EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000021639 (Gene tree)
Gene ID: -
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein 48 (U11/U12)
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5023 bases
Position: chrNHOQ01001373.1:852081-857103
Accession: ZDB-GENE-030131-4482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000032143	zf-U11-48K	PF05253.12	5.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000032474	-	1445	-	ENSGAFP00000032143	342 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000021639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000021639's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000021639	snrnp48	81	43.807	ENSG00000168566	SNRNP48	82	48.239	Homo_sapiens
ENSGAFG00000021639	snrnp48	96	75.000	ENSAPOG00000021430	snrnp48	95	74.540	Acanthochromis_polyacanthus
ENSGAFG00000021639	snrnp48	93	44.970	ENSAMEG00000017349	SNRNP48	71	49.206	Ailuropoda_melanoleuca
ENSGAFG00000021639	snrnp48	94	70.717	ENSACIG00000002032	snrnp48	95	70.859	Amphilophus_citrinellus
ENSGAFG00000021639	snrnp48	95	74.233	ENSAOCG00000010562	snrnp48	95	73.926	Amphiprion_ocellaris
ENSGAFG00000021639	snrnp48	95	73.926	ENSAPEG00000003231	snrnp48	95	73.620	Amphiprion_percula
ENSGAFG00000021639	snrnp48	93	74.143	ENSATEG00000020210	snrnp48	94	75.078	Anabas_testudineus
ENSGAFG00000021639	snrnp48	81	49.660	ENSACAG00000002811	SNRNP48	71	54.113	Anolis_carolinensis
ENSGAFG00000021639	snrnp48	81	44.109	ENSANAG00000033538	SNRNP48	82	48.592	Aotus_nancymaae
ENSGAFG00000021639	snrnp48	94	56.881	ENSAMXG00000015309	snrnp48	78	65.134	Astyanax_mexicanus
ENSGAFG00000021639	snrnp48	92	42.985	ENSBTAG00000001123	SNRNP48	73	49.219	Bos_taurus
ENSGAFG00000021639	snrnp48	81	44.109	ENSCJAG00000021330	SNRNP48	82	48.592	Callithrix_jacchus
ENSGAFG00000021639	snrnp48	92	43.114	ENSCAFG00000009574	SNRNP48	61	48.617	Canis_familiaris
ENSGAFG00000021639	snrnp48	92	43.413	ENSCAFG00020013203	SNRNP48	72	48.617	Canis_lupus_dingo
ENSGAFG00000021639	snrnp48	85	43.385	ENSCHIG00000015216	SNRNP48	73	49.219	Capra_hircus
ENSGAFG00000021639	snrnp48	93	42.566	ENSTSYG00000000698	SNRNP48	95	42.353	Carlito_syrichta
ENSGAFG00000021639	snrnp48	87	45.253	ENSCAPG00000006768	SNRNP48	81	48.810	Cavia_aperea
ENSGAFG00000021639	snrnp48	93	44.315	ENSCPOG00000007910	SNRNP48	82	47.183	Cavia_porcellus
ENSGAFG00000021639	snrnp48	80	47.535	ENSCCAG00000035652	SNRNP48	73	50.593	Cebus_capucinus
ENSGAFG00000021639	snrnp48	93	44.315	ENSCATG00000033947	SNRNP48	82	47.887	Cercocebus_atys
ENSGAFG00000021639	snrnp48	81	44.109	ENSCLAG00000003765	SNRNP48	82	48.592	Chinchilla_lanigera
ENSGAFG00000021639	snrnp48	81	44.109	ENSCSAG00000007409	SNRNP48	82	48.592	Chlorocebus_sabaeus
ENSGAFG00000021639	snrnp48	81	48.311	ENSCPBG00000019146	SNRNP48	64	55.882	Chrysemys_picta_bellii
ENSGAFG00000021639	snrnp48	81	44.109	ENSCANG00000030017	SNRNP48	73	51.172	Colobus_angolensis_palliatus
ENSGAFG00000021639	snrnp48	80	42.254	ENSCGRG00001008805	-	80	42.578	Cricetulus_griseus_chok1gshd
ENSGAFG00000021639	snrnp48	94	43.787	ENSCGRG00001001076	-	95	42.319	Cricetulus_griseus_chok1gshd
ENSGAFG00000021639	snrnp48	94	43.787	ENSCGRG00000007781	Snrnp48	95	42.319	Cricetulus_griseus_crigri
ENSGAFG00000021639	snrnp48	75	69.531	ENSCSEG00000000722	snrnp48	76	67.910	Cynoglossus_semilaevis
ENSGAFG00000021639	snrnp48	92	81.470	ENSCVAG00000019829	snrnp48	72	84.173	Cyprinodon_variegatus
ENSGAFG00000021639	snrnp48	92	54.062	ENSDARG00000039989	snrnp48	79	58.148	Danio_rerio
ENSGAFG00000021639	snrnp48	80	46.316	ENSDNOG00000014978	SNRNP48	81	41.880	Dasypus_novemcinctus
ENSGAFG00000021639	snrnp48	93	43.149	ENSDORG00000015140	Snrnp48	74	49.027	Dipodomys_ordii
ENSGAFG00000021639	snrnp48	80	47.163	ENSEASG00005012021	SNRNP48	74	50.000	Equus_asinus_asinus
ENSGAFG00000021639	snrnp48	80	47.163	ENSECAG00000026937	SNRNP48	74	50.000	Equus_caballus
ENSGAFG00000021639	snrnp48	93	31.343	ENSEEUG00000015437	SNRNP48	82	32.975	Erinaceus_europaeus
ENSGAFG00000021639	snrnp48	94	58.702	ENSELUG00000009766	snrnp48	73	63.602	Esox_lucius
ENSGAFG00000021639	snrnp48	80	42.683	ENSFCAG00000018853	SNRNP48	73	49.407	Felis_catus
ENSGAFG00000021639	snrnp48	68	54.583	ENSFALG00000007797	SNRNP48	72	56.332	Ficedula_albicollis
ENSGAFG00000021639	snrnp48	94	44.214	ENSFDAG00000009231	SNRNP48	73	50.000	Fukomys_damarensis
ENSGAFG00000021639	snrnp48	59	90.594	ENSFHEG00000014647	snrnp48	95	83.755	Fundulus_heteroclitus
ENSGAFG00000021639	snrnp48	90	60.923	ENSGMOG00000018599	-	78	72.000	Gadus_morhua
ENSGAFG00000021639	snrnp48	77	51.119	ENSGALG00000013005	SNRNP48	68	58.537	Gallus_gallus
ENSGAFG00000021639	snrnp48	73	75.600	ENSGACG00000017756	-	76	76.378	Gasterosteus_aculeatus
ENSGAFG00000021639	snrnp48	81	47.973	ENSGAGG00000000865	SNRNP48	66	54.902	Gopherus_agassizii
ENSGAFG00000021639	snrnp48	81	44.109	ENSGGOG00000013220	SNRNP48	82	48.592	Gorilla_gorilla
ENSGAFG00000021639	snrnp48	94	74.766	ENSHBUG00000017066	snrnp48	94	74.540	Haplochromis_burtoni
ENSGAFG00000021639	snrnp48	80	46.690	ENSHGLG00000015241	SNRNP48	73	49.609	Heterocephalus_glaber_female
ENSGAFG00000021639	snrnp48	80	46.690	ENSHGLG00100010027	SNRNP48	73	49.609	Heterocephalus_glaber_male
ENSGAFG00000021639	snrnp48	74	72.047	ENSHCOG00000014066	snrnp48	94	63.804	Hippocampus_comes
ENSGAFG00000021639	snrnp48	81	43.807	ENSSTOG00000014635	SNRNP48	73	50.781	Ictidomys_tridecemlineatus
ENSGAFG00000021639	snrnp48	79	48.201	ENSJJAG00000011495	Snrnp48	72	50.607	Jaculus_jaculus
ENSGAFG00000021639	snrnp48	95	78.287	ENSKMAG00000016514	snrnp48	82	80.935	Kryptolebias_marmoratus
ENSGAFG00000021639	snrnp48	81	72.662	ENSLBEG00000026249	snrnp48	95	71.865	Labrus_bergylta
ENSGAFG00000021639	snrnp48	97	47.688	ENSLACG00000003958	SNRNP48	80	52.381	Latimeria_chalumnae
ENSGAFG00000021639	snrnp48	85	58.763	ENSLOCG00000004187	snrnp48	76	61.479	Lepisosteus_oculatus
ENSGAFG00000021639	snrnp48	71	50.195	ENSLAFG00000011152	SNRNP48	74	50.000	Loxodonta_africana
ENSGAFG00000021639	snrnp48	81	44.109	ENSMFAG00000045216	SNRNP48	82	48.592	Macaca_fascicularis
ENSGAFG00000021639	snrnp48	81	44.109	ENSMMUG00000014785	SNRNP48	82	48.592	Macaca_mulatta
ENSGAFG00000021639	snrnp48	81	44.411	ENSMNEG00000042269	SNRNP48	82	48.944	Macaca_nemestrina
ENSGAFG00000021639	snrnp48	81	44.109	ENSMLEG00000034004	SNRNP48	82	48.592	Mandrillus_leucophaeus
ENSGAFG00000021639	snrnp48	95	66.972	ENSMAMG00000018673	snrnp48	83	71.560	Mastacembelus_armatus
ENSGAFG00000021639	snrnp48	83	49.660	ENSMGAG00000006037	SNRNP48	78	54.936	Meleagris_gallopavo
ENSGAFG00000021639	snrnp48	97	42.566	ENSMAUG00000011944	Snrnp48	97	42.151	Mesocricetus_auratus
ENSGAFG00000021639	snrnp48	80	46.875	ENSMICG00000012497	SNRNP48	74	49.612	Microcebus_murinus
ENSGAFG00000021639	snrnp48	93	44.311	ENSMOCG00000015555	Snrnp48	84	47.535	Microtus_ochrogaster
ENSGAFG00000021639	snrnp48	56	78.646	ENSMMOG00000003072	-	61	78.646	Mola_mola
ENSGAFG00000021639	snrnp48	83	46.801	ENSMODG00000009996	SNRNP48	77	47.038	Monodelphis_domestica
ENSGAFG00000021639	snrnp48	96	70.732	ENSMALG00000005725	snrnp48	95	74.006	Monopterus_albus
ENSGAFG00000021639	snrnp48	94	43.529	MGP_CAROLIEiJ_G0018441	Snrnp48	95	41.964	Mus_caroli
ENSGAFG00000021639	snrnp48	94	43.529	ENSMUSG00000021431	Snrnp48	95	42.059	Mus_musculus
ENSGAFG00000021639	snrnp48	94	44.179	MGP_PahariEiJ_G0019509	Snrnp48	95	42.353	Mus_pahari
ENSGAFG00000021639	snrnp48	94	43.844	MGP_SPRETEiJ_G0019321	Snrnp48	95	41.471	Mus_spretus
ENSGAFG00000021639	snrnp48	93	45.536	ENSNGAG00000004849	Snrnp48	82	49.643	Nannospalax_galili
ENSGAFG00000021639	snrnp48	94	74.766	ENSNBRG00000012127	snrnp48	94	74.540	Neolamprologus_brichardi
ENSGAFG00000021639	snrnp48	81	44.109	ENSNLEG00000011667	SNRNP48	82	48.592	Nomascus_leucogenys
ENSGAFG00000021639	snrnp48	80	47.857	ENSOPRG00000015471	SNRNP48	77	51.613	Ochotona_princeps
ENSGAFG00000021639	snrnp48	94	75.389	ENSONIG00000001520	snrnp48	94	75.153	Oreochromis_niloticus
ENSGAFG00000021639	snrnp48	52	37.811	ENSOANG00000019888	-	96	38.308	Ornithorhynchus_anatinus
ENSGAFG00000021639	snrnp48	79	47.101	ENSOCUG00000005168	SNRNP48	83	49.609	Oryctolagus_cuniculus
ENSGAFG00000021639	snrnp48	87	74.497	ENSORLG00000015654	snrnp48	94	70.859	Oryzias_latipes
ENSGAFG00000021639	snrnp48	87	72.819	ENSORLG00020015976	snrnp48	80	72.393	Oryzias_latipes_hni
ENSGAFG00000021639	snrnp48	87	72.483	ENSORLG00015022379	snrnp48	80	69.939	Oryzias_latipes_hsok
ENSGAFG00000021639	snrnp48	94	73.832	ENSOMEG00000022007	snrnp48	94	71.779	Oryzias_melastigma
ENSGAFG00000021639	snrnp48	92	43.478	ENSOGAG00000005275	SNRNP48	95	43.478	Otolemur_garnettii
ENSGAFG00000021639	snrnp48	82	44.518	ENSOARG00000017319	SNRNP48	71	53.365	Ovis_aries
ENSGAFG00000021639	snrnp48	81	44.109	ENSPPAG00000032873	SNRNP48	82	48.592	Pan_paniscus
ENSGAFG00000021639	snrnp48	81	42.900	ENSPPRG00000004283	SNRNP48	73	49.609	Panthera_pardus
ENSGAFG00000021639	snrnp48	69	44.128	ENSPTIG00000013502	SNRNP48	81	49.573	Panthera_tigris_altaica
ENSGAFG00000021639	snrnp48	81	44.109	ENSPTRG00000017703	SNRNP48	82	48.592	Pan_troglodytes
ENSGAFG00000021639	snrnp48	81	44.109	ENSPANG00000000771	SNRNP48	82	48.592	Papio_anubis
ENSGAFG00000021639	snrnp48	90	56.325	ENSPKIG00000013703	snrnp48	57	62.921	Paramormyrops_kingsleyae
ENSGAFG00000021639	snrnp48	77	49.104	ENSPSIG00000002213	SNRNP48	64	57.005	Pelodiscus_sinensis
ENSGAFG00000021639	snrnp48	75	66.031	ENSPMGG00000008120	snrnp48	99	63.701	Periophthalmus_magnuspinnatus
ENSGAFG00000021639	snrnp48	94	44.745	ENSPEMG00000008872	Snrnp48	95	43.235	Peromyscus_maniculatus_bairdii
ENSGAFG00000021639	snrnp48	95	95.092	ENSPFOG00000003578	snrnp48	95	95.092	Poecilia_formosa
ENSGAFG00000021639	snrnp48	76	86.397	ENSPLAG00000002290	snrnp48	96	82.699	Poecilia_latipinna
ENSGAFG00000021639	snrnp48	95	95.706	ENSPMEG00000018033	snrnp48	95	95.706	Poecilia_mexicana
ENSGAFG00000021639	snrnp48	95	95.399	ENSPREG00000018541	snrnp48	95	95.399	Poecilia_reticulata
ENSGAFG00000021639	snrnp48	81	44.109	ENSPPYG00000016209	SNRNP48	82	48.592	Pongo_abelii
ENSGAFG00000021639	snrnp48	70	37.751	ENSPCAG00000011991	SNRNP48	97	38.314	Procavia_capensis
ENSGAFG00000021639	snrnp48	82	45.704	ENSPVAG00000002854	SNRNP48	75	47.893	Pteropus_vampyrus
ENSGAFG00000021639	snrnp48	92	74.684	ENSPNYG00000015399	snrnp48	89	75.899	Pundamilia_nyererei
ENSGAFG00000021639	snrnp48	93	43.658	ENSRNOG00000013756	Snrnp48	75	49.219	Rattus_norvegicus
ENSGAFG00000021639	snrnp48	80	48.084	ENSRBIG00000043856	SNRNP48	88	48.592	Rhinopithecus_bieti
ENSGAFG00000021639	snrnp48	81	44.109	ENSRROG00000043229	SNRNP48	82	48.592	Rhinopithecus_roxellana
ENSGAFG00000021639	snrnp48	81	44.411	ENSSBOG00000019486	SNRNP48	82	48.944	Saimiri_boliviensis_boliviensis
ENSGAFG00000021639	snrnp48	81	47.635	ENSSHAG00000014483	SNRNP48	80	48.410	Sarcophilus_harrisii
ENSGAFG00000021639	snrnp48	73	61.569	ENSSFOG00015006610	snrnp48	64	60.073	Scleropages_formosus
ENSGAFG00000021639	snrnp48	95	74.006	ENSSDUG00000014953	snrnp48	95	74.006	Seriola_dumerili
ENSGAFG00000021639	snrnp48	95	73.700	ENSSLDG00000005989	snrnp48	95	73.700	Seriola_lalandi_dorsalis
ENSGAFG00000021639	snrnp48	75	51.301	ENSSPUG00000006257	SNRNP48	60	54.930	Sphenodon_punctatus
ENSGAFG00000021639	snrnp48	96	74.618	ENSSPAG00000006454	snrnp48	95	75.153	Stegastes_partitus
ENSGAFG00000021639	snrnp48	78	49.643	ENSTGUG00000007575	SNRNP48	65	57.843	Taeniopygia_guttata
ENSGAFG00000021639	snrnp48	74	71.484	ENSTRUG00000007031	snrnp48	86	66.897	Takifugu_rubripes
ENSGAFG00000021639	snrnp48	98	64.583	ENSTNIG00000012977	-	85	67.616	Tetraodon_nigroviridis
ENSGAFG00000021639	snrnp48	73	48.828	ENSTBEG00000015620	SNRNP48	75	48.828	Tupaia_belangeri
ENSGAFG00000021639	snrnp48	85	42.900	ENSTTRG00000016715	SNRNP48	73	48.617	Tursiops_truncatus
ENSGAFG00000021639	snrnp48	93	43.068	ENSUAMG00000003690	SNRNP48	72	49.206	Ursus_americanus
ENSGAFG00000021639	snrnp48	68	49.580	ENSVPAG00000003557	SNRNP48	71	52.404	Vicugna_pacos
ENSGAFG00000021639	snrnp48	92	43.413	ENSVVUG00000004996	SNRNP48	72	48.617	Vulpes_vulpes
ENSGAFG00000021639	snrnp48	83	46.179	ENSXETG00000020447	snrnp48	75	50.388	Xenopus_tropicalis
ENSGAFG00000021639	snrnp48	95	86.503	ENSXCOG00000004478	snrnp48	95	86.503	Xiphophorus_couchianus
ENSGAFG00000021639	snrnp48	95	95.399	ENSXMAG00000013595	snrnp48	95	95.399	Xiphophorus_maculatus