EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000000132 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 10518 bases
Position: chrPPEB01005910.1:87762-98279
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000000159	PseudoU_synth_2	PF00849.22	2.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000000182	RPUSD4-201	1492	-	ENSGAGP00000000159	360 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000000132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000000132's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000000132	RPUSD4	52	31.937	ENSGAGG00000007493	RPUSD3	81	33.942

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000000132	RPUSD4	89	66.355	ENSG00000165526	RPUSD4	89	64.583	Homo_sapiens
ENSGAGG00000000132	RPUSD4	96	49.573	ENSAPOG00000011024	rpusd4	88	49.573	Acanthochromis_polyacanthus
ENSGAGG00000000132	RPUSD4	82	63.830	ENSAMEG00000005953	-	93	63.830	Ailuropoda_melanoleuca
ENSGAGG00000000132	RPUSD4	93	63.393	ENSAMEG00000000127	-	89	63.393	Ailuropoda_melanoleuca
ENSGAGG00000000132	RPUSD4	90	51.220	ENSACIG00000003533	rpusd4	96	51.220	Amphilophus_citrinellus
ENSGAGG00000000132	RPUSD4	96	49.143	ENSAOCG00000015409	rpusd4	87	49.143	Amphiprion_ocellaris
ENSGAGG00000000132	RPUSD4	96	49.714	ENSAPEG00000018935	rpusd4	87	49.714	Amphiprion_percula
ENSGAGG00000000132	RPUSD4	89	52.632	ENSATEG00000008059	rpusd4	80	52.632	Anabas_testudineus
ENSGAGG00000000132	RPUSD4	78	74.552	ENSAPLG00000013250	RPUSD4	99	72.881	Anas_platyrhynchos
ENSGAGG00000000132	RPUSD4	97	71.671	ENSACAG00000000189	RPUSD4	94	71.671	Anolis_carolinensis
ENSGAGG00000000132	RPUSD4	93	62.500	ENSANAG00000024050	RPUSD4	90	62.500	Aotus_nancymaae
ENSGAGG00000000132	RPUSD4	95	51.862	ENSACLG00000020996	rpusd4	89	51.862	Astatotilapia_calliptera
ENSGAGG00000000132	RPUSD4	95	51.412	ENSAMXG00000031479	rpusd4	98	51.437	Astyanax_mexicanus
ENSGAGG00000000132	RPUSD4	97	61.017	ENSBTAG00000020900	RPUSD4	94	60.845	Bos_taurus
ENSGAGG00000000132	RPUSD4	93	63.393	ENSCJAG00000042850	RPUSD4	84	63.393	Callithrix_jacchus
ENSGAGG00000000132	RPUSD4	93	63.393	ENSCAFG00000010488	RPUSD4	88	63.988	Canis_familiaris
ENSGAGG00000000132	RPUSD4	93	63.393	ENSCAFG00020010621	RPUSD4	88	63.988	Canis_lupus_dingo
ENSGAGG00000000132	RPUSD4	89	63.043	ENSCHIG00000009975	RPUSD4	96	59.178	Capra_hircus
ENSGAGG00000000132	RPUSD4	99	62.983	ENSTSYG00000008456	RPUSD4	96	62.983	Carlito_syrichta
ENSGAGG00000000132	RPUSD4	69	60.643	ENSCAPG00000006040	RPUSD4	96	60.643	Cavia_aperea
ENSGAGG00000000132	RPUSD4	94	62.018	ENSCPOG00000014971	RPUSD4	89	62.018	Cavia_porcellus
ENSGAGG00000000132	RPUSD4	97	61.236	ENSCCAG00000027838	RPUSD4	95	61.236	Cebus_capucinus
ENSGAGG00000000132	RPUSD4	97	61.127	ENSCATG00000041570	RPUSD4	94	61.127	Cercocebus_atys
ENSGAGG00000000132	RPUSD4	98	62.254	ENSCLAG00000016553	RPUSD4	94	62.254	Chinchilla_lanigera
ENSGAGG00000000132	RPUSD4	93	63.690	ENSCSAG00000002274	RPUSD4	89	63.690	Chlorocebus_sabaeus
ENSGAGG00000000132	RPUSD4	75	68.401	ENSCHOG00000010249	RPUSD4	94	68.401	Choloepus_hoffmanni
ENSGAGG00000000132	RPUSD4	81	92.414	ENSCPBG00000011175	RPUSD4	100	92.414	Chrysemys_picta_bellii
ENSGAGG00000000132	RPUSD4	75	41.007	ENSCSAVG00000000872	-	54	41.007	Ciona_savignyi
ENSGAGG00000000132	RPUSD4	98	60.784	ENSCANG00000039684	RPUSD4	94	60.784	Colobus_angolensis_palliatus
ENSGAGG00000000132	RPUSD4	98	61.003	ENSCGRG00001024141	Rpusd4	95	61.003	Cricetulus_griseus_chok1gshd
ENSGAGG00000000132	RPUSD4	98	61.003	ENSCGRG00000014415	Rpusd4	95	61.003	Cricetulus_griseus_crigri
ENSGAGG00000000132	RPUSD4	52	43.455	ENSCSEG00000006462	-	84	43.455	Cynoglossus_semilaevis
ENSGAGG00000000132	RPUSD4	89	54.740	ENSCVAG00000008761	rpusd4	90	52.247	Cyprinodon_variegatus
ENSGAGG00000000132	RPUSD4	89	55.046	ENSCVAG00000000392	rpusd4	92	55.046	Cyprinodon_variegatus
ENSGAGG00000000132	RPUSD4	94	48.406	ENSDARG00000012674	rpusd4	96	48.696	Danio_rerio
ENSGAGG00000000132	RPUSD4	98	64.507	ENSDNOG00000020026	RPUSD4	94	64.507	Dasypus_novemcinctus
ENSGAGG00000000132	RPUSD4	93	63.393	ENSDORG00000016717	Rpusd4	89	63.393	Dipodomys_ordii
ENSGAGG00000000132	RPUSD4	96	62.248	ENSETEG00000013953	RPUSD4	92	62.248	Echinops_telfairi
ENSGAGG00000000132	RPUSD4	96	60.519	ENSEASG00005022982	RPUSD4	92	60.519	Equus_asinus_asinus
ENSGAGG00000000132	RPUSD4	96	60.458	ENSECAG00000000557	RPUSD4	92	60.458	Equus_caballus
ENSGAGG00000000132	RPUSD4	79	62.360	ENSEEUG00000014036	RPUSD4	76	62.360	Erinaceus_europaeus
ENSGAGG00000000132	RPUSD4	89	55.120	ENSELUG00000008075	rpusd4	87	55.120	Esox_lucius
ENSGAGG00000000132	RPUSD4	98	61.345	ENSFCAG00000029789	RPUSD4	88	64.970	Felis_catus
ENSGAGG00000000132	RPUSD4	93	70.796	ENSFALG00000005171	RPUSD4	99	70.796	Ficedula_albicollis
ENSGAGG00000000132	RPUSD4	97	61.756	ENSFDAG00000014307	RPUSD4	94	61.756	Fukomys_damarensis
ENSGAGG00000000132	RPUSD4	96	50.852	ENSFHEG00000004329	rpusd4	91	50.852	Fundulus_heteroclitus
ENSGAGG00000000132	RPUSD4	90	50.154	ENSGMOG00000017726	rpusd4	97	50.154	Gadus_morhua
ENSGAGG00000000132	RPUSD4	98	64.167	ENSGALG00000024326	RPUSD4	99	65.659	Gallus_gallus
ENSGAGG00000000132	RPUSD4	96	49.020	ENSGAFG00000021559	rpusd4	91	49.020	Gambusia_affinis
ENSGAGG00000000132	RPUSD4	81	52.703	ENSGACG00000001657	rpusd4	99	49.405	Gasterosteus_aculeatus
ENSGAGG00000000132	RPUSD4	93	64.583	ENSGGOG00000016494	RPUSD4	89	64.583	Gorilla_gorilla
ENSGAGG00000000132	RPUSD4	95	51.862	ENSHBUG00000022838	rpusd4	89	51.862	Haplochromis_burtoni
ENSGAGG00000000132	RPUSD4	94	63.127	ENSHGLG00000002285	RPUSD4	89	63.127	Heterocephalus_glaber_female
ENSGAGG00000000132	RPUSD4	94	63.127	ENSHGLG00100006385	RPUSD4	89	63.127	Heterocephalus_glaber_male
ENSGAGG00000000132	RPUSD4	91	51.515	ENSHCOG00000006612	rpusd4	84	51.515	Hippocampus_comes
ENSGAGG00000000132	RPUSD4	99	53.552	ENSIPUG00000023879	rusd4	94	53.552	Ictalurus_punctatus
ENSGAGG00000000132	RPUSD4	96	64.553	ENSSTOG00000025280	RPUSD4	95	64.553	Ictidomys_tridecemlineatus
ENSGAGG00000000132	RPUSD4	93	62.275	ENSJJAG00000018673	Rpusd4	90	62.275	Jaculus_jaculus
ENSGAGG00000000132	RPUSD4	95	51.412	ENSKMAG00000021805	rpusd4	91	51.412	Kryptolebias_marmoratus
ENSGAGG00000000132	RPUSD4	95	50.432	ENSLBEG00000020394	rpusd4	96	50.432	Labrus_bergylta
ENSGAGG00000000132	RPUSD4	89	65.732	ENSLACG00000011028	RPUSD4	81	65.732	Latimeria_chalumnae
ENSGAGG00000000132	RPUSD4	99	47.956	ENSLOCG00000003124	rpusd4	97	47.956	Lepisosteus_oculatus
ENSGAGG00000000132	RPUSD4	97	61.891	ENSLAFG00000005211	RPUSD4	100	57.534	Loxodonta_africana
ENSGAGG00000000132	RPUSD4	97	61.690	ENSMFAG00000039513	RPUSD4	94	61.690	Macaca_fascicularis
ENSGAGG00000000132	RPUSD4	97	61.972	ENSMMUG00000007933	RPUSD4	94	61.972	Macaca_mulatta
ENSGAGG00000000132	RPUSD4	97	61.690	ENSMNEG00000027414	RPUSD4	94	61.690	Macaca_nemestrina
ENSGAGG00000000132	RPUSD4	97	61.690	ENSMLEG00000042461	RPUSD4	94	61.690	Mandrillus_leucophaeus
ENSGAGG00000000132	RPUSD4	96	49.577	ENSMAMG00000023839	rpusd4	91	49.577	Mastacembelus_armatus
ENSGAGG00000000132	RPUSD4	95	51.862	ENSMZEG00005011999	rpusd4	89	51.862	Maylandia_zebra
ENSGAGG00000000132	RPUSD4	77	75.090	ENSMGAG00000000840	RPUSD4	99	70.405	Meleagris_gallopavo
ENSGAGG00000000132	RPUSD4	98	61.560	ENSMAUG00000010280	Rpusd4	95	61.560	Mesocricetus_auratus
ENSGAGG00000000132	RPUSD4	99	60.942	ENSMICG00000015979	RPUSD4	90	66.777	Microcebus_murinus
ENSGAGG00000000132	RPUSD4	98	59.053	ENSMOCG00000000661	Rpusd4	95	59.053	Microtus_ochrogaster
ENSGAGG00000000132	RPUSD4	86	51.282	ENSMMOG00000021731	rpusd4	92	51.282	Mola_mola
ENSGAGG00000000132	RPUSD4	92	64.970	ENSMODG00000004521	RPUSD4	85	64.970	Monodelphis_domestica
ENSGAGG00000000132	RPUSD4	85	52.597	ENSMALG00000005839	rpusd4	97	51.084	Monopterus_albus
ENSGAGG00000000132	RPUSD4	98	61.003	MGP_CAROLIEiJ_G0031954	Rpusd4	95	61.003	Mus_caroli
ENSGAGG00000000132	RPUSD4	93	63.582	ENSMUSG00000032044	Rpusd4	88	63.582	Mus_musculus
ENSGAGG00000000132	RPUSD4	98	62.117	MGP_PahariEiJ_G0014819	Rpusd4	95	62.117	Mus_pahari
ENSGAGG00000000132	RPUSD4	93	63.881	MGP_SPRETEiJ_G0033078	Rpusd4	88	63.881	Mus_spretus
ENSGAGG00000000132	RPUSD4	97	62.712	ENSMPUG00000006608	RPUSD4	94	62.712	Mustela_putorius_furo
ENSGAGG00000000132	RPUSD4	93	64.881	ENSMLUG00000017328	-	88	64.881	Myotis_lucifugus
ENSGAGG00000000132	RPUSD4	71	66.535	ENSMLUG00000029348	-	99	66.535	Myotis_lucifugus
ENSGAGG00000000132	RPUSD4	96	63.112	ENSNGAG00000020847	Rpusd4	92	63.112	Nannospalax_galili
ENSGAGG00000000132	RPUSD4	93	51.917	ENSNBRG00000005207	rpusd4	98	51.917	Neolamprologus_brichardi
ENSGAGG00000000132	RPUSD4	93	63.393	ENSNLEG00000007465	RPUSD4	89	63.393	Nomascus_leucogenys
ENSGAGG00000000132	RPUSD4	98	64.589	ENSMEUG00000004370	RPUSD4	94	64.589	Notamacropus_eugenii
ENSGAGG00000000132	RPUSD4	65	46.610	ENSOPRG00000013141	-	89	46.610	Ochotona_princeps
ENSGAGG00000000132	RPUSD4	98	61.667	ENSODEG00000004577	RPUSD4	95	61.667	Octodon_degus
ENSGAGG00000000132	RPUSD4	95	51.576	ENSONIG00000018879	rpusd4	89	51.576	Oreochromis_niloticus
ENSGAGG00000000132	RPUSD4	81	69.153	ENSOANG00000007247	RPUSD4	94	69.024	Ornithorhynchus_anatinus
ENSGAGG00000000132	RPUSD4	99	62.637	ENSOCUG00000017039	RPUSD4	96	62.637	Oryctolagus_cuniculus
ENSGAGG00000000132	RPUSD4	95	49.292	ENSORLG00000002750	rpusd4	93	49.415	Oryzias_latipes
ENSGAGG00000000132	RPUSD4	95	48.424	ENSORLG00020002044	rpusd4	87	48.424	Oryzias_latipes_hni
ENSGAGG00000000132	RPUSD4	97	49.025	ENSORLG00015020034	rpusd4	89	49.162	Oryzias_latipes_hsok
ENSGAGG00000000132	RPUSD4	89	50.926	ENSOMEG00000004861	rpusd4	80	50.926	Oryzias_melastigma
ENSGAGG00000000132	RPUSD4	94	65.294	ENSOGAG00000008922	RPUSD4	89	65.294	Otolemur_garnettii
ENSGAGG00000000132	RPUSD4	89	63.354	ENSOARG00000012238	RPUSD4	87	63.142	Ovis_aries
ENSGAGG00000000132	RPUSD4	93	64.583	ENSPPAG00000042883	RPUSD4	82	64.583	Pan_paniscus
ENSGAGG00000000132	RPUSD4	98	61.064	ENSPPRG00000003081	RPUSD4	88	64.072	Panthera_pardus
ENSGAGG00000000132	RPUSD4	98	61.064	ENSPTIG00000012059	RPUSD4	85	67.333	Panthera_tigris_altaica
ENSGAGG00000000132	RPUSD4	93	64.583	ENSPTRG00000004454	RPUSD4	88	64.970	Pan_troglodytes
ENSGAGG00000000132	RPUSD4	93	63.690	ENSPANG00000015040	RPUSD4	89	63.690	Papio_anubis
ENSGAGG00000000132	RPUSD4	92	59.036	ENSPKIG00000023986	rpusd4	85	59.036	Paramormyrops_kingsleyae
ENSGAGG00000000132	RPUSD4	83	84.667	ENSPSIG00000014268	RPUSD4	95	84.667	Pelodiscus_sinensis
ENSGAGG00000000132	RPUSD4	97	45.682	ENSPMGG00000002806	rpusd4	94	45.682	Periophthalmus_magnuspinnatus
ENSGAGG00000000132	RPUSD4	98	56.145	ENSPEMG00000000278	Rpusd4	94	56.145	Peromyscus_maniculatus_bairdii
ENSGAGG00000000132	RPUSD4	84	41.791	ENSPMAG00000008183	rpusd4	97	41.791	Petromyzon_marinus
ENSGAGG00000000132	RPUSD4	96	63.897	ENSPCIG00000010212	RPUSD4	95	63.897	Phascolarctos_cinereus
ENSGAGG00000000132	RPUSD4	98	48.649	ENSPFOG00000019030	rpusd4	97	48.649	Poecilia_formosa
ENSGAGG00000000132	RPUSD4	98	49.185	ENSPLAG00000016848	rpusd4	93	49.185	Poecilia_latipinna
ENSGAGG00000000132	RPUSD4	98	48.098	ENSPMEG00000017534	rpusd4	93	48.098	Poecilia_mexicana
ENSGAGG00000000132	RPUSD4	90	49.853	ENSPREG00000005689	rpusd4	88	49.853	Poecilia_reticulata
ENSGAGG00000000132	RPUSD4	93	64.286	ENSPPYG00000004043	RPUSD4	89	64.286	Pongo_abelii
ENSGAGG00000000132	RPUSD4	78	60.452	ENSPCAG00000000753	RPUSD4	77	60.112	Procavia_capensis
ENSGAGG00000000132	RPUSD4	99	55.956	ENSPCOG00000020694	RPUSD4	97	55.956	Propithecus_coquereli
ENSGAGG00000000132	RPUSD4	96	60.282	ENSPVAG00000000988	RPUSD4	94	60.282	Pteropus_vampyrus
ENSGAGG00000000132	RPUSD4	95	51.862	ENSPNYG00000009652	rpusd4	89	51.862	Pundamilia_nyererei
ENSGAGG00000000132	RPUSD4	96	51.149	ENSPNAG00000012264	rpusd4	91	51.149	Pygocentrus_nattereri
ENSGAGG00000000132	RPUSD4	98	61.667	ENSRNOG00000011567	Rpusd4	95	61.667	Rattus_norvegicus
ENSGAGG00000000132	RPUSD4	93	63.284	ENSRBIG00000034842	RPUSD4	89	63.095	Rhinopithecus_bieti
ENSGAGG00000000132	RPUSD4	93	63.284	ENSRROG00000039753	RPUSD4	89	63.095	Rhinopithecus_roxellana
ENSGAGG00000000132	RPUSD4	93	63.095	ENSSBOG00000030413	RPUSD4	90	63.095	Saimiri_boliviensis_boliviensis
ENSGAGG00000000132	RPUSD4	83	67.000	ENSSHAG00000008304	RPUSD4	99	67.000	Sarcophilus_harrisii
ENSGAGG00000000132	RPUSD4	91	57.958	ENSSFOG00015006203	rpusd4	90	58.258	Scleropages_formosus
ENSGAGG00000000132	RPUSD4	93	50.742	ENSSMAG00000020978	rpusd4	88	51.205	Scophthalmus_maximus
ENSGAGG00000000132	RPUSD4	96	48.991	ENSSDUG00000013399	rpusd4	91	48.991	Seriola_dumerili
ENSGAGG00000000132	RPUSD4	89	50.309	ENSSLDG00000023507	rpusd4	85	50.309	Seriola_lalandi_dorsalis
ENSGAGG00000000132	RPUSD4	99	70.000	ENSSPUG00000001401	RPUSD4	99	70.833	Sphenodon_punctatus
ENSGAGG00000000132	RPUSD4	95	49.858	ENSSPAG00000012163	rpusd4	90	49.858	Stegastes_partitus
ENSGAGG00000000132	RPUSD4	92	62.462	ENSSSCG00000015233	RPUSD4	88	62.462	Sus_scrofa
ENSGAGG00000000132	RPUSD4	83	72.575	ENSTGUG00000000773	RPUSD4	99	72.575	Taeniopygia_guttata
ENSGAGG00000000132	RPUSD4	91	48.632	ENSTRUG00000012283	rpusd4	84	48.632	Takifugu_rubripes
ENSGAGG00000000132	RPUSD4	89	49.383	ENSTNIG00000014676	rpusd4	82	49.383	Tetraodon_nigroviridis
ENSGAGG00000000132	RPUSD4	93	62.090	ENSTTRG00000001555	RPUSD4	89	62.090	Tursiops_truncatus
ENSGAGG00000000132	RPUSD4	93	63.988	ENSUMAG00000002219	RPUSD4	89	63.988	Ursus_maritimus
ENSGAGG00000000132	RPUSD4	66	63.025	ENSVPAG00000001066	RPUSD4	89	63.025	Vicugna_pacos
ENSGAGG00000000132	RPUSD4	93	63.393	ENSVVUG00000020101	RPUSD4	88	63.988	Vulpes_vulpes
ENSGAGG00000000132	RPUSD4	97	49.724	ENSXCOG00000004676	rpusd4	94	48.747	Xiphophorus_couchianus
ENSGAGG00000000132	RPUSD4	97	49.448	ENSXMAG00000023351	rpusd4	92	49.448	Xiphophorus_maculatus