EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000000247 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 132254 bases
Position: chrPPEB01004467.1:4351-136604
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000000539	TUDOR	PF00567.24	2e-31	1	2
ENSGAGP00000000539	TUDOR	PF00567.24	2e-31	2	2
ENSGAGP00000000528	TUDOR	PF00567.24	2.4e-31	1	2
ENSGAGP00000000528	TUDOR	PF00567.24	2.4e-31	2	2
ENSGAGP00000000539	DEAD	PF00270.29	1.1e-07	1	1
ENSGAGP00000000528	DEAD	PF00270.29	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000000588	-	3582	-	ENSGAGP00000000528	1193 (aa)	-	-
ENSGAGT00000000602	-	3144	-	ENSGAGP00000000539	1047 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000000247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000000247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000000247	-	94	40.177	ENSAPOG00000006421	tdrd12	99	40.177	Acanthochromis_polyacanthus
ENSGAGG00000000247	-	67	65.912	ENSAMEG00000015440	-	95	72.483	Ailuropoda_melanoleuca
ENSGAGG00000000247	-	94	40.078	ENSACIG00000021652	tdrd12	98	40.078	Amphilophus_citrinellus
ENSGAGG00000000247	-	92	40.423	ENSAOCG00000016463	tdrd12	96	38.630	Amphiprion_ocellaris
ENSGAGG00000000247	-	94	40.856	ENSAPEG00000015105	tdrd12	98	40.856	Amphiprion_percula
ENSGAGG00000000247	-	95	39.941	ENSATEG00000011608	tdrd12	99	39.941	Anabas_testudineus
ENSGAGG00000000247	-	92	69.784	ENSAPLG00000011417	-	97	63.747	Anas_platyrhynchos
ENSGAGG00000000247	-	69	62.551	ENSACAG00000029615	-	96	57.407	Anolis_carolinensis
ENSGAGG00000000247	-	92	66.150	ENSANAG00000023166	-	87	65.779	Aotus_nancymaae
ENSGAGG00000000247	-	94	44.144	ENSAMXG00000013811	tdrd12	98	44.144	Astyanax_mexicanus
ENSGAGG00000000247	-	92	66.337	ENSCJAG00000000763	-	83	66.154	Callithrix_jacchus
ENSGAGG00000000247	-	94	70.155	ENSCAFG00000007505	TDRD12	88	70.039	Canis_familiaris
ENSGAGG00000000247	-	94	70.155	ENSCAFG00020019790	-	87	70.155	Canis_lupus_dingo
ENSGAGG00000000247	-	91	66.929	ENSTSYG00000012034	-	82	66.929	Carlito_syrichta
ENSGAGG00000000247	-	88	59.574	ENSCPOG00000002876	-	99	58.308	Cavia_porcellus
ENSGAGG00000000247	-	92	66.761	ENSCCAG00000037592	-	82	66.341	Cebus_capucinus
ENSGAGG00000000247	-	91	66.431	ENSCATG00000038627	-	88	62.117	Cercocebus_atys
ENSGAGG00000000247	-	95	68.504	ENSCLAG00000012138	-	89	68.504	Chinchilla_lanigera
ENSGAGG00000000247	-	91	66.537	ENSCSAG00000004794	-	88	66.537	Chlorocebus_sabaeus
ENSGAGG00000000247	-	95	92.369	ENSCPBG00000000147	-	98	89.764	Chrysemys_picta_bellii
ENSGAGG00000000247	-	92	65.267	ENSCANG00000040785	-	88	65.267	Colobus_angolensis_palliatus
ENSGAGG00000000247	-	89	69.841	ENSCGRG00001021407	-	90	69.841	Cricetulus_griseus_chok1gshd
ENSGAGG00000000247	-	87	69.198	ENSCGRG00000007286	-	90	69.198	Cricetulus_griseus_crigri
ENSGAGG00000000247	-	85	41.485	ENSCSEG00000001744	-	71	41.485	Cynoglossus_semilaevis
ENSGAGG00000000247	-	59	46.457	ENSCVAG00000004277	tdrd12	90	46.457	Cyprinodon_variegatus
ENSGAGG00000000247	-	89	49.211	ENSDARG00000075217	tdrd12	76	49.145	Danio_rerio
ENSGAGG00000000247	-	95	68.093	ENSDNOG00000017244	-	89	68.093	Dasypus_novemcinctus
ENSGAGG00000000247	-	89	59.706	ENSDORG00000012134	-	99	57.450	Dipodomys_ordii
ENSGAGG00000000247	-	59	64.384	ENSETEG00000015088	-	68	64.384	Echinops_telfairi
ENSGAGG00000000247	-	95	68.217	ENSEASG00005021053	-	87	68.217	Equus_asinus_asinus
ENSGAGG00000000247	-	86	68.687	ENSEEUG00000008457	-	83	68.687	Erinaceus_europaeus
ENSGAGG00000000247	-	86	48.094	ENSELUG00000017494	tdrd12	90	53.532	Esox_lucius
ENSGAGG00000000247	-	95	53.113	ENSFALG00000000259	-	98	50.366	Ficedula_albicollis
ENSGAGG00000000247	-	87	67.657	ENSFDAG00000014797	-	90	67.657	Fukomys_damarensis
ENSGAGG00000000247	-	54	45.902	ENSFHEG00000002884	-	55	45.902	Fundulus_heteroclitus
ENSGAGG00000000247	-	97	53.547	ENSGALG00000004704	-	97	53.547	Gallus_gallus
ENSGAGG00000000247	-	86	44.397	ENSGAFG00000003729	tdrd12	77	41.716	Gambusia_affinis
ENSGAGG00000000247	-	92	66.794	ENSGGOG00000011938	-	88	66.794	Gorilla_gorilla
ENSGAGG00000000247	-	94	41.444	ENSHBUG00000020426	tdrd12	99	41.444	Haplochromis_burtoni
ENSGAGG00000000247	-	88	61.310	ENSHGLG00000015608	-	97	59.225	Heterocephalus_glaber_female
ENSGAGG00000000247	-	90	66.524	ENSHGLG00100008227	-	86	66.524	Heterocephalus_glaber_male
ENSGAGG00000000247	-	86	44.857	ENSIPUG00000016825	tdrd12	83	42.584	Ictalurus_punctatus
ENSGAGG00000000247	-	88	67.949	ENSSTOG00000013638	-	90	67.949	Ictidomys_tridecemlineatus
ENSGAGG00000000247	-	68	44.190	ENSKMAG00000008031	tdrd12	84	44.190	Kryptolebias_marmoratus
ENSGAGG00000000247	-	94	39.118	ENSLBEG00000005601	tdrd12	99	38.986	Labrus_bergylta
ENSGAGG00000000247	-	93	61.616	ENSLACG00000010650	-	91	61.616	Latimeria_chalumnae
ENSGAGG00000000247	-	90	48.087	ENSLOCG00000001690	tdrd12	76	50.962	Lepisosteus_oculatus
ENSGAGG00000000247	-	94	65.585	ENSLAFG00000008698	-	90	65.590	Loxodonta_africana
ENSGAGG00000000247	-	92	66.431	ENSMFAG00000044756	-	85	66.412	Macaca_fascicularis
ENSGAGG00000000247	-	95	66.535	ENSMMUG00000015608	-	85	66.535	Macaca_mulatta
ENSGAGG00000000247	-	91	66.535	ENSMNEG00000043067	-	84	66.535	Macaca_nemestrina
ENSGAGG00000000247	-	91	66.929	ENSMLEG00000042036	-	86	66.929	Mandrillus_leucophaeus
ENSGAGG00000000247	-	94	37.687	ENSMAMG00000013867	tdrd12	99	37.687	Mastacembelus_armatus
ENSGAGG00000000247	-	94	41.782	ENSMZEG00005024214	tdrd12	99	41.782	Maylandia_zebra
ENSGAGG00000000247	-	66	63.768	ENSMGAG00000005627	-	100	63.768	Meleagris_gallopavo
ENSGAGG00000000247	-	88	66.879	ENSMAUG00000013767	-	90	66.879	Mesocricetus_auratus
ENSGAGG00000000247	-	92	66.573	ENSMICG00000003623	-	86	64.745	Microcebus_murinus
ENSGAGG00000000247	-	89	67.442	ENSMOCG00000002366	-	89	67.647	Microtus_ochrogaster
ENSGAGG00000000247	-	94	39.862	ENSMMOG00000018662	tdrd12	99	39.862	Mola_mola
ENSGAGG00000000247	-	88	74.324	ENSMODG00000012286	-	80	74.324	Monodelphis_domestica
ENSGAGG00000000247	-	86	41.935	ENSMALG00000006918	tdrd12	78	41.935	Monopterus_albus
ENSGAGG00000000247	-	92	67.681	MGP_CAROLIEiJ_G0029587	-	97	68.159	Mus_caroli
ENSGAGG00000000247	-	93	68.061	MGP_PahariEiJ_G0012821	-	97	69.154	Mus_pahari
ENSGAGG00000000247	-	92	69.349	MGP_SPRETEiJ_G0030686	-	97	70.352	Mus_spretus
ENSGAGG00000000247	-	96	71.103	ENSMPUG00000007791	-	89	71.103	Mustela_putorius_furo
ENSGAGG00000000247	-	83	70.297	ENSMLUG00000010694	-	87	70.297	Myotis_lucifugus
ENSGAGG00000000247	-	91	67.331	ENSNGAG00000000793	-	90	67.331	Nannospalax_galili
ENSGAGG00000000247	-	64	44.395	ENSNBRG00000017878	-	94	44.395	Neolamprologus_brichardi
ENSGAGG00000000247	-	92	65.297	ENSNLEG00000007635	-	88	61.097	Nomascus_leucogenys
ENSGAGG00000000247	-	60	88.571	ENSMEUG00000014059	-	59	88.571	Notamacropus_eugenii
ENSGAGG00000000247	-	85	69.048	ENSOPRG00000015809	-	80	69.048	Ochotona_princeps
ENSGAGG00000000247	-	86	67.987	ENSODEG00000014443	-	90	67.987	Octodon_degus
ENSGAGG00000000247	-	83	45.498	ENSONIG00000010630	tdrd12	82	45.498	Oreochromis_niloticus
ENSGAGG00000000247	-	53	60.823	ENSOANG00000029707	-	96	60.823	Ornithorhynchus_anatinus
ENSGAGG00000000247	-	87	61.231	ENSOCUG00000016911	-	98	54.015	Oryctolagus_cuniculus
ENSGAGG00000000247	-	83	43.988	ENSORLG00000027859	tdrd12	87	40.241	Oryzias_latipes
ENSGAGG00000000247	-	85	43.396	ENSORLG00015020835	tdrd12	71	43.396	Oryzias_latipes_hsok
ENSGAGG00000000247	-	94	39.587	ENSOMEG00000021862	tdrd12	97	39.587	Oryzias_melastigma
ENSGAGG00000000247	-	92	66.432	ENSOGAG00000001571	-	88	66.434	Otolemur_garnettii
ENSGAGG00000000247	-	93	67.557	ENSOARG00000004254	-	89	67.557	Ovis_aries
ENSGAGG00000000247	-	91	66.006	ENSPPAG00000042284	-	88	61.862	Pan_paniscus
ENSGAGG00000000247	-	93	69.884	ENSPPRG00000002389	-	89	69.057	Panthera_pardus
ENSGAGG00000000247	-	92	66.714	ENSPTRG00000010795	TDRD12	88	62.500	Pan_troglodytes
ENSGAGG00000000247	-	92	67.411	ENSPANG00000001203	-	89	67.411	Papio_anubis
ENSGAGG00000000247	-	88	46.355	ENSPKIG00000006407	tdrd12	74	46.355	Paramormyrops_kingsleyae
ENSGAGG00000000247	-	84	91.339	ENSPSIG00000012970	-	90	91.339	Pelodiscus_sinensis
ENSGAGG00000000247	-	94	39.361	ENSPMGG00000022691	tdrd12	99	39.660	Periophthalmus_magnuspinnatus
ENSGAGG00000000247	-	97	63.735	ENSPEMG00000009233	-	90	71.260	Peromyscus_maniculatus_bairdii
ENSGAGG00000000247	-	95	69.615	ENSPCIG00000020993	-	90	69.615	Phascolarctos_cinereus
ENSGAGG00000000247	-	88	42.876	ENSPFOG00000008184	tdrd12	74	44.557	Poecilia_formosa
ENSGAGG00000000247	-	74	39.520	ENSPMEG00000006420	tdrd12	99	39.520	Poecilia_mexicana
ENSGAGG00000000247	-	74	45.914	ENSPREG00000004916	tdrd12	70	45.914	Poecilia_reticulata
ENSGAGG00000000247	-	95	66.794	ENSPPYG00000009821	-	90	66.794	Pongo_abelii
ENSGAGG00000000247	-	72	65.339	ENSPCAG00000013510	-	70	65.339	Procavia_capensis
ENSGAGG00000000247	-	91	65.562	ENSPCOG00000023600	-	84	62.853	Propithecus_coquereli
ENSGAGG00000000247	-	85	78.462	ENSPVAG00000014599	-	82	78.462	Pteropus_vampyrus
ENSGAGG00000000247	-	94	41.205	ENSPNYG00000022866	tdrd12	99	41.205	Pundamilia_nyererei
ENSGAGG00000000247	-	88	46.387	ENSPNAG00000003413	tdrd12	97	41.675	Pygocentrus_nattereri
ENSGAGG00000000247	-	95	70.076	ENSRNOG00000012719	Tdrd12	89	70.076	Rattus_norvegicus
ENSGAGG00000000247	-	91	64.376	ENSRBIG00000019899	-	90	60.430	Rhinopithecus_bieti
ENSGAGG00000000247	-	92	66.289	ENSRROG00000036351	-	88	66.031	Rhinopithecus_roxellana
ENSGAGG00000000247	-	92	67.044	ENSSBOG00000034916	-	83	66.853	Saimiri_boliviensis_boliviensis
ENSGAGG00000000247	-	91	72.763	ENSSHAG00000002599	-	86	72.763	Sarcophilus_harrisii
ENSGAGG00000000247	-	77	46.242	ENSSFOG00015000297	tdrd12	76	46.242	Scleropages_formosus
ENSGAGG00000000247	-	95	39.080	ENSSMAG00000002870	tdrd12	99	39.080	Scophthalmus_maximus
ENSGAGG00000000247	-	96	40.595	ENSSDUG00000017304	tdrd12	100	40.595	Seriola_dumerili
ENSGAGG00000000247	-	96	39.300	ENSSLDG00000004415	tdrd12	100	39.300	Seriola_lalandi_dorsalis
ENSGAGG00000000247	-	90	66.667	ENSSARG00000005357	-	87	66.667	Sorex_araneus
ENSGAGG00000000247	-	93	70.438	ENSSPUG00000013174	-	91	70.438	Sphenodon_punctatus
ENSGAGG00000000247	-	93	37.074	ENSSPAG00000005706	tdrd12	94	37.074	Stegastes_partitus
ENSGAGG00000000247	-	77	64.216	ENSSSCG00000002857	-	82	62.784	Sus_scrofa
ENSGAGG00000000247	-	62	58.396	ENSTGUG00000009121	-	99	59.846	Taeniopygia_guttata
ENSGAGG00000000247	-	93	35.165	ENSTRUG00000021888	tdrd12	99	35.258	Takifugu_rubripes
ENSGAGG00000000247	-	76	68.243	ENSTBEG00000007609	-	73	68.243	Tupaia_belangeri
ENSGAGG00000000247	-	91	65.537	ENSTTRG00000012206	-	88	65.090	Tursiops_truncatus
ENSGAGG00000000247	-	91	65.254	ENSUAMG00000007298	-	84	64.453	Ursus_americanus
ENSGAGG00000000247	-	93	64.453	ENSUMAG00000014314	-	84	64.453	Ursus_maritimus
ENSGAGG00000000247	-	86	61.024	ENSVPAG00000012051	-	87	61.024	Vicugna_pacos
ENSGAGG00000000247	-	94	70.155	ENSVVUG00000016637	-	89	70.155	Vulpes_vulpes
ENSGAGG00000000247	-	65	51.077	ENSXETG00000031945	-	94	51.077	Xenopus_tropicalis
ENSGAGG00000000247	-	93	41.100	ENSXMAG00000020908	tdrd12	97	41.100	Xiphophorus_maculatus