EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000021630 (Gene tree)
Gene ID: -
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 17956 bases
Position: chrNHOQ01001373.1:735742-753697
Accession: ZDB-GENE-010601-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000032134	Val_tRNA-synt_C	PF10458.9	1.5e-05	1	1
ENSGAFP00000032134	tRNA-synt_1g	PF09334.11	4.5e-13	1	1
ENSGAFP00000032134	Anticodon_1	PF08264.13	5.4e-35	1	1
ENSGAFP00000032134	tRNA-synt_1	PF00133.22	2.6e-207	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000032465	-	4492	-	ENSGAFP00000032134	1274 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000021630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000021630's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000021630	vars	66	59.375	ENSGAFG00000004737	vars2	91	59.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000021630	vars	100	65.370	ENSG00000204394	VARS	99	72.699	Homo_sapiens
ENSGAFG00000021630	vars	94	90.266	ENSAPOG00000020921	vars	96	90.266	Acanthochromis_polyacanthus
ENSGAFG00000021630	vars	94	90.266	ENSAPOG00000020691	vars	96	90.266	Acanthochromis_polyacanthus
ENSGAFG00000021630	vars	100	65.474	ENSAMEG00000006417	VARS	100	65.531	Ailuropoda_melanoleuca
ENSGAFG00000021630	vars	100	89.812	ENSACIG00000013752	vars	100	89.812	Amphilophus_citrinellus
ENSGAFG00000021630	vars	100	90.738	ENSAOCG00000002447	vars	99	90.738	Amphiprion_ocellaris
ENSGAFG00000021630	vars	100	90.581	ENSAPEG00000010638	vars	99	90.581	Amphiprion_percula
ENSGAFG00000021630	vars	100	86.061	ENSATEG00000020219	vars	100	85.748	Anabas_testudineus
ENSGAFG00000021630	vars	90	71.788	ENSACAG00000029133	-	99	71.788	Anolis_carolinensis
ENSGAFG00000021630	vars	100	65.370	ENSANAG00000015453	VARS	100	65.370	Aotus_nancymaae
ENSGAFG00000021630	vars	100	91.223	ENSACLG00000025699	vars	97	91.223	Astatotilapia_calliptera
ENSGAFG00000021630	vars	96	80.131	ENSAMXG00000017716	vars	96	80.131	Astyanax_mexicanus
ENSGAFG00000021630	vars	100	65.759	ENSBTAG00000005631	VARS	100	65.759	Bos_taurus
ENSGAFG00000021630	vars	100	65.292	ENSCJAG00000002604	VARS	100	65.292	Callithrix_jacchus
ENSGAFG00000021630	vars	100	65.136	ENSCAFG00000000636	VARS	100	65.194	Canis_familiaris
ENSGAFG00000021630	vars	94	66.390	ENSCAFG00020020790	VARS	96	66.390	Canis_lupus_dingo
ENSGAFG00000021630	vars	100	66.019	ENSCHIG00000011008	VARS	100	66.019	Capra_hircus
ENSGAFG00000021630	vars	100	65.214	ENSTSYG00000001567	VARS	100	65.214	Carlito_syrichta
ENSGAFG00000021630	vars	91	68.566	ENSCAPG00000013736	VARS	98	68.253	Cavia_aperea
ENSGAFG00000021630	vars	100	65.190	ENSCPOG00000000870	VARS	100	64.903	Cavia_porcellus
ENSGAFG00000021630	vars	100	65.603	ENSCCAG00000035656	VARS	100	65.447	Cebus_capucinus
ENSGAFG00000021630	vars	100	65.657	ENSCATG00000022394	VARS	100	65.681	Cercocebus_atys
ENSGAFG00000021630	vars	93	64.548	ENSCLAG00000009470	VARS	97	64.245	Chinchilla_lanigera
ENSGAFG00000021630	vars	100	65.423	ENSCSAG00000008784	VARS	100	65.447	Chlorocebus_sabaeus
ENSGAFG00000021630	vars	77	74.924	ENSCPBG00000007943	VARS	96	74.924	Chrysemys_picta_bellii
ENSGAFG00000021630	vars	100	65.579	ENSCANG00000033570	VARS	100	65.603	Colobus_angolensis_palliatus
ENSGAFG00000021630	vars	100	65.370	ENSCGRG00001005686	Vars	100	65.447	Cricetulus_griseus_chok1gshd
ENSGAFG00000021630	vars	93	63.457	ENSCGRG00000013352	Vars	78	63.539	Cricetulus_griseus_crigri
ENSGAFG00000021630	vars	100	82.680	ENSCSEG00000019652	vars	100	82.445	Cynoglossus_semilaevis
ENSGAFG00000021630	vars	100	95.455	ENSCVAG00000022398	vars	100	95.455	Cyprinodon_variegatus
ENSGAFG00000021630	vars	100	84.417	ENSDARG00000044575	vars	100	84.417	Danio_rerio
ENSGAFG00000021630	vars	85	68.677	ENSDORG00000016433	Vars	99	68.767	Dipodomys_ordii
ENSGAFG00000021630	vars	68	74.141	ENSETEG00000003824	VARS	77	74.141	Echinops_telfairi
ENSGAFG00000021630	vars	57	65.253	ENSEBUG00000004637	vars	100	65.253	Eptatretus_burgeri
ENSGAFG00000021630	vars	52	72.270	ENSEBUG00000007086	vars	83	72.270	Eptatretus_burgeri
ENSGAFG00000021630	vars	100	65.992	ENSEASG00005015673	VARS	100	65.992	Equus_asinus_asinus
ENSGAFG00000021630	vars	100	65.941	ENSECAG00000014620	VARS	100	66.174	Equus_caballus
ENSGAFG00000021630	vars	72	71.429	ENSEEUG00000004116	VARS	73	71.429	Erinaceus_europaeus
ENSGAFG00000021630	vars	100	83.463	ENSELUG00000006550	vars	97	83.710	Esox_lucius
ENSGAFG00000021630	vars	100	65.603	ENSFCAG00000004510	VARS	100	65.759	Felis_catus
ENSGAFG00000021630	vars	83	70.920	ENSFDAG00000011401	VARS	100	70.734	Fukomys_damarensis
ENSGAFG00000021630	vars	100	93.730	ENSFHEG00000010672	vars	100	93.809	Fundulus_heteroclitus
ENSGAFG00000021630	vars	100	81.153	ENSGMOG00000014908	vars	100	81.153	Gadus_morhua
ENSGAFG00000021630	vars	100	84.038	ENSGACG00000009601	vars	100	84.272	Gasterosteus_aculeatus
ENSGAFG00000021630	vars	50	57.500	ENSGAGG00000006508	-	91	59.531	Gopherus_agassizii
ENSGAFG00000021630	vars	100	65.734	ENSGGOG00000011364	VARS	100	65.734	Gorilla_gorilla
ENSGAFG00000021630	vars	100	91.301	ENSHBUG00000017151	vars	97	91.301	Haplochromis_burtoni
ENSGAFG00000021630	vars	100	65.421	ENSHGLG00000011646	VARS	100	65.421	Heterocephalus_glaber_female
ENSGAFG00000021630	vars	94	61.916	ENSHGLG00100018062	VARS	99	61.557	Heterocephalus_glaber_male
ENSGAFG00000021630	vars	99	84.832	ENSHCOG00000012198	vars	99	84.832	Hippocampus_comes
ENSGAFG00000021630	vars	100	83.099	ENSIPUG00000005218	vars	100	83.177	Ictalurus_punctatus
ENSGAFG00000021630	vars	100	65.837	ENSSTOG00000013112	VARS	100	65.914	Ictidomys_tridecemlineatus
ENSGAFG00000021630	vars	100	65.241	ENSJJAG00000019749	-	100	64.926	Jaculus_jaculus
ENSGAFG00000021630	vars	100	53.323	ENSJJAG00000015343	-	99	54.802	Jaculus_jaculus
ENSGAFG00000021630	vars	100	88.305	ENSKMAG00000009455	vars	100	88.305	Kryptolebias_marmoratus
ENSGAFG00000021630	vars	100	85.976	ENSLBEG00000010341	vars	100	85.165	Labrus_bergylta
ENSGAFG00000021630	vars	94	65.794	ENSLACG00000015232	VARS	99	67.182	Latimeria_chalumnae
ENSGAFG00000021630	vars	100	74.824	ENSLOCG00000004240	vars	100	74.588	Lepisosteus_oculatus
ENSGAFG00000021630	vars	100	65.421	ENSLAFG00000023090	VARS	100	65.421	Loxodonta_africana
ENSGAFG00000021630	vars	100	65.501	ENSMFAG00000001032	VARS	100	65.525	Macaca_fascicularis
ENSGAFG00000021630	vars	100	65.501	ENSMMUG00000006828	VARS	100	65.525	Macaca_mulatta
ENSGAFG00000021630	vars	100	65.501	ENSMNEG00000042072	VARS	100	65.525	Macaca_nemestrina
ENSGAFG00000021630	vars	100	65.579	ENSMLEG00000039307	VARS	100	65.603	Mandrillus_leucophaeus
ENSGAFG00000021630	vars	100	88.697	ENSMAMG00000003949	vars	100	88.697	Mastacembelus_armatus
ENSGAFG00000021630	vars	100	91.301	ENSMZEG00005018327	vars	97	91.301	Maylandia_zebra
ENSGAFG00000021630	vars	100	65.214	ENSMAUG00000006715	Vars	100	65.292	Mesocricetus_auratus
ENSGAFG00000021630	vars	100	65.683	ENSMICG00000003548	VARS	100	65.603	Microcebus_murinus
ENSGAFG00000021630	vars	100	64.252	ENSMOCG00000015404	Vars	100	64.252	Microtus_ochrogaster
ENSGAFG00000021630	vars	100	86.196	ENSMMOG00000015801	vars	100	86.118	Mola_mola
ENSGAFG00000021630	vars	100	65.837	ENSMODG00000015204	-	100	65.759	Monodelphis_domestica
ENSGAFG00000021630	vars	99	89.350	ENSMALG00000022532	vars	99	89.350	Monopterus_albus
ENSGAFG00000021630	vars	100	66.044	MGP_CAROLIEiJ_G0021491	Vars	100	66.044	Mus_caroli
ENSGAFG00000021630	vars	100	65.888	ENSMUSG00000007029	Vars	100	65.888	Mus_musculus
ENSGAFG00000021630	vars	100	65.810	MGP_PahariEiJ_G0020486	Vars	100	65.810	Mus_pahari
ENSGAFG00000021630	vars	100	65.966	MGP_SPRETEiJ_G0022396	Vars	100	65.966	Mus_spretus
ENSGAFG00000021630	vars	100	65.447	ENSMPUG00000010821	VARS	100	65.447	Mustela_putorius_furo
ENSGAFG00000021630	vars	78	68.395	ENSMLUG00000013126	VARS	100	68.395	Myotis_lucifugus
ENSGAFG00000021630	vars	100	65.576	ENSNGAG00000012151	Vars	100	65.576	Nannospalax_galili
ENSGAFG00000021630	vars	100	90.987	ENSNBRG00000020520	vars	100	90.987	Neolamprologus_brichardi
ENSGAFG00000021630	vars	100	65.423	ENSNLEG00000006351	VARS	100	65.423	Nomascus_leucogenys
ENSGAFG00000021630	vars	100	64.330	ENSMEUG00000011378	VARS	100	64.408	Notamacropus_eugenii
ENSGAFG00000021630	vars	100	65.525	ENSOPRG00000003607	VARS	100	65.603	Ochotona_princeps
ENSGAFG00000021630	vars	100	64.679	ENSODEG00000017681	VARS	100	64.679	Octodon_degus
ENSGAFG00000021630	vars	100	90.703	ENSONIG00000013064	vars	100	91.725	Oreochromis_niloticus
ENSGAFG00000021630	vars	77	67.491	ENSOANG00000005400	VARS	98	67.491	Ornithorhynchus_anatinus
ENSGAFG00000021630	vars	100	64.174	ENSOCUG00000022463	VARS	100	63.833	Oryctolagus_cuniculus
ENSGAFG00000021630	vars	100	88.716	ENSORLG00000013063	vars	100	89.027	Oryzias_latipes
ENSGAFG00000021630	vars	100	89.445	ENSORLG00020003504	vars	100	89.367	Oryzias_latipes_hni
ENSGAFG00000021630	vars	100	89.671	ENSORLG00015009001	vars	100	89.671	Oryzias_latipes_hsok
ENSGAFG00000021630	vars	100	90.063	ENSOMEG00000015016	vars	100	90.063	Oryzias_melastigma
ENSGAFG00000021630	vars	100	65.214	ENSOGAG00000007515	VARS	100	65.093	Otolemur_garnettii
ENSGAFG00000021630	vars	100	65.370	ENSPPAG00000034012	VARS	100	65.370	Pan_paniscus
ENSGAFG00000021630	vars	100	65.603	ENSPPRG00000014855	VARS	100	65.759	Panthera_pardus
ENSGAFG00000021630	vars	86	69.406	ENSPTIG00000010462	VARS	93	69.589	Panthera_tigris_altaica
ENSGAFG00000021630	vars	100	65.292	ENSPTRG00000017985	VARS	100	65.292	Pan_troglodytes
ENSGAFG00000021630	vars	100	64.114	ENSPANG00000014565	VARS	100	64.136	Papio_anubis
ENSGAFG00000021630	vars	100	80.000	ENSPKIG00000016304	vars	100	80.000	Paramormyrops_kingsleyae
ENSGAFG00000021630	vars	100	84.301	ENSPMGG00000023909	vars	100	84.066	Periophthalmus_magnuspinnatus
ENSGAFG00000021630	vars	100	65.447	ENSPEMG00000006639	Vars	100	65.525	Peromyscus_maniculatus_bairdii
ENSGAFG00000021630	vars	100	65.603	ENSPCIG00000018553	VARS	100	65.525	Phascolarctos_cinereus
ENSGAFG00000021630	vars	100	97.724	ENSPFOG00000015690	vars	100	97.724	Poecilia_formosa
ENSGAFG00000021630	vars	100	97.488	ENSPLAG00000009590	vars	100	97.488	Poecilia_latipinna
ENSGAFG00000021630	vars	100	97.645	ENSPMEG00000004708	vars	100	97.645	Poecilia_mexicana
ENSGAFG00000021630	vars	100	92.308	ENSPREG00000013264	vars	100	92.308	Poecilia_reticulata
ENSGAFG00000021630	vars	100	63.764	ENSPPYG00000016460	VARS	100	64.125	Pongo_abelii
ENSGAFG00000021630	vars	86	67.140	ENSPCAG00000013565	VARS	86	67.140	Procavia_capensis
ENSGAFG00000021630	vars	100	65.397	ENSPCOG00000010942	VARS	100	65.630	Propithecus_coquereli
ENSGAFG00000021630	vars	100	62.937	ENSPVAG00000012403	VARS	100	63.191	Pteropus_vampyrus
ENSGAFG00000021630	vars	100	91.379	ENSPNYG00000022511	vars	100	91.379	Pundamilia_nyererei
ENSGAFG00000021630	vars	100	83.997	ENSPNAG00000020962	vars	100	84.412	Pygocentrus_nattereri
ENSGAFG00000021630	vars	100	65.525	ENSRNOG00000000867	Vars	100	65.370	Rattus_norvegicus
ENSGAFG00000021630	vars	100	65.501	ENSRBIG00000041669	VARS	100	65.525	Rhinopithecus_bieti
ENSGAFG00000021630	vars	100	65.501	ENSRROG00000045490	VARS	100	65.525	Rhinopithecus_roxellana
ENSGAFG00000021630	vars	100	65.292	ENSSBOG00000035402	VARS	100	65.292	Saimiri_boliviensis_boliviensis
ENSGAFG00000021630	vars	100	65.023	ENSSHAG00000006937	VARS	100	65.054	Sarcophilus_harrisii
ENSGAFG00000021630	vars	100	80.125	ENSSFOG00015014272	vars	100	80.125	Scleropages_formosus
ENSGAFG00000021630	vars	100	88.263	ENSSMAG00000009596	vars	99	88.341	Scophthalmus_maximus
ENSGAFG00000021630	vars	100	90.689	ENSSDUG00000014177	vars	100	90.689	Seriola_dumerili
ENSGAFG00000021630	vars	100	90.297	ENSSLDG00000025316	vars	100	90.454	Seriola_lalandi_dorsalis
ENSGAFG00000021630	vars	100	90.031	ENSSPAG00000017068	vars	100	90.267	Stegastes_partitus
ENSGAFG00000021630	vars	100	65.241	ENSSSCG00000038950	VARS	100	65.474	Sus_scrofa
ENSGAFG00000021630	vars	82	81.358	ENSTRUG00000012307	vars	98	81.202	Takifugu_rubripes
ENSGAFG00000021630	vars	100	86.129	ENSTNIG00000008011	vars	100	86.129	Tetraodon_nigroviridis
ENSGAFG00000021630	vars	100	60.125	ENSTTRG00000014128	VARS	100	60.125	Tursiops_truncatus
ENSGAFG00000021630	vars	100	63.997	ENSUAMG00000010424	VARS	100	64.125	Ursus_americanus
ENSGAFG00000021630	vars	100	60.483	ENSUMAG00000013486	VARS	98	64.557	Ursus_maritimus
ENSGAFG00000021630	vars	100	65.579	ENSVVUG00000021323	VARS	100	65.319	Vulpes_vulpes
ENSGAFG00000021630	vars	100	64.297	ENSXETG00000024076	vars	100	64.022	Xenopus_tropicalis
ENSGAFG00000021630	vars	100	95.369	ENSXCOG00000019172	vars	100	95.369	Xiphophorus_couchianus
ENSGAFG00000021630	vars	100	98.587	ENSXMAG00000010927	vars	100	98.587	Xiphophorus_maculatus