EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000021559 (Gene tree)
Gene ID: -
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 3701 bases
Position: chrNHOQ01002390.1:7267922-7271622
Accession: ZDB-GENE-040801-238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000032033	PseudoU_synth_2	PF00849.22	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000032364	-	1373	-	ENSGAFP00000032033	390 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000021559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000021559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000021559	rpusd4	84	48.193	ENSG00000165526	RPUSD4	90	47.578	Homo_sapiens
ENSGAFG00000021559	rpusd4	100	69.367	ENSAPOG00000011024	rpusd4	98	69.367	Acanthochromis_polyacanthus
ENSGAFG00000021559	rpusd4	57	53.922	ENSAMEG00000005953	-	96	53.922	Ailuropoda_melanoleuca
ENSGAFG00000021559	rpusd4	88	47.414	ENSAMEG00000000127	-	90	47.414	Ailuropoda_melanoleuca
ENSGAFG00000021559	rpusd4	85	73.030	ENSACIG00000003533	rpusd4	95	73.252	Amphilophus_citrinellus
ENSGAFG00000021559	rpusd4	99	69.289	ENSAOCG00000015409	rpusd4	97	69.289	Amphiprion_ocellaris
ENSGAFG00000021559	rpusd4	99	69.289	ENSAPEG00000018935	rpusd4	97	69.289	Amphiprion_percula
ENSGAFG00000021559	rpusd4	100	68.101	ENSATEG00000008059	rpusd4	97	68.101	Anabas_testudineus
ENSGAFG00000021559	rpusd4	72	51.064	ENSAPLG00000013250	RPUSD4	98	50.694	Anas_platyrhynchos
ENSGAFG00000021559	rpusd4	88	47.429	ENSACAG00000000189	RPUSD4	93	47.429	Anolis_carolinensis
ENSGAFG00000021559	rpusd4	87	47.126	ENSANAG00000024050	RPUSD4	91	47.126	Aotus_nancymaae
ENSGAFG00000021559	rpusd4	99	70.408	ENSACLG00000020996	rpusd4	99	70.408	Astatotilapia_calliptera
ENSGAFG00000021559	rpusd4	86	57.988	ENSAMXG00000031479	rpusd4	95	57.988	Astyanax_mexicanus
ENSGAFG00000021559	rpusd4	88	47.536	ENSBTAG00000020900	RPUSD4	89	47.536	Bos_taurus
ENSGAFG00000021559	rpusd4	88	46.571	ENSCJAG00000042850	RPUSD4	86	46.571	Callithrix_jacchus
ENSGAFG00000021559	rpusd4	88	48.276	ENSCAFG00000010488	RPUSD4	90	48.851	Canis_familiaris
ENSGAFG00000021559	rpusd4	88	48.276	ENSCAFG00020010621	RPUSD4	90	48.851	Canis_lupus_dingo
ENSGAFG00000021559	rpusd4	81	48.113	ENSCHIG00000009975	RPUSD4	89	46.957	Capra_hircus
ENSGAFG00000021559	rpusd4	88	48.571	ENSTSYG00000008456	RPUSD4	90	48.571	Carlito_syrichta
ENSGAFG00000021559	rpusd4	62	46.939	ENSCAPG00000006040	RPUSD4	93	46.939	Cavia_aperea
ENSGAFG00000021559	rpusd4	91	47.632	ENSCPOG00000014971	RPUSD4	92	47.632	Cavia_porcellus
ENSGAFG00000021559	rpusd4	88	46.286	ENSCCAG00000027838	RPUSD4	92	46.286	Cebus_capucinus
ENSGAFG00000021559	rpusd4	88	45.821	ENSCATG00000041570	RPUSD4	90	45.821	Cercocebus_atys
ENSGAFG00000021559	rpusd4	87	49.271	ENSCLAG00000016553	RPUSD4	88	49.271	Chinchilla_lanigera
ENSGAFG00000021559	rpusd4	88	45.821	ENSCSAG00000002274	RPUSD4	90	45.821	Chlorocebus_sabaeus
ENSGAFG00000021559	rpusd4	69	49.265	ENSCHOG00000010249	RPUSD4	94	49.265	Choloepus_hoffmanni
ENSGAFG00000021559	rpusd4	73	52.595	ENSCPBG00000011175	RPUSD4	99	52.595	Chrysemys_picta_bellii
ENSGAFG00000021559	rpusd4	69	36.918	ENSCSAVG00000000872	-	54	36.918	Ciona_savignyi
ENSGAFG00000021559	rpusd4	88	46.571	ENSCANG00000039684	RPUSD4	90	46.571	Colobus_angolensis_palliatus
ENSGAFG00000021559	rpusd4	87	48.256	ENSCGRG00001024141	Rpusd4	89	48.256	Cricetulus_griseus_chok1gshd
ENSGAFG00000021559	rpusd4	87	48.256	ENSCGRG00000014415	Rpusd4	89	48.256	Cricetulus_griseus_crigri
ENSGAFG00000021559	rpusd4	100	77.099	ENSCVAG00000008761	rpusd4	99	77.099	Cyprinodon_variegatus
ENSGAFG00000021559	rpusd4	100	77.099	ENSCVAG00000000392	rpusd4	98	79.429	Cyprinodon_variegatus
ENSGAFG00000021559	rpusd4	84	58.232	ENSDARG00000012674	rpusd4	90	58.232	Danio_rerio
ENSGAFG00000021559	rpusd4	87	47.093	ENSDNOG00000020026	RPUSD4	89	47.093	Dasypus_novemcinctus
ENSGAFG00000021559	rpusd4	87	46.377	ENSDORG00000016717	Rpusd4	89	46.957	Dipodomys_ordii
ENSGAFG00000021559	rpusd4	87	48.406	ENSETEG00000013953	RPUSD4	89	48.406	Echinops_telfairi
ENSGAFG00000021559	rpusd4	89	46.591	ENSEASG00005022982	RPUSD4	91	46.591	Equus_asinus_asinus
ENSGAFG00000021559	rpusd4	89	46.875	ENSECAG00000000557	RPUSD4	91	46.875	Equus_caballus
ENSGAFG00000021559	rpusd4	66	53.591	ENSEEUG00000014036	RPUSD4	68	53.591	Erinaceus_europaeus
ENSGAFG00000021559	rpusd4	94	57.373	ENSELUG00000008075	rpusd4	97	57.373	Esox_lucius
ENSGAFG00000021559	rpusd4	88	46.857	ENSFCAG00000029789	RPUSD4	90	47.143	Felis_catus
ENSGAFG00000021559	rpusd4	84	47.576	ENSFALG00000005171	RPUSD4	96	47.576	Ficedula_albicollis
ENSGAFG00000021559	rpusd4	92	46.594	ENSFDAG00000014307	RPUSD4	96	46.594	Fukomys_damarensis
ENSGAFG00000021559	rpusd4	100	79.231	ENSFHEG00000004329	rpusd4	100	79.231	Fundulus_heteroclitus
ENSGAFG00000021559	rpusd4	84	64.329	ENSGMOG00000017726	rpusd4	99	63.636	Gadus_morhua
ENSGAFG00000021559	rpusd4	72	52.982	ENSGALG00000024326	RPUSD4	94	48.225	Gallus_gallus
ENSGAFG00000021559	rpusd4	88	70.175	ENSGACG00000001657	rpusd4	97	75.090	Gasterosteus_aculeatus
ENSGAFG00000021559	rpusd4	91	49.020	ENSGAGG00000000132	RPUSD4	96	49.020	Gopherus_agassizii
ENSGAFG00000021559	rpusd4	84	48.494	ENSGGOG00000016494	RPUSD4	90	47.414	Gorilla_gorilla
ENSGAFG00000021559	rpusd4	99	70.408	ENSHBUG00000022838	rpusd4	99	70.408	Haplochromis_burtoni
ENSGAFG00000021559	rpusd4	93	46.429	ENSHGLG00000002285	RPUSD4	94	46.429	Heterocephalus_glaber_female
ENSGAFG00000021559	rpusd4	93	46.429	ENSHGLG00100006385	RPUSD4	94	46.429	Heterocephalus_glaber_male
ENSGAFG00000021559	rpusd4	99	64.541	ENSHCOG00000006612	rpusd4	99	64.541	Hippocampus_comes
ENSGAFG00000021559	rpusd4	86	56.932	ENSIPUG00000023879	rusd4	86	56.932	Ictalurus_punctatus
ENSGAFG00000021559	rpusd4	81	50.000	ENSSTOG00000025280	RPUSD4	87	50.000	Ictidomys_tridecemlineatus
ENSGAFG00000021559	rpusd4	88	47.025	ENSJJAG00000018673	Rpusd4	94	47.025	Jaculus_jaculus
ENSGAFG00000021559	rpusd4	99	67.424	ENSKMAG00000021805	rpusd4	100	67.424	Kryptolebias_marmoratus
ENSGAFG00000021559	rpusd4	96	67.347	ENSLBEG00000020394	rpusd4	94	74.260	Labrus_bergylta
ENSGAFG00000021559	rpusd4	84	49.849	ENSLACG00000011028	RPUSD4	84	49.558	Latimeria_chalumnae
ENSGAFG00000021559	rpusd4	95	42.448	ENSLOCG00000003124	rpusd4	100	42.448	Lepisosteus_oculatus
ENSGAFG00000021559	rpusd4	87	48.991	ENSLAFG00000005211	RPUSD4	100	42.712	Loxodonta_africana
ENSGAFG00000021559	rpusd4	88	46.110	ENSMFAG00000039513	RPUSD4	90	46.110	Macaca_fascicularis
ENSGAFG00000021559	rpusd4	88	45.821	ENSMMUG00000007933	RPUSD4	90	45.821	Macaca_mulatta
ENSGAFG00000021559	rpusd4	88	46.398	ENSMNEG00000027414	RPUSD4	90	46.398	Macaca_nemestrina
ENSGAFG00000021559	rpusd4	88	46.552	ENSMLEG00000042461	RPUSD4	90	46.552	Mandrillus_leucophaeus
ENSGAFG00000021559	rpusd4	100	68.974	ENSMAMG00000023839	rpusd4	100	68.974	Mastacembelus_armatus
ENSGAFG00000021559	rpusd4	99	70.229	ENSMZEG00005011999	rpusd4	99	70.229	Maylandia_zebra
ENSGAFG00000021559	rpusd4	72	51.579	ENSMGAG00000000840	RPUSD4	99	47.112	Meleagris_gallopavo
ENSGAFG00000021559	rpusd4	91	46.944	ENSMAUG00000010280	Rpusd4	93	46.944	Mesocricetus_auratus
ENSGAFG00000021559	rpusd4	85	48.083	ENSMICG00000015979	RPUSD4	90	50.987	Microcebus_murinus
ENSGAFG00000021559	rpusd4	86	47.198	ENSMOCG00000000661	Rpusd4	87	47.198	Microtus_ochrogaster
ENSGAFG00000021559	rpusd4	82	71.340	ENSMMOG00000021731	rpusd4	95	71.340	Mola_mola
ENSGAFG00000021559	rpusd4	82	50.926	ENSMODG00000004521	RPUSD4	81	50.926	Monodelphis_domestica
ENSGAFG00000021559	rpusd4	79	73.052	ENSMALG00000005839	rpusd4	98	70.807	Monopterus_albus
ENSGAFG00000021559	rpusd4	86	48.673	MGP_CAROLIEiJ_G0031954	Rpusd4	87	48.673	Mus_caroli
ENSGAFG00000021559	rpusd4	86	49.263	ENSMUSG00000032044	Rpusd4	87	49.263	Mus_musculus
ENSGAFG00000021559	rpusd4	86	48.673	MGP_PahariEiJ_G0014819	Rpusd4	87	48.673	Mus_pahari
ENSGAFG00000021559	rpusd4	93	46.883	MGP_SPRETEiJ_G0033078	Rpusd4	95	46.883	Mus_spretus
ENSGAFG00000021559	rpusd4	88	47.701	ENSMPUG00000006608	RPUSD4	90	47.701	Mustela_putorius_furo
ENSGAFG00000021559	rpusd4	65	48.828	ENSMLUG00000029348	-	99	48.828	Myotis_lucifugus
ENSGAFG00000021559	rpusd4	83	48.624	ENSMLUG00000017328	-	85	48.624	Myotis_lucifugus
ENSGAFG00000021559	rpusd4	87	48.991	ENSNGAG00000020847	Rpusd4	89	48.991	Nannospalax_galili
ENSGAFG00000021559	rpusd4	89	72.493	ENSNBRG00000005207	rpusd4	96	72.493	Neolamprologus_brichardi
ENSGAFG00000021559	rpusd4	88	46.686	ENSNLEG00000007465	RPUSD4	90	46.686	Nomascus_leucogenys
ENSGAFG00000021559	rpusd4	95	46.933	ENSMEUG00000004370	RPUSD4	95	46.933	Notamacropus_eugenii
ENSGAFG00000021559	rpusd4	87	47.522	ENSODEG00000004577	RPUSD4	88	47.522	Octodon_degus
ENSGAFG00000021559	rpusd4	99	70.918	ENSONIG00000018879	rpusd4	99	70.918	Oreochromis_niloticus
ENSGAFG00000021559	rpusd4	75	47.651	ENSOANG00000007247	RPUSD4	95	47.508	Ornithorhynchus_anatinus
ENSGAFG00000021559	rpusd4	98	46.134	ENSOCUG00000017039	RPUSD4	98	46.015	Oryctolagus_cuniculus
ENSGAFG00000021559	rpusd4	91	66.387	ENSORLG00000002750	rpusd4	93	67.919	Oryzias_latipes
ENSGAFG00000021559	rpusd4	94	66.120	ENSORLG00020002044	rpusd4	90	66.120	Oryzias_latipes_hni
ENSGAFG00000021559	rpusd4	93	65.479	ENSORLG00015020034	rpusd4	90	65.479	Oryzias_latipes_hsok
ENSGAFG00000021559	rpusd4	93	68.320	ENSOMEG00000004861	rpusd4	88	68.320	Oryzias_melastigma
ENSGAFG00000021559	rpusd4	84	49.394	ENSOGAG00000008922	RPUSD4	89	48.555	Otolemur_garnettii
ENSGAFG00000021559	rpusd4	81	48.113	ENSOARG00000012238	RPUSD4	88	46.957	Ovis_aries
ENSGAFG00000021559	rpusd4	84	48.193	ENSPPAG00000042883	RPUSD4	84	47.126	Pan_paniscus
ENSGAFG00000021559	rpusd4	88	47.143	ENSPPRG00000003081	RPUSD4	90	47.143	Panthera_pardus
ENSGAFG00000021559	rpusd4	88	47.143	ENSPTIG00000012059	RPUSD4	88	49.196	Panthera_tigris_altaica
ENSGAFG00000021559	rpusd4	84	48.193	ENSPTRG00000004454	RPUSD4	97	46.174	Pan_troglodytes
ENSGAFG00000021559	rpusd4	88	46.110	ENSPANG00000015040	RPUSD4	90	46.110	Papio_anubis
ENSGAFG00000021559	rpusd4	88	55.908	ENSPKIG00000023986	rpusd4	87	55.908	Paramormyrops_kingsleyae
ENSGAFG00000021559	rpusd4	75	52.189	ENSPSIG00000014268	RPUSD4	93	52.189	Pelodiscus_sinensis
ENSGAFG00000021559	rpusd4	96	61.257	ENSPMGG00000002806	rpusd4	99	61.257	Periophthalmus_magnuspinnatus
ENSGAFG00000021559	rpusd4	86	43.195	ENSPEMG00000000278	Rpusd4	86	43.195	Peromyscus_maniculatus_bairdii
ENSGAFG00000021559	rpusd4	79	39.941	ENSPMAG00000008183	rpusd4	97	39.941	Petromyzon_marinus
ENSGAFG00000021559	rpusd4	86	49.558	ENSPCIG00000010212	RPUSD4	91	49.558	Phascolarctos_cinereus
ENSGAFG00000021559	rpusd4	97	92.632	ENSPFOG00000019030	rpusd4	100	92.632	Poecilia_formosa
ENSGAFG00000021559	rpusd4	100	93.606	ENSPLAG00000016848	rpusd4	100	93.606	Poecilia_latipinna
ENSGAFG00000021559	rpusd4	100	92.583	ENSPMEG00000017534	rpusd4	100	92.583	Poecilia_mexicana
ENSGAFG00000021559	rpusd4	97	90.789	ENSPREG00000005689	rpusd4	98	90.789	Poecilia_reticulata
ENSGAFG00000021559	rpusd4	88	46.110	ENSPPYG00000004043	RPUSD4	90	46.857	Pongo_abelii
ENSGAFG00000021559	rpusd4	69	51.913	ENSPCAG00000000753	RPUSD4	71	51.913	Procavia_capensis
ENSGAFG00000021559	rpusd4	87	46.532	ENSPCOG00000020694	RPUSD4	90	46.532	Propithecus_coquereli
ENSGAFG00000021559	rpusd4	87	47.093	ENSPVAG00000000988	RPUSD4	90	46.974	Pteropus_vampyrus
ENSGAFG00000021559	rpusd4	97	72.414	ENSPNYG00000009652	rpusd4	96	72.414	Pundamilia_nyererei
ENSGAFG00000021559	rpusd4	87	57.895	ENSPNAG00000012264	rpusd4	89	57.895	Pygocentrus_nattereri
ENSGAFG00000021559	rpusd4	86	49.112	ENSRNOG00000011567	Rpusd4	87	49.112	Rattus_norvegicus
ENSGAFG00000021559	rpusd4	87	46.334	ENSRBIG00000034842	RPUSD4	90	45.821	Rhinopithecus_bieti
ENSGAFG00000021559	rpusd4	87	46.334	ENSRROG00000039753	RPUSD4	90	45.821	Rhinopithecus_roxellana
ENSGAFG00000021559	rpusd4	87	45.797	ENSSBOG00000030413	RPUSD4	90	45.797	Saimiri_boliviensis_boliviensis
ENSGAFG00000021559	rpusd4	76	51.007	ENSSHAG00000008304	RPUSD4	97	51.007	Sarcophilus_harrisii
ENSGAFG00000021559	rpusd4	86	55.325	ENSSFOG00015006203	rpusd4	91	55.325	Scleropages_formosus
ENSGAFG00000021559	rpusd4	100	65.316	ENSSMAG00000020978	rpusd4	100	65.316	Scophthalmus_maximus
ENSGAFG00000021559	rpusd4	99	67.347	ENSSDUG00000013399	rpusd4	100	67.347	Seriola_dumerili
ENSGAFG00000021559	rpusd4	99	67.347	ENSSLDG00000023507	rpusd4	100	67.347	Seriola_lalandi_dorsalis
ENSGAFG00000021559	rpusd4	75	53.872	ENSSPUG00000001401	RPUSD4	90	51.212	Sphenodon_punctatus
ENSGAFG00000021559	rpusd4	100	68.182	ENSSPAG00000012163	rpusd4	100	68.182	Stegastes_partitus
ENSGAFG00000021559	rpusd4	82	47.692	ENSSSCG00000015233	RPUSD4	85	47.692	Sus_scrofa
ENSGAFG00000021559	rpusd4	77	50.333	ENSTGUG00000000773	RPUSD4	99	50.333	Taeniopygia_guttata
ENSGAFG00000021559	rpusd4	95	66.667	ENSTRUG00000012283	rpusd4	93	66.667	Takifugu_rubripes
ENSGAFG00000021559	rpusd4	91	69.209	ENSTNIG00000014676	rpusd4	89	69.209	Tetraodon_nigroviridis
ENSGAFG00000021559	rpusd4	87	47.550	ENSTTRG00000001555	RPUSD4	89	47.550	Tursiops_truncatus
ENSGAFG00000021559	rpusd4	88	47.989	ENSUMAG00000002219	RPUSD4	90	47.989	Ursus_maritimus
ENSGAFG00000021559	rpusd4	62	45.041	ENSVPAG00000001066	RPUSD4	88	45.041	Vicugna_pacos
ENSGAFG00000021559	rpusd4	88	48.276	ENSVVUG00000020101	RPUSD4	90	48.851	Vulpes_vulpes
ENSGAFG00000021559	rpusd4	100	94.615	ENSXCOG00000004676	rpusd4	100	94.615	Xiphophorus_couchianus
ENSGAFG00000021559	rpusd4	100	94.615	ENSXMAG00000023351	rpusd4	100	94.615	Xiphophorus_maculatus