EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000021645 (Gene tree)
Gene ID: -
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 20790 bases
Position: chrNHOQ01002390.1:8065166-8085955
Accession: ZDB-GENE-030131-9745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000032153	THUMP	PF02926.17	2.8e-11	1	1
ENSGAFP00000032149	THUMP	PF02926.17	3.3e-11	1	1
ENSGAFP00000032151	THUMP	PF02926.17	3.3e-11	1	1
ENSGAFP00000032153	UPF0020	PF01170.18	4.2e-39	1	1
ENSGAFP00000032149	UPF0020	PF01170.18	4.8e-39	1	1
ENSGAFP00000032151	UPF0020	PF01170.18	4.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000032480	-	4714	-	ENSGAFP00000032149	499 (aa)	-	-
ENSGAFT00000032482	-	4536	-	ENSGAFP00000032151	499 (aa)	-	-
ENSGAFT00000032484	-	1769	-	ENSGAFP00000032153	477 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000021645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000021645's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000021645	thumpd3	97	56.064	ENSG00000134077	THUMPD3	97	57.171	Homo_sapiens
ENSGAFG00000021645	thumpd3	98	85.010	ENSAPOG00000015836	thumpd3	99	85.010	Acanthochromis_polyacanthus
ENSGAFG00000021645	thumpd3	93	58.299	ENSAMEG00000011321	THUMPD3	94	58.642	Ailuropoda_melanoleuca
ENSGAFG00000021645	thumpd3	99	83.133	ENSACIG00000020096	thumpd3	99	83.333	Amphilophus_citrinellus
ENSGAFG00000021645	thumpd3	99	83.534	ENSAOCG00000004399	thumpd3	99	83.534	Amphiprion_ocellaris
ENSGAFG00000021645	thumpd3	99	83.936	ENSAPEG00000016740	thumpd3	99	83.936	Amphiprion_percula
ENSGAFG00000021645	thumpd3	99	80.723	ENSATEG00000005345	thumpd3	99	80.723	Anabas_testudineus
ENSGAFG00000021645	thumpd3	76	62.245	ENSAPLG00000003598	THUMPD3	99	62.850	Anas_platyrhynchos
ENSGAFG00000021645	thumpd3	94	58.743	ENSACAG00000014974	THUMPD3	98	58.743	Anolis_carolinensis
ENSGAFG00000021645	thumpd3	97	55.467	ENSANAG00000002365	THUMPD3	98	56.800	Aotus_nancymaae
ENSGAFG00000021645	thumpd3	99	81.928	ENSACLG00000023333	thumpd3	99	81.928	Astatotilapia_calliptera
ENSGAFG00000021645	thumpd3	83	57.246	ENSACLG00000013504	-	87	57.246	Astatotilapia_calliptera
ENSGAFG00000021645	thumpd3	93	70.851	ENSAMXG00000015683	thumpd3	98	71.678	Astyanax_mexicanus
ENSGAFG00000021645	thumpd3	95	58.800	ENSBTAG00000003112	THUMPD3	98	59.356	Bos_taurus
ENSGAFG00000021645	thumpd3	85	36.300	WBGene00010846	M04B2.2	96	37.037	Caenorhabditis_elegans
ENSGAFG00000021645	thumpd3	97	55.644	ENSCJAG00000015949	THUMPD3	98	56.972	Callithrix_jacchus
ENSGAFG00000021645	thumpd3	73	60.313	ENSCAFG00000008060	-	93	60.313	Canis_familiaris
ENSGAFG00000021645	thumpd3	94	59.470	ENSCAFG00000005499	THUMPD3	97	59.470	Canis_familiaris
ENSGAFG00000021645	thumpd3	78	61.029	ENSCAFG00020025887	-	94	61.029	Canis_lupus_dingo
ENSGAFG00000021645	thumpd3	94	59.470	ENSCAFG00020008895	-	97	59.470	Canis_lupus_dingo
ENSGAFG00000021645	thumpd3	97	57.905	ENSCHIG00000024037	THUMPD3	98	58.532	Capra_hircus
ENSGAFG00000021645	thumpd3	93	57.113	ENSTSYG00000000159	THUMPD3	94	57.407	Carlito_syrichta
ENSGAFG00000021645	thumpd3	85	40.603	ENSCAPG00000017486	THUMPD3	84	40.139	Cavia_aperea
ENSGAFG00000021645	thumpd3	90	59.236	ENSCPOG00000033287	THUMPD3	92	59.236	Cavia_porcellus
ENSGAFG00000021645	thumpd3	97	55.842	ENSCCAG00000027067	-	98	57.171	Cebus_capucinus
ENSGAFG00000021645	thumpd3	93	52.183	ENSCCAG00000021429	-	94	53.159	Cebus_capucinus
ENSGAFG00000021645	thumpd3	97	56.461	ENSCATG00000040999	THUMPD3	98	57.371	Cercocebus_atys
ENSGAFG00000021645	thumpd3	95	57.200	ENSCLAG00000000690	THUMPD3	98	57.200	Chinchilla_lanigera
ENSGAFG00000021645	thumpd3	50	30.612	ENSCSAG00000012431	THUMPD2	55	30.612	Chlorocebus_sabaeus
ENSGAFG00000021645	thumpd3	97	56.064	ENSCSAG00000010753	THUMPD3	98	56.972	Chlorocebus_sabaeus
ENSGAFG00000021645	thumpd3	76	51.477	ENSCHOG00000012851	THUMPD3	76	51.477	Choloepus_hoffmanni
ENSGAFG00000021645	thumpd3	90	60.504	ENSCPBG00000014771	THUMPD3	93	61.134	Chrysemys_picta_bellii
ENSGAFG00000021645	thumpd3	88	40.909	ENSCSAVG00000008668	-	97	41.766	Ciona_savignyi
ENSGAFG00000021645	thumpd3	97	55.666	ENSCANG00000031901	THUMPD3	98	56.574	Colobus_angolensis_palliatus
ENSGAFG00000021645	thumpd3	89	60.217	ENSCGRG00001024117	Thumpd3	91	60.000	Cricetulus_griseus_chok1gshd
ENSGAFG00000021645	thumpd3	89	60.217	ENSCGRG00000018116	Thumpd3	91	60.000	Cricetulus_griseus_crigri
ENSGAFG00000021645	thumpd3	94	78.252	ENSCSEG00000002546	thumpd3	99	75.453	Cynoglossus_semilaevis
ENSGAFG00000021645	thumpd3	99	86.318	ENSCVAG00000001019	thumpd3	98	86.318	Cyprinodon_variegatus
ENSGAFG00000021645	thumpd3	93	67.089	ENSDARG00000059634	thumpd3	98	67.089	Danio_rerio
ENSGAFG00000021645	thumpd3	93	57.557	ENSDNOG00000047668	THUMPD3	92	58.420	Dasypus_novemcinctus
ENSGAFG00000021645	thumpd3	90	59.657	ENSDORG00000003257	Thumpd3	93	60.086	Dipodomys_ordii
ENSGAFG00000021645	thumpd3	58	54.194	ENSETEG00000020239	-	60	55.484	Echinops_telfairi
ENSGAFG00000021645	thumpd3	86	52.715	ENSEBUG00000004221	thumpd3	97	52.715	Eptatretus_burgeri
ENSGAFG00000021645	thumpd3	97	56.016	ENSEASG00005013327	THUMPD3	99	56.917	Equus_asinus_asinus
ENSGAFG00000021645	thumpd3	97	57.988	ENSECAG00000002016	THUMPD3	99	58.893	Equus_caballus
ENSGAFG00000021645	thumpd3	95	52.209	ENSEEUG00000014696	THUMPD3	98	53.441	Erinaceus_europaeus
ENSGAFG00000021645	thumpd3	89	83.959	ENSELUG00000018246	thumpd3	87	79.114	Esox_lucius
ENSGAFG00000021645	thumpd3	94	58.776	ENSFCAG00000006171	THUMPD3	97	58.776	Felis_catus
ENSGAFG00000021645	thumpd3	83	59.361	ENSFALG00000013631	THUMPD3	91	59.589	Ficedula_albicollis
ENSGAFG00000021645	thumpd3	91	58.051	ENSFDAG00000014825	THUMPD3	92	59.362	Fukomys_damarensis
ENSGAFG00000021645	thumpd3	99	89.000	ENSFHEG00000006006	thumpd3	99	89.400	Fundulus_heteroclitus
ENSGAFG00000021645	thumpd3	97	68.737	ENSGMOG00000007923	thumpd3	98	68.737	Gadus_morhua
ENSGAFG00000021645	thumpd3	87	58.925	ENSGALG00000044813	THUMPD3	94	59.785	Gallus_gallus
ENSGAFG00000021645	thumpd3	94	79.701	ENSGACG00000000930	thumpd3	99	79.701	Gasterosteus_aculeatus
ENSGAFG00000021645	thumpd3	90	60.294	ENSGAGG00000022750	THUMPD3	93	61.134	Gopherus_agassizii
ENSGAFG00000021645	thumpd3	97	55.888	ENSGGOG00000000604	THUMPD3	97	57.000	Gorilla_gorilla
ENSGAFG00000021645	thumpd3	99	81.928	ENSHBUG00000013405	thumpd3	99	81.928	Haplochromis_burtoni
ENSGAFG00000021645	thumpd3	89	58.009	ENSHGLG00000016200	THUMPD3	91	59.477	Heterocephalus_glaber_female
ENSGAFG00000021645	thumpd3	89	58.225	ENSHGLG00100017321	-	91	59.091	Heterocephalus_glaber_male
ENSGAFG00000021645	thumpd3	87	52.349	ENSHGLG00100000505	-	92	52.349	Heterocephalus_glaber_male
ENSGAFG00000021645	thumpd3	93	77.419	ENSHCOG00000004871	thumpd3	97	77.682	Hippocampus_comes
ENSGAFG00000021645	thumpd3	92	70.435	ENSIPUG00000019415	THUMPD3	94	70.953	Ictalurus_punctatus
ENSGAFG00000021645	thumpd3	91	58.936	ENSSTOG00000003973	THUMPD3	93	58.936	Ictidomys_tridecemlineatus
ENSGAFG00000021645	thumpd3	92	53.474	ENSJJAG00000017751	Thumpd3	92	53.488	Jaculus_jaculus
ENSGAFG00000021645	thumpd3	99	81.288	ENSKMAG00000021025	thumpd3	94	81.288	Kryptolebias_marmoratus
ENSGAFG00000021645	thumpd3	99	81.526	ENSLBEG00000012252	thumpd3	99	81.526	Labrus_bergylta
ENSGAFG00000021645	thumpd3	95	57.143	ENSLACG00000018604	THUMPD3	98	56.574	Latimeria_chalumnae
ENSGAFG00000021645	thumpd3	92	62.725	ENSLOCG00000009800	thumpd3	94	65.659	Lepisosteus_oculatus
ENSGAFG00000021645	thumpd3	89	60.435	ENSLAFG00000005103	THUMPD3	91	60.435	Loxodonta_africana
ENSGAFG00000021645	thumpd3	94	56.967	ENSMFAG00000044884	THUMPD3	96	57.906	Macaca_fascicularis
ENSGAFG00000021645	thumpd3	94	56.967	ENSMMUG00000017307	THUMPD3	96	57.906	Macaca_mulatta
ENSGAFG00000021645	thumpd3	94	56.967	ENSMNEG00000030529	THUMPD3	96	57.906	Macaca_nemestrina
ENSGAFG00000021645	thumpd3	97	56.262	ENSMLEG00000032943	THUMPD3	98	57.171	Mandrillus_leucophaeus
ENSGAFG00000021645	thumpd3	94	81.277	ENSMAMG00000023934	thumpd3	99	78.514	Mastacembelus_armatus
ENSGAFG00000021645	thumpd3	99	81.928	ENSMZEG00005010623	thumpd3	99	81.928	Maylandia_zebra
ENSGAFG00000021645	thumpd3	78	61.139	ENSMGAG00000010182	THUMPD3	100	61.404	Meleagris_gallopavo
ENSGAFG00000021645	thumpd3	91	60.426	ENSMAUG00000012250	Thumpd3	92	60.426	Mesocricetus_auratus
ENSGAFG00000021645	thumpd3	93	55.221	ENSMICG00000010095	THUMPD3	95	55.823	Microcebus_murinus
ENSGAFG00000021645	thumpd3	88	60.613	ENSMOCG00000020148	Thumpd3	90	61.758	Microtus_ochrogaster
ENSGAFG00000021645	thumpd3	99	78.807	ENSMMOG00000021791	thumpd3	99	81.345	Mola_mola
ENSGAFG00000021645	thumpd3	96	55.138	ENSMODG00000004715	-	99	55.336	Monodelphis_domestica
ENSGAFG00000021645	thumpd3	95	81.780	ENSMALG00000017316	thumpd3	99	81.780	Monopterus_albus
ENSGAFG00000021645	thumpd3	53	57.143	MGP_CAROLIEiJ_G0028714	-	58	57.143	Mus_caroli
ENSGAFG00000021645	thumpd3	90	60.385	ENSMUSG00000030264	Thumpd3	92	60.385	Mus_musculus
ENSGAFG00000021645	thumpd3	90	60.171	MGP_PahariEiJ_G0022465	Thumpd3	92	60.171	Mus_pahari
ENSGAFG00000021645	thumpd3	90	60.385	MGP_SPRETEiJ_G0029742	Thumpd3	92	60.385	Mus_spretus
ENSGAFG00000021645	thumpd3	93	58.455	ENSMPUG00000017066	-	94	58.996	Mustela_putorius_furo
ENSGAFG00000021645	thumpd3	93	53.361	ENSMPUG00000005219	-	94	54.526	Mustela_putorius_furo
ENSGAFG00000021645	thumpd3	96	57.426	ENSMLUG00000008538	THUMPD3	98	57.594	Myotis_lucifugus
ENSGAFG00000021645	thumpd3	95	47.942	ENSNGAG00000001549	-	98	48.354	Nannospalax_galili
ENSGAFG00000021645	thumpd3	95	57.430	ENSNGAG00000021014	-	98	58.065	Nannospalax_galili
ENSGAFG00000021645	thumpd3	99	81.727	ENSNBRG00000004886	thumpd3	99	81.727	Neolamprologus_brichardi
ENSGAFG00000021645	thumpd3	97	56.262	ENSNLEG00000003863	THUMPD3	98	57.371	Nomascus_leucogenys
ENSGAFG00000021645	thumpd3	81	58.993	ENSMEUG00000009819	THUMPD3	99	58.993	Notamacropus_eugenii
ENSGAFG00000021645	thumpd3	81	59.905	ENSOPRG00000002020	THUMPD3	99	59.905	Ochotona_princeps
ENSGAFG00000021645	thumpd3	68	56.111	ENSODEG00000018242	THUMPD3	100	57.778	Octodon_degus
ENSGAFG00000021645	thumpd3	99	83.133	ENSONIG00000018977	thumpd3	99	83.133	Oreochromis_niloticus
ENSGAFG00000021645	thumpd3	79	56.145	ENSOANG00000014481	THUMPD3	97	57.729	Ornithorhynchus_anatinus
ENSGAFG00000021645	thumpd3	98	56.275	ENSOCUG00000010921	THUMPD3	96	57.171	Oryctolagus_cuniculus
ENSGAFG00000021645	thumpd3	99	77.778	ENSORLG00000000676	thumpd3	99	77.778	Oryzias_latipes
ENSGAFG00000021645	thumpd3	99	78.586	ENSORLG00020007509	thumpd3	99	78.586	Oryzias_latipes_hni
ENSGAFG00000021645	thumpd3	67	30.000	ENSORLG00020018792	thumpd2	80	30.286	Oryzias_latipes_hni
ENSGAFG00000021645	thumpd3	99	78.384	ENSORLG00015003615	thumpd3	99	78.384	Oryzias_latipes_hsok
ENSGAFG00000021645	thumpd3	99	77.526	ENSOMEG00000014115	thumpd3	99	77.938	Oryzias_melastigma
ENSGAFG00000021645	thumpd3	78	56.479	ENSOGAG00000017111	THUMPD3	99	57.702	Otolemur_garnettii
ENSGAFG00000021645	thumpd3	95	59.109	ENSOARG00000007139	THUMPD3	96	59.109	Ovis_aries
ENSGAFG00000021645	thumpd3	97	56.064	ENSPPAG00000025852	THUMPD3	97	57.171	Pan_paniscus
ENSGAFG00000021645	thumpd3	96	57.654	ENSPPRG00000008071	THUMPD3	99	57.654	Panthera_pardus
ENSGAFG00000021645	thumpd3	96	57.455	ENSPTIG00000017923	THUMPD3	99	57.455	Panthera_tigris_altaica
ENSGAFG00000021645	thumpd3	97	56.064	ENSPTRG00000014585	THUMPD3	97	57.171	Pan_troglodytes
ENSGAFG00000021645	thumpd3	97	55.865	ENSPANG00000016253	THUMPD3	98	56.773	Papio_anubis
ENSGAFG00000021645	thumpd3	91	68.602	ENSPKIG00000014009	thumpd3	94	69.130	Paramormyrops_kingsleyae
ENSGAFG00000021645	thumpd3	87	60.129	ENSPSIG00000007370	THUMPD3	90	60.262	Pelodiscus_sinensis
ENSGAFG00000021645	thumpd3	95	76.744	ENSPMGG00000017563	thumpd3	99	76.744	Periophthalmus_magnuspinnatus
ENSGAFG00000021645	thumpd3	88	61.099	ENSPEMG00000022411	Thumpd3	90	61.758	Peromyscus_maniculatus_bairdii
ENSGAFG00000021645	thumpd3	90	52.301	ENSPMAG00000001291	thumpd3	98	54.233	Petromyzon_marinus
ENSGAFG00000021645	thumpd3	96	56.016	ENSPCIG00000002049	THUMPD3	99	56.016	Phascolarctos_cinereus
ENSGAFG00000021645	thumpd3	100	95.400	ENSPFOG00000002318	thumpd3	100	95.400	Poecilia_formosa
ENSGAFG00000021645	thumpd3	100	95.400	ENSPLAG00000014804	thumpd3	100	95.400	Poecilia_latipinna
ENSGAFG00000021645	thumpd3	100	95.400	ENSPMEG00000000582	thumpd3	100	95.400	Poecilia_mexicana
ENSGAFG00000021645	thumpd3	100	95.808	ENSPREG00000009176	thumpd3	100	95.808	Poecilia_reticulata
ENSGAFG00000021645	thumpd3	88	44.619	ENSPPYG00000017616	-	90	44.619	Pongo_abelii
ENSGAFG00000021645	thumpd3	97	56.064	ENSPPYG00000029461	THUMPD3	98	57.171	Pongo_abelii
ENSGAFG00000021645	thumpd3	50	31.429	ENSPPYG00000012470	THUMPD2	55	31.429	Pongo_abelii
ENSGAFG00000021645	thumpd3	81	57.554	ENSPCAG00000015398	THUMPD3	99	58.753	Procavia_capensis
ENSGAFG00000021645	thumpd3	84	52.403	ENSPCOG00000023618	-	99	52.860	Propithecus_coquereli
ENSGAFG00000021645	thumpd3	97	49.109	ENSPCOG00000018095	-	99	50.493	Propithecus_coquereli
ENSGAFG00000021645	thumpd3	91	58.511	ENSPVAG00000008721	THUMPD3	93	59.062	Pteropus_vampyrus
ENSGAFG00000021645	thumpd3	99	81.928	ENSPNYG00000006918	thumpd3	99	81.928	Pundamilia_nyererei
ENSGAFG00000021645	thumpd3	93	70.108	ENSPNAG00000014936	thumpd3	96	70.108	Pygocentrus_nattereri
ENSGAFG00000021645	thumpd3	88	60.307	ENSRNOG00000006941	Thumpd3	90	60.307	Rattus_norvegicus
ENSGAFG00000021645	thumpd3	95	56.680	ENSRBIG00000035954	THUMPD3	98	57.606	Rhinopithecus_bieti
ENSGAFG00000021645	thumpd3	95	56.478	ENSRROG00000035734	THUMPD3	98	57.404	Rhinopithecus_roxellana
ENSGAFG00000021645	thumpd3	97	55.754	ENSSBOG00000023567	THUMPD3	99	58.246	Saimiri_boliviensis_boliviensis
ENSGAFG00000021645	thumpd3	90	57.143	ENSSHAG00000014467	THUMPD3	99	56.064	Sarcophilus_harrisii
ENSGAFG00000021645	thumpd3	90	70.199	ENSSFOG00015019210	thumpd3	92	70.199	Scleropages_formosus
ENSGAFG00000021645	thumpd3	99	80.561	ENSSMAG00000000609	thumpd3	97	82.869	Scophthalmus_maximus
ENSGAFG00000021645	thumpd3	99	82.129	ENSSDUG00000012179	thumpd3	99	83.857	Seriola_dumerili
ENSGAFG00000021645	thumpd3	99	82.329	ENSSLDG00000022028	thumpd3	99	82.329	Seriola_lalandi_dorsalis
ENSGAFG00000021645	thumpd3	78	65.839	ENSSARG00000002239	THUMPD3	80	65.839	Sorex_araneus
ENSGAFG00000021645	thumpd3	94	57.738	ENSSPUG00000017461	THUMPD3	98	58.167	Sphenodon_punctatus
ENSGAFG00000021645	thumpd3	99	82.897	ENSSPAG00000008345	thumpd3	98	83.099	Stegastes_partitus
ENSGAFG00000021645	thumpd3	93	59.138	ENSSSCG00000011542	THUMPD3	95	59.053	Sus_scrofa
ENSGAFG00000021645	thumpd3	87	61.111	ENSTGUG00000010440	THUMPD3	100	61.556	Taeniopygia_guttata
ENSGAFG00000021645	thumpd3	95	71.398	ENSTRUG00000004420	thumpd3	97	72.052	Takifugu_rubripes
ENSGAFG00000021645	thumpd3	94	78.587	ENSTNIG00000014627	thumpd3	100	81.099	Tetraodon_nigroviridis
ENSGAFG00000021645	thumpd3	97	53.438	ENSTBEG00000003450	THUMPD3	98	54.059	Tupaia_belangeri
ENSGAFG00000021645	thumpd3	91	59.034	ENSTTRG00000009694	THUMPD3	91	59.660	Tursiops_truncatus
ENSGAFG00000021645	thumpd3	97	57.087	ENSUAMG00000009412	THUMPD3	99	57.738	Ursus_americanus
ENSGAFG00000021645	thumpd3	97	60.707	ENSUMAG00000019241	THUMPD3	99	60.707	Ursus_maritimus
ENSGAFG00000021645	thumpd3	75	57.538	ENSVPAG00000002855	THUMPD3	94	58.838	Vicugna_pacos
ENSGAFG00000021645	thumpd3	94	58.130	ENSVVUG00000025278	THUMPD3	97	59.267	Vulpes_vulpes
ENSGAFG00000021645	thumpd3	87	59.956	ENSXETG00000001447	thumpd3	89	59.737	Xenopus_tropicalis
ENSGAFG00000021645	thumpd3	98	97.541	ENSXCOG00000000159	thumpd3	99	97.679	Xiphophorus_couchianus
ENSGAFG00000021645	thumpd3	100	96.800	ENSXMAG00000001423	thumpd3	100	96.800	Xiphophorus_maculatus