EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000021760 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 23362 bases
Position: chrNHOQ01002390.1:9263019-9286380
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000032304	zf-met	PF12874.7	5.1e-24	1	3
ENSGAFP00000032304	zf-met	PF12874.7	5.1e-24	2	3
ENSGAFP00000032304	zf-met	PF12874.7	5.1e-24	3	3
ENSGAFP00000032303	zf-met	PF12874.7	5.7e-24	1	3
ENSGAFP00000032303	zf-met	PF12874.7	5.7e-24	2	3
ENSGAFP00000032303	zf-met	PF12874.7	5.7e-24	3	3
ENSGAFP00000032304	zf-C2H2_jaz	PF12171.8	6.2e-17	1	1
ENSGAFP00000032303	zf-C2H2_jaz	PF12171.8	7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000032634	-	3460	-	ENSGAFP00000032303	390 (aa)	-	-
ENSGAFT00000032635	-	1125	-	ENSGAFP00000032304	374 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000021760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000021760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000021760	-	98	36.092	ENSGAFG00000003621	-	95	36.429
ENSGAFG00000021760	-	78	67.692	ENSGAFG00000021154	znf385b	77	49.333
ENSGAFG00000021760	-	97	39.753	ENSGAFG00000011657	ZNF385D	82	39.950
ENSGAFG00000021760	-	94	66.491	ENSGAFG00000010277	znf385a	90	71.637
ENSGAFG00000021760	-	100	42.788	ENSGAFG00000007871	znf385d	100	43.380
ENSGAFG00000021760	-	100	38.085	ENSGAFG00000001005	znf385c	66	53.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000021760	-	100	57.960	ENSG00000161642	ZNF385A	98	69.149	Homo_sapiens
ENSGAFG00000021760	-	100	84.091	ENSAPOG00000014982	-	100	87.374	Acanthochromis_polyacanthus
ENSGAFG00000021760	-	100	64.858	ENSAPOG00000004652	znf385a	94	63.934	Acanthochromis_polyacanthus
ENSGAFG00000021760	-	80	59.105	ENSAMEG00000000767	ZNF385A	85	62.290	Ailuropoda_melanoleuca
ENSGAFG00000021760	-	99	88.189	ENSACIG00000001246	ZNF385A	96	88.714	Amphilophus_citrinellus
ENSGAFG00000021760	-	94	65.957	ENSACIG00000022862	znf385a	100	65.957	Amphilophus_citrinellus
ENSGAFG00000021760	-	100	78.061	ENSAOCG00000007207	-	99	79.592	Amphiprion_ocellaris
ENSGAFG00000021760	-	100	64.858	ENSAOCG00000021210	znf385a	96	61.619	Amphiprion_ocellaris
ENSGAFG00000021760	-	100	71.930	ENSAPEG00000015869	-	99	74.939	Amphiprion_percula
ENSGAFG00000021760	-	100	62.264	ENSAPEG00000002080	znf385a	70	81.675	Amphiprion_percula
ENSGAFG00000021760	-	95	87.709	ENSATEG00000001575	ZNF385A	100	87.606	Anabas_testudineus
ENSGAFG00000021760	-	83	81.643	ENSATEG00000021954	znf385a	94	65.632	Anabas_testudineus
ENSGAFG00000021760	-	94	58.312	ENSACAG00000007594	ZNF385A	69	77.612	Anolis_carolinensis
ENSGAFG00000021760	-	100	57.711	ENSANAG00000001893	ZNF385A	91	68.085	Aotus_nancymaae
ENSGAFG00000021760	-	100	86.216	ENSACLG00000000111	-	94	86.717	Astatotilapia_calliptera
ENSGAFG00000021760	-	93	73.729	ENSACLG00000005163	znf385a	72	80.693	Astatotilapia_calliptera
ENSGAFG00000021760	-	100	66.586	ENSAMXG00000013078	znf385a	98	64.908	Astyanax_mexicanus
ENSGAFG00000021760	-	97	61.598	ENSBTAG00000015604	ZNF385A	97	62.751	Bos_taurus
ENSGAFG00000021760	-	100	57.960	ENSCJAG00000018897	ZNF385A	91	69.149	Callithrix_jacchus
ENSGAFG00000021760	-	100	56.543	ENSCAFG00000029158	ZNF385A	97	59.173	Canis_familiaris
ENSGAFG00000021760	-	97	60.836	ENSCAFG00020020566	ZNF385A	97	60.638	Canis_lupus_dingo
ENSGAFG00000021760	-	97	61.082	ENSCHIG00000016468	ZNF385A	99	61.640	Capra_hircus
ENSGAFG00000021760	-	98	46.447	ENSTSYG00000029148	ZNF385A	94	48.087	Carlito_syrichta
ENSGAFG00000021760	-	97	60.358	ENSCPOG00000023870	ZNF385A	97	58.333	Cavia_porcellus
ENSGAFG00000021760	-	100	57.711	ENSCCAG00000033332	ZNF385A	100	60.745	Cebus_capucinus
ENSGAFG00000021760	-	100	59.453	ENSCATG00000035239	ZNF385A	91	68.085	Cercocebus_atys
ENSGAFG00000021760	-	100	58.458	ENSCLAG00000012440	ZNF385A	97	59.173	Chinchilla_lanigera
ENSGAFG00000021760	-	100	57.711	ENSCSAG00000005407	ZNF385A	97	59.690	Chlorocebus_sabaeus
ENSGAFG00000021760	-	100	56.075	ENSCPBG00000022312	ZNF385A	100	58.612	Chrysemys_picta_bellii
ENSGAFG00000021760	-	100	59.453	ENSCANG00000023978	ZNF385A	91	68.085	Colobus_angolensis_palliatus
ENSGAFG00000021760	-	97	60.567	ENSCGRG00001015539	Zfp385a	93	56.468	Cricetulus_griseus_chok1gshd
ENSGAFG00000021760	-	97	59.536	ENSCGRG00000009785	Zfp385a	93	56.468	Cricetulus_griseus_crigri
ENSGAFG00000021760	-	100	63.134	ENSCSEG00000006909	znf385a	94	63.723	Cynoglossus_semilaevis
ENSGAFG00000021760	-	100	77.468	ENSCSEG00000003390	ZNF385A	94	79.747	Cynoglossus_semilaevis
ENSGAFG00000021760	-	100	92.051	ENSCVAG00000001330	-	94	92.051	Cyprinodon_variegatus
ENSGAFG00000021760	-	98	79.327	ENSCVAG00000000567	znf385a	83	82.266	Cyprinodon_variegatus
ENSGAFG00000021760	-	100	68.059	ENSDARG00000009899	znf385a	94	66.748	Danio_rerio
ENSGAFG00000021760	-	83	58.204	ENSDNOG00000048978	ZNF385A	77	80.000	Dasypus_novemcinctus
ENSGAFG00000021760	-	97	60.567	ENSDORG00000027646	Zfp385a	97	59.690	Dipodomys_ordii
ENSGAFG00000021760	-	94	58.730	ENSEASG00005010244	ZNF385A	77	61.032	Equus_asinus_asinus
ENSGAFG00000021760	-	97	61.340	ENSECAG00000024939	ZNF385A	97	59.948	Equus_caballus
ENSGAFG00000021760	-	94	83.568	ENSELUG00000015545	ZNF385A	85	85.149	Esox_lucius
ENSGAFG00000021760	-	100	63.915	ENSELUG00000009176	znf385a	100	63.876	Esox_lucius
ENSGAFG00000021760	-	97	61.340	ENSFCAG00000010154	ZNF385A	91	70.213	Felis_catus
ENSGAFG00000021760	-	100	57.711	ENSFDAG00000002958	ZNF385A	98	59.173	Fukomys_damarensis
ENSGAFG00000021760	-	100	93.333	ENSFHEG00000013396	-	100	93.333	Fundulus_heteroclitus
ENSGAFG00000021760	-	100	61.927	ENSFHEG00000023419	znf385a	94	63.805	Fundulus_heteroclitus
ENSGAFG00000021760	-	64	79.839	ENSGMOG00000015026	-	71	79.839	Gadus_morhua
ENSGAFG00000021760	-	66	55.777	ENSGALG00000046448	ZNF385A	88	52.921	Gallus_gallus
ENSGAFG00000021760	-	99	64.691	ENSGACG00000008964	znf385a	99	64.691	Gasterosteus_aculeatus
ENSGAFG00000021760	-	99	80.506	ENSGACG00000000703	ZNF385A	100	79.198	Gasterosteus_aculeatus
ENSGAFG00000021760	-	72	56.536	ENSGAGG00000001845	ZNF385A	62	74.877	Gopherus_agassizii
ENSGAFG00000021760	-	99	58.250	ENSGGOG00000002658	ZNF385A	91	68.085	Gorilla_gorilla
ENSGAFG00000021760	-	100	64.000	ENSHBUG00000004041	znf385a	75	80.693	Haplochromis_burtoni
ENSGAFG00000021760	-	100	85.965	ENSHBUG00000014839	-	94	86.466	Haplochromis_burtoni
ENSGAFG00000021760	-	100	57.248	ENSHGLG00000001612	ZNF385A	97	58.883	Heterocephalus_glaber_female
ENSGAFG00000021760	-	94	84.594	ENSHCOG00000003171	ZNF385A	99	84.594	Hippocampus_comes
ENSGAFG00000021760	-	100	65.385	ENSHCOG00000003599	znf385a	96	62.648	Hippocampus_comes
ENSGAFG00000021760	-	100	65.375	ENSIPUG00000008834	znf385a	81	81.910	Ictalurus_punctatus
ENSGAFG00000021760	-	100	57.778	ENSSTOG00000023730	ZNF385A	97	58.915	Ictidomys_tridecemlineatus
ENSGAFG00000021760	-	97	61.856	ENSJJAG00000021761	Zfp385a	93	57.463	Jaculus_jaculus
ENSGAFG00000021760	-	83	79.327	ENSKMAG00000004707	znf385a	94	64.554	Kryptolebias_marmoratus
ENSGAFG00000021760	-	100	83.461	ENSKMAG00000018980	ZNF385A	93	82.952	Kryptolebias_marmoratus
ENSGAFG00000021760	-	100	82.908	ENSLBEG00000019687	ZNF385A	94	84.184	Labrus_bergylta
ENSGAFG00000021760	-	93	74.477	ENSLBEG00000007732	znf385a	94	62.731	Labrus_bergylta
ENSGAFG00000021760	-	94	54.079	ENSLACG00000003097	ZNF385A	97	72.464	Latimeria_chalumnae
ENSGAFG00000021760	-	100	64.608	ENSLOCG00000007204	znf385a	73	82.353	Lepisosteus_oculatus
ENSGAFG00000021760	-	82	58.125	ENSLAFG00000001583	ZNF385A	96	60.912	Loxodonta_africana
ENSGAFG00000021760	-	100	59.453	ENSMFAG00000042192	ZNF385A	91	68.085	Macaca_fascicularis
ENSGAFG00000021760	-	100	59.102	ENSMMUG00000016669	ZNF385A	91	68.085	Macaca_mulatta
ENSGAFG00000021760	-	100	59.102	ENSMNEG00000039249	ZNF385A	91	68.085	Macaca_nemestrina
ENSGAFG00000021760	-	100	59.453	ENSMLEG00000026475	ZNF385A	91	68.085	Mandrillus_leucophaeus
ENSGAFG00000021760	-	99	85.942	ENSMAMG00000002158	ZNF385A	99	85.904	Mastacembelus_armatus
ENSGAFG00000021760	-	94	69.041	ENSMAMG00000006256	znf385a	96	67.742	Mastacembelus_armatus
ENSGAFG00000021760	-	100	64.000	ENSMZEG00005027220	znf385a	75	80.693	Maylandia_zebra
ENSGAFG00000021760	-	100	86.216	ENSMZEG00005008223	-	94	86.717	Maylandia_zebra
ENSGAFG00000021760	-	99	59.250	ENSMAUG00000015687	Zfp385a	100	58.647	Mesocricetus_auratus
ENSGAFG00000021760	-	99	59.900	ENSMICG00000037401	ZNF385A	96	72.727	Microcebus_murinus
ENSGAFG00000021760	-	100	57.711	ENSMOCG00000006959	Zfp385a	97	59.690	Microtus_ochrogaster
ENSGAFG00000021760	-	99	83.065	ENSMMOG00000021851	-	99	84.677	Mola_mola
ENSGAFG00000021760	-	100	65.952	ENSMMOG00000006777	znf385a	92	63.294	Mola_mola
ENSGAFG00000021760	-	100	83.081	ENSMALG00000014904	-	99	79.949	Monopterus_albus
ENSGAFG00000021760	-	88	71.802	ENSMALG00000015531	znf385a	91	70.640	Monopterus_albus
ENSGAFG00000021760	-	97	60.614	MGP_CAROLIEiJ_G0020377	Zfp385a	97	59.948	Mus_caroli
ENSGAFG00000021760	-	97	60.614	ENSMUSG00000000552	Zfp385a	99	60.317	Mus_musculus
ENSGAFG00000021760	-	97	60.614	MGP_PahariEiJ_G0020376	Zfp385a	97	59.948	Mus_pahari
ENSGAFG00000021760	-	97	60.614	MGP_SPRETEiJ_G0021270	Zfp385a	97	59.948	Mus_spretus
ENSGAFG00000021760	-	100	58.706	ENSMPUG00000005716	ZNF385A	97	60.724	Mustela_putorius_furo
ENSGAFG00000021760	-	100	56.824	ENSMLUG00000012937	ZNF385A	90	59.690	Myotis_lucifugus
ENSGAFG00000021760	-	97	60.825	ENSNGAG00000007963	Zfp385a	97	57.828	Nannospalax_galili
ENSGAFG00000021760	-	100	82.630	ENSNBRG00000016449	-	97	80.241	Neolamprologus_brichardi
ENSGAFG00000021760	-	97	57.841	ENSNLEG00000017645	ZNF385A	91	68.085	Nomascus_leucogenys
ENSGAFG00000021760	-	100	57.740	ENSMEUG00000010656	ZNF385A	99	60.847	Notamacropus_eugenii
ENSGAFG00000021760	-	70	48.561	ENSOPRG00000015687	ZNF385A	99	50.579	Ochotona_princeps
ENSGAFG00000021760	-	100	58.168	ENSODEG00000013971	ZNF385A	97	58.915	Octodon_degus
ENSGAFG00000021760	-	100	86.284	ENSONIG00000019097	-	93	86.534	Oreochromis_niloticus
ENSGAFG00000021760	-	86	79.167	ENSONIG00000012107	znf385a	72	81.188	Oreochromis_niloticus
ENSGAFG00000021760	-	84	55.848	ENSOCUG00000010747	ZNF385A	99	59.744	Oryctolagus_cuniculus
ENSGAFG00000021760	-	100	63.658	ENSORLG00000007485	znf385a	100	81.281	Oryzias_latipes
ENSGAFG00000021760	-	99	81.365	ENSORLG00000028647	-	100	82.011	Oryzias_latipes
ENSGAFG00000021760	-	100	63.895	ENSORLG00020008132	znf385a	100	81.281	Oryzias_latipes_hni
ENSGAFG00000021760	-	96	78.684	ENSORLG00020004802	-	92	82.371	Oryzias_latipes_hni
ENSGAFG00000021760	-	100	63.658	ENSORLG00015001095	znf385a	100	81.281	Oryzias_latipes_hsok
ENSGAFG00000021760	-	100	63.146	ENSOMEG00000017817	znf385a	93	64.286	Oryzias_melastigma
ENSGAFG00000021760	-	100	79.949	ENSOMEG00000009018	-	100	74.580	Oryzias_melastigma
ENSGAFG00000021760	-	97	61.183	ENSOGAG00000009483	ZNF385A	90	61.282	Otolemur_garnettii
ENSGAFG00000021760	-	85	57.101	ENSOARG00000016195	ZNF385A	87	61.538	Ovis_aries
ENSGAFG00000021760	-	100	57.711	ENSPPAG00000035416	ZNF385A	91	68.085	Pan_paniscus
ENSGAFG00000021760	-	97	61.340	ENSPPRG00000007378	ZNF385A	91	70.213	Panthera_pardus
ENSGAFG00000021760	-	74	55.709	ENSPTIG00000018804	ZNF385A	96	58.974	Panthera_tigris_altaica
ENSGAFG00000021760	-	100	57.711	ENSPTRG00000005039	ZNF385A	91	68.085	Pan_troglodytes
ENSGAFG00000021760	-	100	59.204	ENSPANG00000020165	ZNF385A	91	68.085	Papio_anubis
ENSGAFG00000021760	-	100	53.985	ENSPKIG00000009611	-	81	71.574	Paramormyrops_kingsleyae
ENSGAFG00000021760	-	100	67.554	ENSPKIG00000008396	ZNF385A	94	68.059	Paramormyrops_kingsleyae
ENSGAFG00000021760	-	100	57.320	ENSPEMG00000018499	Zfp385a	93	56.468	Peromyscus_maniculatus_bairdii
ENSGAFG00000021760	-	100	58.458	ENSPCIG00000006724	ZNF385A	97	53.543	Phascolarctos_cinereus
ENSGAFG00000021760	-	100	64.352	ENSPFOG00000008692	znf385a	72	81.683	Poecilia_formosa
ENSGAFG00000021760	-	100	95.128	ENSPFOG00000010923	ZNF385A	93	95.128	Poecilia_formosa
ENSGAFG00000021760	-	100	63.741	ENSPLAG00000020210	znf385a	98	67.018	Poecilia_latipinna
ENSGAFG00000021760	-	100	90.863	ENSPLAG00000008059	ZNF385A	100	85.185	Poecilia_latipinna
ENSGAFG00000021760	-	94	71.046	ENSPMEG00000010287	znf385a	97	70.190	Poecilia_mexicana
ENSGAFG00000021760	-	100	95.128	ENSPMEG00000002522	ZNF385A	93	95.128	Poecilia_mexicana
ENSGAFG00000021760	-	100	64.706	ENSPREG00000021375	znf385a	100	61.111	Poecilia_reticulata
ENSGAFG00000021760	-	100	94.359	ENSPREG00000016834	ZNF385A	93	92.564	Poecilia_reticulata
ENSGAFG00000021760	-	100	57.711	ENSPPYG00000004603	ZNF385A	97	59.690	Pongo_abelii
ENSGAFG00000021760	-	94	57.825	ENSPCAG00000000899	ZNF385A	100	61.318	Procavia_capensis
ENSGAFG00000021760	-	97	61.082	ENSPCOG00000014689	ZNF385A	96	72.727	Propithecus_coquereli
ENSGAFG00000021760	-	56	64.815	ENSPVAG00000000328	ZNF385A	55	70.833	Pteropus_vampyrus
ENSGAFG00000021760	-	100	79.337	ENSPNYG00000001377	ZNF385A	100	86.236	Pundamilia_nyererei
ENSGAFG00000021760	-	99	59.406	ENSPNYG00000020147	znf385a	75	80.198	Pundamilia_nyererei
ENSGAFG00000021760	-	100	68.812	ENSPNAG00000023612	znf385a	97	61.968	Pygocentrus_nattereri
ENSGAFG00000021760	-	65	52.157	ENSPNAG00000013499	-	61	56.373	Pygocentrus_nattereri
ENSGAFG00000021760	-	97	60.614	ENSRNOG00000036833	Zfp385a	99	60.317	Rattus_norvegicus
ENSGAFG00000021760	-	100	59.352	ENSRBIG00000040535	ZNF385A	91	68.085	Rhinopithecus_bieti
ENSGAFG00000021760	-	100	59.352	ENSRROG00000027319	ZNF385A	91	68.085	Rhinopithecus_roxellana
ENSGAFG00000021760	-	100	57.711	ENSSBOG00000030395	ZNF385A	91	68.085	Saimiri_boliviensis_boliviensis
ENSGAFG00000021760	-	100	63.702	ENSSFOG00015004236	znf385a	71	64.010	Scleropages_formosus
ENSGAFG00000021760	-	100	67.482	ENSSFOG00015014548	znf385a	94	68.889	Scleropages_formosus
ENSGAFG00000021760	-	89	90.598	ENSSMAG00000002386	-	94	79.376	Scophthalmus_maximus
ENSGAFG00000021760	-	83	81.818	ENSSMAG00000002432	znf385a	94	65.133	Scophthalmus_maximus
ENSGAFG00000021760	-	100	84.518	ENSSDUG00000006973	-	100	85.533	Seriola_dumerili
ENSGAFG00000021760	-	100	62.887	ENSSDUG00000012278	znf385a	100	61.499	Seriola_dumerili
ENSGAFG00000021760	-	100	71.392	ENSSLDG00000006334	znf385a	100	70.543	Seriola_lalandi_dorsalis
ENSGAFG00000021760	-	100	84.518	ENSSLDG00000000605	-	94	85.533	Seriola_lalandi_dorsalis
ENSGAFG00000021760	-	65	64.516	ENSSPUG00000010212	ZNF385A	99	65.196	Sphenodon_punctatus
ENSGAFG00000021760	-	100	84.343	ENSSPAG00000002733	-	95	89.458	Stegastes_partitus
ENSGAFG00000021760	-	100	64.706	ENSSPAG00000006930	znf385a	99	61.039	Stegastes_partitus
ENSGAFG00000021760	-	97	60.668	ENSSSCG00000000292	ZNF385A	87	53.509	Sus_scrofa
ENSGAFG00000021760	-	100	81.566	ENSTRUG00000013619	ZNF385A	100	82.323	Takifugu_rubripes
ENSGAFG00000021760	-	100	66.501	ENSTRUG00000013160	znf385a	98	66.089	Takifugu_rubripes
ENSGAFG00000021760	-	99	78.086	ENSTNIG00000014580	ZNF385A	99	78.841	Tetraodon_nigroviridis
ENSGAFG00000021760	-	67	85.246	ENSTTRG00000001650	ZNF385A	74	85.246	Tursiops_truncatus
ENSGAFG00000021760	-	100	58.313	ENSUAMG00000021970	ZNF385A	99	61.680	Ursus_americanus
ENSGAFG00000021760	-	64	56.349	ENSUMAG00000010548	ZNF385A	89	60.538	Ursus_maritimus
ENSGAFG00000021760	-	82	58.125	ENSVVUG00000024384	ZNF385A	98	58.446	Vulpes_vulpes
ENSGAFG00000021760	-	94	53.704	ENSXETG00000021272	znf385a	100	59.302	Xenopus_tropicalis
ENSGAFG00000021760	-	84	66.767	ENSXCOG00000001430	znf385a	100	66.667	Xiphophorus_couchianus
ENSGAFG00000021760	-	100	89.924	ENSXCOG00000019652	-	100	90.428	Xiphophorus_couchianus
ENSGAFG00000021760	-	100	97.179	ENSXMAG00000026210	-	94	97.179	Xiphophorus_maculatus
ENSGAFG00000021760	-	100	63.357	ENSXMAG00000028272	znf385a	94	70.085	Xiphophorus_maculatus