EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000021611 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 3720 bases
Position: chrNHOQ01002390.1:7856042-7859761
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000032108	RRM_1	PF00076.22	1e-29	1	2
ENSGAFP00000032108	RRM_1	PF00076.22	1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000032439	-	2550	-	ENSGAFP00000032108	849 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000021611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000021611's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000021611	-	96	59.976	ENSGAFG00000001534	rbm15	98	60.094

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000021611	-	98	52.088	ENSG00000162775	RBM15	98	54.585	Homo_sapiens
ENSGAFG00000021611	-	92	73.659	ENSAPOG00000017590	-	100	73.659	Acanthochromis_polyacanthus
ENSGAFG00000021611	-	96	60.581	ENSAPOG00000018748	rbm15	100	60.814	Acanthochromis_polyacanthus
ENSGAFG00000021611	-	98	51.829	ENSAMEG00000011540	RBM15	97	53.710	Ailuropoda_melanoleuca
ENSGAFG00000021611	-	96	59.793	ENSACIG00000004343	rbm15	100	59.884	Amphilophus_citrinellus
ENSGAFG00000021611	-	96	71.678	ENSACIG00000019811	-	100	71.963	Amphilophus_citrinellus
ENSGAFG00000021611	-	96	73.944	ENSAOCG00000021969	-	100	74.413	Amphiprion_ocellaris
ENSGAFG00000021611	-	96	60.698	ENSAOCG00000016849	rbm15	100	60.930	Amphiprion_ocellaris
ENSGAFG00000021611	-	95	73.412	ENSAPEG00000015151	-	98	74.471	Amphiprion_percula
ENSGAFG00000021611	-	96	60.581	ENSAPEG00000020077	rbm15	100	60.814	Amphiprion_percula
ENSGAFG00000021611	-	96	60.793	ENSATEG00000019337	rbm15	100	61.144	Anabas_testudineus
ENSGAFG00000021611	-	96	72.907	ENSATEG00000005926	-	100	73.256	Anabas_testudineus
ENSGAFG00000021611	-	98	52.197	ENSANAG00000020673	RBM15	96	54.154	Aotus_nancymaae
ENSGAFG00000021611	-	96	60.046	ENSACLG00000001673	rbm15	100	60.277	Astatotilapia_calliptera
ENSGAFG00000021611	-	95	71.747	ENSACLG00000022961	-	97	71.864	Astatotilapia_calliptera
ENSGAFG00000021611	-	96	62.128	ENSAMXG00000026103	rbm15	100	62.929	Astyanax_mexicanus
ENSGAFG00000021611	-	98	52.456	ENSBTAG00000012555	RBM15	97	53.870	Bos_taurus
ENSGAFG00000021611	-	98	52.401	ENSCJAG00000003411	RBM15	97	53.814	Callithrix_jacchus
ENSGAFG00000021611	-	98	52.521	ENSCAFG00000019789	RBM15	95	54.198	Canis_familiaris
ENSGAFG00000021611	-	98	52.351	ENSCAFG00020009671	RBM15	95	54.198	Canis_lupus_dingo
ENSGAFG00000021611	-	98	52.038	ENSCHIG00000026774	RBM15	97	53.766	Capra_hircus
ENSGAFG00000021611	-	98	52.560	ENSTSYG00000000106	RBM15	97	54.088	Carlito_syrichta
ENSGAFG00000021611	-	67	54.250	ENSCAPG00000013057	RBM15	98	54.173	Cavia_aperea
ENSGAFG00000021611	-	98	50.995	ENSCPOG00000007520	RBM15	97	53.207	Cavia_porcellus
ENSGAFG00000021611	-	99	51.390	ENSCCAG00000036780	RBM15	98	53.313	Cebus_capucinus
ENSGAFG00000021611	-	98	51.667	ENSCATG00000015743	RBM15	97	53.508	Cercocebus_atys
ENSGAFG00000021611	-	98	51.883	ENSCLAG00000008406	RBM15	97	54.202	Chinchilla_lanigera
ENSGAFG00000021611	-	98	51.728	ENSCSAG00000001563	RBM15	96	53.403	Chlorocebus_sabaeus
ENSGAFG00000021611	-	82	52.644	ENSCPBG00000001662	RBM15	100	51.749	Chrysemys_picta_bellii
ENSGAFG00000021611	-	98	51.458	ENSCANG00000038717	RBM15	96	53.298	Colobus_angolensis_palliatus
ENSGAFG00000021611	-	95	52.151	ENSCGRG00001001004	Rbm15	95	54.004	Cricetulus_griseus_chok1gshd
ENSGAFG00000021611	-	95	52.151	ENSCGRG00000010592	Rbm15	95	54.004	Cricetulus_griseus_crigri
ENSGAFG00000021611	-	96	63.889	ENSCSEG00000002314	-	100	63.426	Cynoglossus_semilaevis
ENSGAFG00000021611	-	96	61.601	ENSCSEG00000004062	rbm15	100	61.949	Cynoglossus_semilaevis
ENSGAFG00000021611	-	96	80.664	ENSCVAG00000004005	-	100	80.664	Cyprinodon_variegatus
ENSGAFG00000021611	-	96	59.229	ENSCVAG00000013185	rbm15	100	59.463	Cyprinodon_variegatus
ENSGAFG00000021611	-	96	62.341	ENSDARG00000073847	rbm15	100	62.572	Danio_rerio
ENSGAFG00000021611	-	66	53.943	ENSDNOG00000032007	RBM15	86	57.211	Dasypus_novemcinctus
ENSGAFG00000021611	-	83	56.538	ENSDORG00000005669	Rbm15	100	54.350	Dipodomys_ordii
ENSGAFG00000021611	-	98	51.667	ENSEASG00005005359	RBM15	97	53.305	Equus_asinus_asinus
ENSGAFG00000021611	-	98	51.667	ENSECAG00000023660	RBM15	97	53.305	Equus_caballus
ENSGAFG00000021611	-	96	64.361	ENSELUG00000014614	RBM15	100	64.478	Esox_lucius
ENSGAFG00000021611	-	95	59.091	ENSELUG00000016087	rbm15	97	59.659	Esox_lucius
ENSGAFG00000021611	-	98	52.088	ENSFCAG00000028208	RBM15	97	53.918	Felis_catus
ENSGAFG00000021611	-	62	56.627	ENSFALG00000003062	RBM15	99	61.377	Ficedula_albicollis
ENSGAFG00000021611	-	98	51.616	ENSFDAG00000020743	RBM15	97	53.620	Fukomys_damarensis
ENSGAFG00000021611	-	96	79.858	ENSFHEG00000005559	-	100	79.858	Fundulus_heteroclitus
ENSGAFG00000021611	-	96	60.165	ENSFHEG00000005024	rbm15	100	60.400	Fundulus_heteroclitus
ENSGAFG00000021611	-	61	67.724	ENSGMOG00000019941	rbm15	100	67.724	Gadus_morhua
ENSGAFG00000021611	-	82	52.619	ENSGALG00000000401	RBM15	100	51.086	Gallus_gallus
ENSGAFG00000021611	-	96	60.256	ENSGACG00000007932	rbm15	99	60.490	Gasterosteus_aculeatus
ENSGAFG00000021611	-	95	70.720	ENSGACG00000001022	-	99	70.720	Gasterosteus_aculeatus
ENSGAFG00000021611	-	82	52.467	ENSGAGG00000012252	RBM15	100	51.753	Gopherus_agassizii
ENSGAFG00000021611	-	98	52.351	ENSGGOG00000003655	RBM15	96	54.127	Gorilla_gorilla
ENSGAFG00000021611	-	96	59.770	ENSHBUG00000022227	rbm15	100	60.000	Haplochromis_burtoni
ENSGAFG00000021611	-	96	71.915	ENSHBUG00000003220	-	100	72.033	Haplochromis_burtoni
ENSGAFG00000021611	-	98	51.829	ENSHGLG00000014811	RBM15	97	53.838	Heterocephalus_glaber_female
ENSGAFG00000021611	-	98	51.829	ENSHGLG00100017137	RBM15	97	53.838	Heterocephalus_glaber_male
ENSGAFG00000021611	-	96	60.570	ENSHCOG00000005229	RBM15	100	60.926	Hippocampus_comes
ENSGAFG00000021611	-	96	60.023	ENSHCOG00000004048	rbm15	100	60.141	Hippocampus_comes
ENSGAFG00000021611	-	96	60.945	ENSIPUG00000004415	RBM15	100	61.521	Ictalurus_punctatus
ENSGAFG00000021611	-	98	52.296	ENSSTOG00000026597	RBM15	97	54.023	Ictidomys_tridecemlineatus
ENSGAFG00000021611	-	97	52.421	ENSJJAG00000021795	Rbm15	97	53.486	Jaculus_jaculus
ENSGAFG00000021611	-	96	60.560	ENSKMAG00000017681	rbm15	100	60.677	Kryptolebias_marmoratus
ENSGAFG00000021611	-	96	69.675	ENSKMAG00000021291	-	99	70.228	Kryptolebias_marmoratus
ENSGAFG00000021611	-	96	61.440	ENSLBEG00000008274	rbm15	100	61.556	Labrus_bergylta
ENSGAFG00000021611	-	92	69.417	ENSLBEG00000013105	-	100	69.539	Labrus_bergylta
ENSGAFG00000021611	-	96	57.919	ENSLACG00000018372	RBM15	100	58.728	Latimeria_chalumnae
ENSGAFG00000021611	-	96	61.889	ENSLOCG00000017940	rbm15	100	62.571	Lepisosteus_oculatus
ENSGAFG00000021611	-	98	51.929	ENSLAFG00000012897	RBM15	97	53.830	Loxodonta_africana
ENSGAFG00000021611	-	98	51.883	ENSMFAG00000029929	RBM15	97	53.613	Macaca_fascicularis
ENSGAFG00000021611	-	98	51.937	ENSMMUG00000015020	RBM15	97	53.613	Macaca_mulatta
ENSGAFG00000021611	-	98	51.883	ENSMNEG00000045235	RBM15	97	53.613	Macaca_nemestrina
ENSGAFG00000021611	-	98	51.667	ENSMLEG00000035727	RBM15	96	53.508	Mandrillus_leucophaeus
ENSGAFG00000021611	-	96	60.140	ENSMAMG00000010732	rbm15	100	60.373	Mastacembelus_armatus
ENSGAFG00000021611	-	92	69.119	ENSMAMG00000023921	-	100	69.602	Mastacembelus_armatus
ENSGAFG00000021611	-	96	60.046	ENSMZEG00005006595	rbm15	100	60.277	Maylandia_zebra
ENSGAFG00000021611	-	95	71.747	ENSMZEG00005010876	-	98	71.864	Maylandia_zebra
ENSGAFG00000021611	-	95	52.095	ENSMAUG00000007198	Rbm15	95	53.946	Mesocricetus_auratus
ENSGAFG00000021611	-	98	51.883	ENSMICG00000005255	RBM15	97	53.717	Microcebus_murinus
ENSGAFG00000021611	-	95	52.309	ENSMOCG00000013142	Rbm15	95	54.270	Microtus_ochrogaster
ENSGAFG00000021611	-	96	60.279	ENSMMOG00000002357	rbm15	100	60.255	Mola_mola
ENSGAFG00000021611	-	96	68.072	ENSMMOG00000021778	-	100	68.072	Mola_mola
ENSGAFG00000021611	-	96	67.953	ENSMALG00000017867	-	100	67.719	Monopterus_albus
ENSGAFG00000021611	-	96	60.303	ENSMALG00000019648	rbm15	100	60.652	Monopterus_albus
ENSGAFG00000021611	-	95	51.987	MGP_CAROLIEiJ_G0025501	Rbm15	95	53.772	Mus_caroli
ENSGAFG00000021611	-	95	51.987	ENSMUSG00000048109	Rbm15	95	53.772	Mus_musculus
ENSGAFG00000021611	-	95	51.987	MGP_PahariEiJ_G0026947	Rbm15	95	53.730	Mus_pahari
ENSGAFG00000021611	-	95	51.987	MGP_SPRETEiJ_G0026451	Rbm15	95	53.772	Mus_spretus
ENSGAFG00000021611	-	98	51.879	ENSMPUG00000003822	RBM15	97	53.710	Mustela_putorius_furo
ENSGAFG00000021611	-	98	52.101	ENSMLUG00000007169	RBM15	96	54.346	Myotis_lucifugus
ENSGAFG00000021611	-	98	51.566	ENSNGAG00000011394	Rbm15	96	54.140	Nannospalax_galili
ENSGAFG00000021611	-	96	71.813	ENSNBRG00000005460	-	100	71.930	Neolamprologus_brichardi
ENSGAFG00000021611	-	96	59.885	ENSNBRG00000008870	rbm15	100	60.115	Neolamprologus_brichardi
ENSGAFG00000021611	-	96	59.885	ENSNBRG00000003947	rbm15	100	60.115	Neolamprologus_brichardi
ENSGAFG00000021611	-	98	52.665	ENSNLEG00000003601	RBM15	96	54.127	Nomascus_leucogenys
ENSGAFG00000021611	-	98	52.853	ENSMEUG00000015940	RBM15	95	54.759	Notamacropus_eugenii
ENSGAFG00000021611	-	96	52.295	ENSODEG00000019343	RBM15	100	54.194	Octodon_degus
ENSGAFG00000021611	-	96	60.514	ENSONIG00000002532	rbm15	100	60.748	Oreochromis_niloticus
ENSGAFG00000021611	-	92	72.904	ENSONIG00000018955	-	100	72.904	Oreochromis_niloticus
ENSGAFG00000021611	-	98	52.351	ENSOCUG00000002434	RBM15	97	54.023	Oryctolagus_cuniculus
ENSGAFG00000021611	-	96	69.467	ENSORLG00000000433	-	99	69.941	Oryzias_latipes
ENSGAFG00000021611	-	96	60.727	ENSORLG00000006197	rbm15	100	60.961	Oryzias_latipes
ENSGAFG00000021611	-	96	60.492	ENSORLG00020011223	rbm15	100	60.727	Oryzias_latipes_hni
ENSGAFG00000021611	-	96	69.076	ENSORLG00020008048	-	100	69.550	Oryzias_latipes_hni
ENSGAFG00000021611	-	96	60.844	ENSORLG00015003078	rbm15	100	61.079	Oryzias_latipes_hsok
ENSGAFG00000021611	-	96	69.340	ENSORLG00015004063	-	100	69.929	Oryzias_latipes_hsok
ENSGAFG00000021611	-	96	68.128	ENSOMEG00000014662	-	100	68.720	Oryzias_melastigma
ENSGAFG00000021611	-	96	60.256	ENSOMEG00000020683	rbm15	100	60.373	Oryzias_melastigma
ENSGAFG00000021611	-	96	53.598	ENSOGAG00000009182	RBM15	100	54.652	Otolemur_garnettii
ENSGAFG00000021611	-	95	52.575	ENSOARG00000019430	RBM15	93	54.477	Ovis_aries
ENSGAFG00000021611	-	98	51.987	ENSPPAG00000041967	RBM15	94	54.304	Pan_paniscus
ENSGAFG00000021611	-	98	52.088	ENSPPRG00000013347	RBM15	97	53.918	Panthera_pardus
ENSGAFG00000021611	-	98	53.198	ENSPTIG00000010318	RBM15	97	54.259	Panthera_tigris_altaica
ENSGAFG00000021611	-	98	51.987	ENSPTRG00000001074	RBM15	95	54.255	Pan_troglodytes
ENSGAFG00000021611	-	98	51.667	ENSPANG00000020891	RBM15	97	53.508	Papio_anubis
ENSGAFG00000021611	-	96	62.998	ENSPKIG00000003067	-	100	63.115	Paramormyrops_kingsleyae
ENSGAFG00000021611	-	81	62.228	ENSPKIG00000013584	rbm15	90	62.246	Paramormyrops_kingsleyae
ENSGAFG00000021611	-	55	52.985	ENSPSIG00000001607	RBM15	100	52.239	Pelodiscus_sinensis
ENSGAFG00000021611	-	96	69.048	ENSPMGG00000017642	-	100	70.190	Periophthalmus_magnuspinnatus
ENSGAFG00000021611	-	96	60.610	ENSPMGG00000016039	rbm15	100	60.844	Periophthalmus_magnuspinnatus
ENSGAFG00000021611	-	95	51.832	ENSPEMG00000000014	Rbm15	95	53.688	Peromyscus_maniculatus_bairdii
ENSGAFG00000021611	-	82	57.089	ENSPCIG00000003458	RBM15	94	54.821	Phascolarctos_cinereus
ENSGAFG00000021611	-	95	59.112	ENSPFOG00000012754	rbm15	97	59.112	Poecilia_formosa
ENSGAFG00000021611	-	96	60.023	ENSPLAG00000003560	rbm15	100	60.140	Poecilia_latipinna
ENSGAFG00000021611	-	96	95.048	ENSPLAG00000015343	-	100	95.048	Poecilia_latipinna
ENSGAFG00000021611	-	96	94.928	ENSPMEG00000001923	-	100	94.928	Poecilia_mexicana
ENSGAFG00000021611	-	96	60.023	ENSPMEG00000002049	rbm15	100	60.140	Poecilia_mexicana
ENSGAFG00000021611	-	96	94.807	ENSPREG00000004167	-	100	94.807	Poecilia_reticulata
ENSGAFG00000021611	-	96	59.674	ENSPREG00000014581	rbm15	100	59.790	Poecilia_reticulata
ENSGAFG00000021611	-	98	51.987	ENSPPYG00000001051	RBM15	97	53.717	Pongo_abelii
ENSGAFG00000021611	-	62	44.563	ENSPPYG00000015734	-	99	44.563	Pongo_abelii
ENSGAFG00000021611	-	69	53.834	ENSPCAG00000006329	RBM15	65	56.000	Procavia_capensis
ENSGAFG00000021611	-	98	52.242	ENSPCOG00000019767	RBM15	97	54.015	Propithecus_coquereli
ENSGAFG00000021611	-	98	52.038	ENSPVAG00000007193	RBM15	96	53.814	Pteropus_vampyrus
ENSGAFG00000021611	-	96	59.931	ENSPNYG00000005143	rbm15	100	59.931	Pundamilia_nyererei
ENSGAFG00000021611	-	96	71.813	ENSPNYG00000007434	-	100	71.930	Pundamilia_nyererei
ENSGAFG00000021611	-	96	62.284	ENSPNAG00000007496	rbm15	100	63.091	Pygocentrus_nattereri
ENSGAFG00000021611	-	95	51.987	ENSRNOG00000047499	Rbm15	95	53.838	Rattus_norvegicus
ENSGAFG00000021611	-	98	51.728	ENSRBIG00000044261	RBM15	97	53.403	Rhinopithecus_bieti
ENSGAFG00000021611	-	98	51.728	ENSRROG00000045519	RBM15	97	53.403	Rhinopithecus_roxellana
ENSGAFG00000021611	-	98	52.406	ENSSBOG00000021394	RBM15	96	54.154	Saimiri_boliviensis_boliviensis
ENSGAFG00000021611	-	96	60.970	ENSSMAG00000019106	rbm15	100	61.066	Scophthalmus_maximus
ENSGAFG00000021611	-	96	71.194	ENSSMAG00000000431	-	99	71.429	Scophthalmus_maximus
ENSGAFG00000021611	-	96	73.893	ENSSDUG00000009424	-	100	74.009	Seriola_dumerili
ENSGAFG00000021611	-	96	60.490	ENSSDUG00000008769	rbm15	100	60.723	Seriola_dumerili
ENSGAFG00000021611	-	96	60.490	ENSSLDG00000002691	rbm15	100	60.723	Seriola_lalandi_dorsalis
ENSGAFG00000021611	-	96	73.660	ENSSLDG00000022441	-	100	74.126	Seriola_lalandi_dorsalis
ENSGAFG00000021611	-	84	51.163	ENSSARG00000000360	RBM15	85	53.151	Sorex_araneus
ENSGAFG00000021611	-	96	61.092	ENSSPAG00000004965	rbm15	100	61.324	Stegastes_partitus
ENSGAFG00000021611	-	96	73.036	ENSSPAG00000007739	-	99	73.740	Stegastes_partitus
ENSGAFG00000021611	-	98	52.142	ENSSSCG00000006809	RBM15	100	54.672	Sus_scrofa
ENSGAFG00000021611	-	62	55.017	ENSTGUG00000000886	RBM15	99	56.228	Taeniopygia_guttata
ENSGAFG00000021611	-	95	65.248	ENSTRUG00000007851	-	97	65.248	Takifugu_rubripes
ENSGAFG00000021611	-	96	59.602	ENSTRUG00000002921	rbm15	100	59.743	Takifugu_rubripes
ENSGAFG00000021611	-	96	58.685	ENSTNIG00000015129	rbm15	99	58.685	Tetraodon_nigroviridis
ENSGAFG00000021611	-	98	52.242	ENSTBEG00000008339	RBM15	95	54.088	Tupaia_belangeri
ENSGAFG00000021611	-	98	51.778	ENSTTRG00000001317	RBM15	96	53.452	Tursiops_truncatus
ENSGAFG00000021611	-	98	52.083	ENSUAMG00000017330	RBM15	98	53.854	Ursus_americanus
ENSGAFG00000021611	-	98	51.879	ENSUMAG00000013623	RBM15	97	53.710	Ursus_maritimus
ENSGAFG00000021611	-	98	52.151	ENSVVUG00000002929	RBM15	95	54.198	Vulpes_vulpes
ENSGAFG00000021611	-	96	53.233	ENSXETG00000002029	rbm15	100	53.395	Xenopus_tropicalis
ENSGAFG00000021611	-	96	59.860	ENSXCOG00000006328	rbm15	100	59.977	Xiphophorus_couchianus
ENSGAFG00000021611	-	96	96.014	ENSXCOG00000003003	-	100	96.014	Xiphophorus_couchianus
ENSGAFG00000021611	-	96	96.014	ENSXMAG00000009062	-	100	96.014	Xiphophorus_maculatus
ENSGAFG00000021611	-	96	59.860	ENSXMAG00000020192	rbm15	100	59.977	Xiphophorus_maculatus