcellus
ENSGAFG00000021522MSI19485.380ENSCCAG00000035567MSI19885.380Cebus_capucinus
ENSGAFG00000021522MSI19485.380ENSCATG00000030019MSI19885.380Cercocebus_atys
ENSGAFG00000021522MSI19485.380ENSCLAG00000011329MSI110085.380Chinchilla_lanigera
ENSGAFG00000021522MSI17091.518ENSCSAG00000002265MSI18985.214Chlorocebus_sabaeus
ENSGAFG00000021522MSI19587.164ENSCPBG00000011349MSI110087.915Chrysemys_picta_bellii
ENSGAFG00000021522MSI19484.756ENSCANG00000040651MSI110084.756Colobus_angolensis_palliatus
ENSGAFG00000021522MSI19485.380ENSCGRG00001018883Msi19885.380Cricetulus_griseus_chok1gshd
ENSGAFG00000021522MSI19484.802ENSCGRG00000002191Msi17284.802Cricetulus_griseus_crigri
ENSGAFG00000021522MSI19483.129ENSCSEG00000011032MSI110083.129Cynoglossus_semilaevis
ENSGAFG00000021522MSI19491.159ENSCSEG00000008352-9491.159Cynoglossus_semilaevis
ENSGAFG00000021522MSI19496.951ENSCSEG00000005834-9496.951Cynoglossus_semilaevis
ENSGAFG00000021522MSI17680.556ENSCVAG00000017463-8980.556Cyprinodon_variegatus
ENSGAFG00000021522MSI19492.683ENSCVAG00000009100MSI19492.683Cyprinodon_variegatus
ENSGAFG00000021522MSI17989.767ENSDARG00000102015CABZ01037298.19189.767Danio_rerio
ENSGAFG00000021522MSI19484.127ENSDARG00000010710msi110091.589Danio_rerio
ENSGAFG00000021522MSI19481.646ENSDNOG00000005713MSI19181.646Dasypus_novemcinctus
ENSGAFG00000021522MSI19484.132ENSDORG00000005610Msi19484.132Dipodomys_ordii
ENSGAFG00000021522MSI19482.622ENSETEG00000004756MSI110082.317Echinops_telfairi
ENSGAFG00000021522MSI19485.380ENSEASG00005004736MSI19885.380Equus_asinus_asinus
ENSGAFG00000021522MSI19983.008ENSECAG00000017526MSI19885.380Equus_caballus
ENSGAFG00000021522MSI19882.337ENSELUG00000023219MSI19782.337Esox_lucius
ENSGAFG00000021522MSI19486.503ENSELUG00000023280-10086.810Esox_lucius
ENSGAFG00000021522MSI19485.380ENSFCAG00000011007MSI19885.380Felis_catus
ENSGAFG00000021522MSI19488.000ENSFALG00000007574MSI110088.000Ficedula_albicollis
ENSGAFG00000021522MSI19484.451ENSFDAG00000019586MSI110084.451Fukomys_damarensis
ENSGAFG00000021522MSI19498.171ENSFHEG00000003560-9498.171Fundulus_heteroclitus
ENSGAFG00000021522MSI19492.401ENSFHEG00000022446MSI19492.401Fundulus_heteroclitus
ENSGAFG00000021522MSI19491.718ENSGMOG00000001006MSI19491.718Gadus_morhua
ENSGAFG00000021522MSI19484.940ENSGMOG00000017838-9484.940Gadus_morhua
ENSGAFG00000021522MSI19488.168ENSGALG00000007227MSI19675.741Gallus_gallus
ENSGAFG00000021522MSI19490.578ENSGACG00000012679MSI19490.578Gasterosteus_aculeatus
ENSGAFG00000021522MSI19487.977ENSGACG00000008674-9487.977Gasterosteus_aculeatus
ENSGAFG00000021522MSI19487.915ENSGAGG00000016037MSI19487.915Gopherus_agassizii
ENSGAFG00000021522MSI19484.713ENSGGOG00000010328MSI110084.713Gorilla_gorilla
ENSGAFG00000021522MSI19492.378ENSHBUG00000011841-9492.378Haplochromis_burtoni
ENSGAFG00000021522MSI19496.657ENSHBUG00000021921MSI19496.657Haplochromis_burtoni
ENSGAFG00000021522MSI19485.088ENSHGLG00000012782MSI19885.088Heterocephalus_glaber_female
ENSGAFG00000021522MSI19484.451ENSHGLG00100016848MSI110084.451Heterocephalus_glaber_male
ENSGAFG00000021522MSI19491.746ENSHCOG00000012067-8991.746Hippocampus_comes
ENSGAFG00000021522MSI19095.847ENSHCOG00000012019MSI110090.879Hippocampus_comes
ENSGAFG00000021522MSI19489.058ENSIPUG00000001976msi19589.058Ictalurus_punctatus
ENSGAFG00000021522MSI19484.887ENSSTOG00000009799MSI110084.887Ictidomys_tridecemlineatus
ENSGAFG00000021522MSI19475.767ENSJJAG00000010643-9475.767Jaculus_jaculus
ENSGAFG00000021522MSI19485.380ENSJJAG00000010463Msi19885.380Jaculus_jaculus
ENSGAFG00000021522MSI19492.661ENSKMAG00000011251MSI19492.661Kryptolebias_marmoratus
ENSGAFG00000021522MSI19492.945ENSKMAG00000019877-10093.160Kryptolebias_marmoratus
ENSGAFG00000021522MSI19492.401ENSLBEG00000008789MSI19492.401Labrus_bergylta
ENSGAFG00000021522MSI19497.561ENSLBEG00000001375-9497.561Labrus_bergylta
ENSGAFG00000021522MSI19482.558ENSLACG00000018287MSI110082.558Latimeria_chalumnae
ENSGAFG00000021522MSI15075.556ENSLOCG00000008618zgc:1107965875.556Lepisosteus_oculatus
ENSGAFG00000021522MSI19075.831ENSLAFG00000009412MSI110075.831Loxodonta_africana
ENSGAFG00000021522MSI19485.380ENSMFAG00000001798MSI110085.380Macaca_fascicularis
ENSGAFG00000021522MSI19485.380ENSMMUG00000031527MSI19785.131Macaca_mulatta
ENSGAFG00000021522MSI19485.380ENSMNEG00000040034MSI19885.380Macaca_nemestrina
ENSGAFG00000021522MSI19484.756ENSMLEG00000003921MSI110084.756Mandrillus_leucophaeus
ENSGAFG00000021522MSI19492.049ENSMAMG00000002279MSI19492.049Mastacembelus_armatus
ENSGAFG00000021522MSI19498.160ENSMAMG00000018426-9498.160Mastacembelus_armatus
ENSGAFG00000021522MSI19496.657ENSMZEG00005026892MSI19496.657Maylandia_zebra
ENSGAFG00000021522MSI19492.378ENSMZEG00005000340-9492.378Maylandia_zebra
ENSGAFG00000021522MSI16892.308ENSMGAG00000016518-10092.308Meleagris_gallopavo
ENSGAFG00000021522MSI17091.518ENSMAUG00000016820Msi19988.843Mesocricetus_auratus
ENSGAFG00000021522MSI19485.380ENSMICG00000033181MSI19885.380Microcebus_murinus
ENSGAFG00000021522MSI19485.088ENSMOCG00000002286Msi19885.088Microtus_ochrogaster
ENSGAFG00000021522MSI19686.859ENSMMOG00000010492MSI19786.859Mola_mola
ENSGAFG00000021522MSI19489.752ENSMMOG00000012265-9989.769Mola_mola
ENSGAFG00000021522MSI19059.337ENSMODG00000003189-10059.639Monodelphis_domestica
ENSGAFG00000021522MSI19492.378ENSMALG00000017889MSI19492.378Monopterus_albus
ENSGAFG00000021522MSI19497.538ENSMALG00000001426-10097.538Monopterus_albus
ENSGAFG00000021522MSI19484.795MGP_CAROLIEiJ_G0027626Msi19884.795Mus_caroli
ENSGAFG00000021522MSI19487.346ENSMUSG00000054256Msi19987.346Mus_musculus
ENSGAFG00000021522MSI19487.879MGP_PahariEiJ_G0024206Msi19887.879Mus_pahari
ENSGAFG00000021522MSI19484.795MGP_SPRETEiJ_G0028624Msi19884.795Mus_spretus
ENSGAFG00000021522MSI19484.887ENSMPUG00000003168MSI110084.887Mustela_putorius_furo
ENSGAFG00000021522MSI19475.893ENSMLUG00000010313MSI110075.893Myotis_lucifugus
ENSGAFG00000021522MSI19484.802ENSNGAG00000014508Msi19184.802Nannospalax_galili
ENSGAFG00000021522MSI19487.705ENSNBRG00000018012MSI19987.705Neolamprologus_brichardi
ENSGAFG00000021522MSI19492.378ENSNBRG00000000841-9492.378Neolamprologus_brichardi
ENSGAFG00000021522MSI19075.000ENSNLEG00000015636MSI110075.000Nomascus_leucogenys
ENSGAFG00000021522MSI19465.549ENSMEUG00000015759MSI110065.549Notamacropus_eugenii
ENSGAFG00000021522MSI19077.143ENSOPRG00000016879MSI110077.143Ochotona_princeps
ENSGAFG00000021522MSI19484.756ENSODEG00000006328MSI110084.756Octodon_degus
ENSGAFG00000021522MSI19493.275ENSONIG00000019452-9493.275Oreochromis_niloticus
ENSGAFG00000021522MSI19394.667ENSONIG00000011182MSI19492.378Oreochromis_niloticus
ENSGAFG00000021522MSI19485.209ENSOCUG00000027716MSI110085.209Oryctolagus_cuniculus
ENSGAFG00000021522MSI19492.097ENSORLG00000019978-9492.097Oryzias_latipes
ENSGAFG00000021522MSI19498.165ENSORLG00000029593MSI19498.165Oryzias_latipes
ENSGAFG00000021522MSI19498.165ENSORLG00020008266MSI110092.429Oryzias_latipes_hni
ENSGAFG00000021522MSI19492.097ENSORLG00020001208-6792.097Oryzias_latipes_hni
ENSGAFG00000021522MSI19498.165ENSORLG00015003916MSI110092.429Oryzias_latipes_hsok
ENSGAFG00000021522MSI19492.097ENSORLG00015013672-6792.097Oryzias_latipes_hsok
ENSGAFG00000021522MSI19497.859ENSOMEG00000002272-9797.859Oryzias_melastigma
ENSGAFG00000021522MSI19492.097ENSOMEG00000017536MSI110087.500Oryzias_melastigma
ENSGAFG00000021522MSI19484.638ENSOGAG00000003847MSI19884.638Otolemur_garnettii
ENSGAFG00000021522MSI19482.424ENSOARG00000012097MSI110082.424Ovis_aries
ENSGAFG00000021522MSI19484.756ENSPPAG00000043073MSI110084.756Pan_paniscus
ENSGAFG00000021522MSI19485.380ENSPPRG00000000370MSI19885.380Panthera_pardus
ENSGAFG00000021522MSI19484.887ENSPTIG00000008913MSI110084.887Panthera_tigris_altaica
ENSGAFG00000021522MSI19485.380ENSPTRG00000005531MSI19885.380Pan_troglodytes
ENSGAFG00000021522MSI19485.088ENSPANG00000006335MSI19885.088Papio_anubis
ENSGAFG00000021522MSI19490.854ENSPKIG00000023575-9490.854Paramormyrops_kingsleyae
ENSGAFG00000021522MSI19493.902ENSPKIG00000016497MSI19493.902Paramormyrops_kingsleyae
ENSGAFG00000021522MSI17980.263ENSPSIG00000009621-10080.702Pelodiscus_sinensis
ENSGAFG00000021522MSI19685.075ENSPSIG00000011608-9585.075Pelodiscus_sinensis
ENSGAFG00000021522MSI15284.615ENSPSIG00000016295-9584.615Pelodiscus_sinensis
ENSGAFG00000021522MSI19576.347ENSPMGG00000007743-9274.636Periophthalmus_magnuspinnatus
ENSGAFG00000021522MSI19086.349ENSPMGG00000000514MSI19786.349Periophthalmus_magnuspinnatus
ENSGAFG00000021522MSI19483.383ENSPEMG00000010491Msi19583.383Peromyscus_maniculatus_bairdii
ENSGAFG00000021522MSI19498.780ENSPFOG00000008319-8198.780Poecilia_formosa
ENSGAFG00000021522MSI19492.097ENSPFOG00000013113MSI19492.097Poecilia_formosa
ENSGAFG00000021522MSI19498.780ENSPLAG00000012431-10090.379Poecilia_latipinna
ENSGAFG00000021522MSI19492.097ENSPLAG00000014025-9492.097Poecilia_latipinna
ENSGAFG00000021522MSI19499.387ENSPMEG00000007025-10093.134Poecilia_mexicana
ENSGAFG00000021522MSI19492.097ENSPMEG00000012796MSI19492.097Poecilia_mexicana
ENSGAFG00000021522MSI17678.733ENSPREG00000014574-10078.733Poecilia_reticulata
ENSGAFG00000021522MSI19492.698ENSPREG00000021416-9490.214Poecilia_reticulata
ENSGAFG00000021522MSI19484.503ENSPPYG00000005027MSI19884.503Pongo_abelii
ENSGAFG00000021522MSI17687.817ENSPCAG00000002300MSI17287.817Procavia_capensis
ENSGAFG00000021522MSI19485.380ENSPCOG00000017341MSI19885.380Propithecus_coquereli
ENSGAFG00000021522MSI18589.062ENSPVAG00000002225MSI110068.902Pteropus_vampyrus
ENSGAFG00000021522MSI19492.378ENSPNYG00000002529-9492.378Pundamilia_nyererei
ENSGAFG00000021522MSI19496.657ENSPNYG00000004379MSI19496.657Pundamilia_nyererei
ENSGAFG00000021522MSI19489.362ENSPNAG00000019337msi19489.362Pygocentrus_nattereri
ENSGAFG00000021522MSI19484.566ENSRNOG00000001156Msi110084.566Rattus_norvegicus
ENSGAFG00000021522MSI19484.887ENSRBIG00000036889MSI110084.887Rhinopithecus_bieti
ENSGAFG00000021522MSI19484.545ENSRROG00000041076MSI19384.545Rhinopithecus_roxellana
ENSGAFG00000021522MSI19585.217ENSSBOG00000030259MSI19985.217Saimiri_boliviensis_boliviensis
ENSGAFG00000021522MSI19474.183ENSSHAG00000006834MSI110074.183Sarcophilus_harrisii
ENSGAFG00000021522MSI19491.867ENSSFOG00015005350MSI19691.867Scleropages_formosus
ENSGAFG00000021522MSI19494.817ENSSFOG00015014964-9892.899Scleropages_formosus
ENSGAFG00000021522MSI19485.266ENSSMAG00000018824MSI19885.266Scophthalmus_maximus
ENSGAFG00000021522MSI19497.318ENSSMAG00000009156-7397.030Scophthalmus_maximus
ENSGAFG00000021522MSI19492.097ENSSDUG00000001027MSI19492.097Seriola_dumerili
ENSGAFG00000021522MSI19497.866ENSSDUG00000022697-9497.866Seriola_dumerili
ENSGAFG00000021522MSI19486.053ENSSLDG00000018706-9986.164Seriola_lalandi_dorsalis
ENSGAFG00000021522MSI19492.097ENSSLDG00000016832MSI19492.097Seriola_lalandi_dorsalis
ENSGAFG00000021522MSI19487.915ENSSPUG00000015741MSI110087.915Sphenodon_punctatus
ENSGAFG00000021522MSI19497.866ENSSPAG00000013098-10097.866Stegastes_partitus
ENSGAFG00000021522MSI17485.165ENSSPAG00000014085-10085.165Stegastes_partitus
ENSGAFG00000021522MSI19485.088ENSSSCG00000029365MSI110084.566Sus_scrofa
ENSGAFG00000021522MSI19485.882ENSTGUG00000009534MSI110085.882Taeniopygia_guttata
ENSGAFG00000021522MSI18188.940ENSTRUG00000016249MSI110080.632Takifugu_rubripes
ENSGAFG00000021522MSI19393.728ENSTRUG00000015636-7993.728Takifugu_rubripes
ENSGAFG00000021522MSI19488.146ENSTNIG00000011469MSI19488.146Tetraodon_nigroviridis
ENSGAFG00000021522MSI19465.060ENSTNIG00000019814-9465.798Tetraodon_nigroviridis
ENSGAFG00000021522MSI19476.557ENSTBEG00000007182MSI110075.089Tupaia_belangeri
ENSGAFG00000021522MSI17687.594ENSTTRG00000005663MSI17887.594Tursiops_truncatus
ENSGAFG00000021522MSI17091.710ENSUAMG00000015514MSI19487.500Ursus_americanus
ENSGAFG00000021522MSI19481.759ENSUMAG00000006176MSI18881.759Ursus_maritimus
ENSGAFG00000021522MSI19484.802ENSVVUG00000020993MSI110084.084Vulpes_vulpes
ENSGAFG00000021522MSI19485.933ENSXETG00000012216msi19485.933Xenopus_tropicalis
ENSGAFG00000021522MSI19982.609ENSXCOG00000017605MSI19582.609Xiphophorus_couchianus
ENSGAFG00000021522MSI19499.693ENSXMAG00000018237-9499.693Xiphophorus_maculatus
ENSGAFG00000021522MSI19492.683ENSXMAG00000027103MSI19083.072Xiphophorus_maculatus

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