EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000000271 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 49052 bases
Position: chrPPEB01001134.1:92762-141813
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000000434	KH_1	PF00013.29	8.2e-46	1	3
ENSGAGP00000000434	KH_1	PF00013.29	8.2e-46	2	3
ENSGAGP00000000434	KH_1	PF00013.29	8.2e-46	3	3
ENSGAGP00000000421	KH_1	PF00013.29	1e-38	1	2
ENSGAGP00000000421	KH_1	PF00013.29	1e-38	2	2
ENSGAGP00000000434	KH_2	PF07650.17	1.7e-11	1	1
ENSGAGP00000000421	KH_2	PF07650.17	4.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000000473	-	1089	-	ENSGAGP00000000421	362 (aa)	-	-
ENSGAGT00000000487	-	800	-	ENSGAGP00000000434	266 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000000271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000000271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000000271	-	100	42.188	ENSGAGG00000009498	NOVA2	52	42.188
ENSGAGG00000000271	-	84	48.571	ENSGAGG00000023024	HNRNPK	51	48.571
ENSGAGG00000000271	-	100	68.165	ENSGAGG00000022116	PCBP4	69	68.165
ENSGAGG00000000271	-	100	77.500	ENSGAGG00000010410	PCBP2	92	77.500
ENSGAGG00000000271	-	90	83.240	ENSGAGG00000006956	-	72	83.240

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000000271	-	100	89.513	ENSAPOG00000016582	-	89	89.513	Acanthochromis_polyacanthus
ENSGAGG00000000271	-	100	88.390	ENSAPOG00000020003	pcbp3	76	88.390	Acanthochromis_polyacanthus
ENSGAGG00000000271	-	100	84.615	ENSAMEG00000001697	-	92	82.031	Ailuropoda_melanoleuca
ENSGAGG00000000271	-	100	86.861	ENSACIG00000002739	-	84	86.861	Amphilophus_citrinellus
ENSGAGG00000000271	-	100	81.034	ENSACIG00000010933	pcbp3	84	81.034	Amphilophus_citrinellus
ENSGAGG00000000271	-	100	88.390	ENSAOCG00000008592	-	92	88.390	Amphiprion_ocellaris
ENSGAGG00000000271	-	100	85.971	ENSAOCG00000007806	-	95	85.971	Amphiprion_ocellaris
ENSGAGG00000000271	-	100	80.822	ENSAPEG00000008011	pcbp3	94	80.608	Amphiprion_percula
ENSGAGG00000000271	-	100	89.513	ENSAPEG00000005209	-	84	89.513	Amphiprion_percula
ENSGAGG00000000271	-	100	89.513	ENSATEG00000009833	-	84	89.513	Anabas_testudineus
ENSGAGG00000000271	-	100	81.379	ENSATEG00000015787	-	89	81.379	Anabas_testudineus
ENSGAGG00000000271	-	100	87.189	ENSAPLG00000002975	-	92	87.189	Anas_platyrhynchos
ENSGAGG00000000271	-	100	84.127	ENSAPLG00000008951	-	95	80.711	Anas_platyrhynchos
ENSGAGG00000000271	-	100	79.032	ENSACAG00000004607	-	91	81.579	Anolis_carolinensis
ENSGAGG00000000271	-	100	91.003	ENSACAG00000009819	-	91	97.143	Anolis_carolinensis
ENSGAGG00000000271	-	84	90.179	ENSANAG00000030702	-	94	90.179	Aotus_nancymaae
ENSGAGG00000000271	-	100	88.764	ENSACLG00000003801	-	91	88.764	Astatotilapia_calliptera
ENSGAGG00000000271	-	100	80.479	ENSACLG00000011835	pcbp3	94	80.608	Astatotilapia_calliptera
ENSGAGG00000000271	-	100	82.414	ENSAMXG00000003440	pcbp3	94	82.759	Astyanax_mexicanus
ENSGAGG00000000271	-	100	87.970	ENSAMXG00000013588	-	88	87.970	Astyanax_mexicanus
ENSGAGG00000000271	-	99	71.959	ENSAMXG00000001760	zgc:110045	82	64.083	Astyanax_mexicanus
ENSGAGG00000000271	-	96	91.327	ENSCAFG00020019472	-	84	91.327	Canis_lupus_dingo
ENSGAGG00000000271	-	100	90.637	ENSCSAG00000007440	-	83	90.637	Chlorocebus_sabaeus
ENSGAGG00000000271	-	100	91.760	ENSCPBG00000012151	-	87	91.760	Chrysemys_picta_bellii
ENSGAGG00000000271	-	100	100.000	ENSCPBG00000000733	-	95	99.724	Chrysemys_picta_bellii
ENSGAGG00000000271	-	100	88.015	ENSCSEG00000000822	pcbp3	88	88.015	Cynoglossus_semilaevis
ENSGAGG00000000271	-	100	71.622	ENSCSEG00000016984	-	88	73.604	Cynoglossus_semilaevis
ENSGAGG00000000271	-	100	81.100	ENSCVAG00000014482	pcbp3	94	80.916	Cyprinodon_variegatus
ENSGAGG00000000271	-	100	89.139	ENSCVAG00000005262	-	94	89.139	Cyprinodon_variegatus
ENSGAGG00000000271	-	100	82.759	ENSDARG00000054378	pcbp3	92	86.585	Danio_rerio
ENSGAGG00000000271	-	73	68.545	ENSDARG00000110961	zgc:110045	100	66.197	Danio_rerio
ENSGAGG00000000271	-	84	90.625	ENSETEG00000015988	-	70	90.625	Echinops_telfairi
ENSGAGG00000000271	-	99	74.340	ENSEBUG00000016192	pcbp3	98	74.340	Eptatretus_burgeri
ENSGAGG00000000271	-	100	83.333	ENSEBUG00000007485	-	78	81.283	Eptatretus_burgeri
ENSGAGG00000000271	-	79	68.868	ENSEBUG00000005495	pcbp3	63	68.868	Eptatretus_burgeri
ENSGAGG00000000271	-	100	84.015	ENSELUG00000003521	pcbp3	94	81.298	Esox_lucius
ENSGAGG00000000271	-	100	89.513	ENSELUG00000001560	-	81	89.513	Esox_lucius
ENSGAGG00000000271	-	100	91.495	ENSFALG00000004411	-	96	90.464	Ficedula_albicollis
ENSGAGG00000000271	-	100	92.105	ENSFALG00000003949	-	92	92.105	Ficedula_albicollis
ENSGAGG00000000271	-	100	89.513	ENSFHEG00000006539	-	84	89.513	Fundulus_heteroclitus
ENSGAGG00000000271	-	100	88.722	ENSFHEG00000016615	pcbp3	84	88.722	Fundulus_heteroclitus
ENSGAGG00000000271	-	100	73.540	ENSGMOG00000011992	pcbp3	91	73.793	Gadus_morhua
ENSGAGG00000000271	-	99	64.808	ENSGMOG00000008611	-	87	64.808	Gadus_morhua
ENSGAGG00000000271	-	87	93.529	ENSGALG00000004394	-	91	93.529	Gallus_gallus
ENSGAGG00000000271	-	100	91.696	ENSGALG00000013155	-	90	97.992	Gallus_gallus
ENSGAGG00000000271	-	100	89.139	ENSGAFG00000010274	-	89	89.139	Gambusia_affinis
ENSGAGG00000000271	-	100	81.379	ENSGAFG00000011430	pcbp3	84	81.379	Gambusia_affinis
ENSGAGG00000000271	-	100	72.168	ENSGACG00000014955	-	92	72.168	Gasterosteus_aculeatus
ENSGAGG00000000271	-	100	83.217	ENSGACG00000002266	-	91	83.217	Gasterosteus_aculeatus
ENSGAGG00000000271	-	100	88.764	ENSHBUG00000021782	-	91	88.764	Haplochromis_burtoni
ENSGAGG00000000271	-	100	88.346	ENSHBUG00000010697	pcbp3	94	80.916	Haplochromis_burtoni
ENSGAGG00000000271	-	100	85.338	ENSHCOG00000006067	-	91	85.338	Hippocampus_comes
ENSGAGG00000000271	-	100	81.379	ENSHCOG00000017868	pcbp3	94	81.226	Hippocampus_comes
ENSGAGG00000000271	-	100	89.888	ENSIPUG00000006238	pcbp3	92	86.992	Ictalurus_punctatus
ENSGAGG00000000271	-	78	60.476	ENSIPUG00000003914	zgc:110045	100	61.321	Ictalurus_punctatus
ENSGAGG00000000271	-	100	80.822	ENSKMAG00000003046	pcbp3	94	80.608	Kryptolebias_marmoratus
ENSGAGG00000000271	-	100	88.764	ENSKMAG00000018530	-	89	88.764	Kryptolebias_marmoratus
ENSGAGG00000000271	-	88	81.250	ENSLBEG00000006542	-	81	79.435	Labrus_bergylta
ENSGAGG00000000271	-	100	88.390	ENSLBEG00000006201	pcbp3	83	88.390	Labrus_bergylta
ENSGAGG00000000271	-	100	77.955	ENSLACG00000010386	pcbp3	76	76.632	Latimeria_chalumnae
ENSGAGG00000000271	-	100	91.688	ENSLACG00000010804	zgc:110045	96	91.688	Latimeria_chalumnae
ENSGAGG00000000271	-	100	83.972	ENSLOCG00000009369	pcbp3	92	87.398	Lepisosteus_oculatus
ENSGAGG00000000271	-	100	88.927	ENSLOCG00000005058	zgc:110045	96	88.831	Lepisosteus_oculatus
ENSGAGG00000000271	-	100	89.888	ENSMAMG00000011620	-	84	89.888	Mastacembelus_armatus
ENSGAGG00000000271	-	100	88.722	ENSMAMG00000022336	pcbp3	82	88.722	Mastacembelus_armatus
ENSGAGG00000000271	-	100	81.295	ENSMZEG00005014882	-	84	81.295	Maylandia_zebra
ENSGAGG00000000271	-	100	81.034	ENSMZEG00005008993	pcbp3	86	80.756	Maylandia_zebra
ENSGAGG00000000271	-	100	75.081	ENSMGAG00000001883	-	92	75.728	Meleagris_gallopavo
ENSGAGG00000000271	-	100	91.753	ENSMGAG00000006794	-	96	91.753	Meleagris_gallopavo
ENSGAGG00000000271	-	100	88.764	ENSMMOG00000005216	-	85	88.764	Mola_mola
ENSGAGG00000000271	-	100	88.722	ENSMMOG00000000730	pcbp3	75	88.722	Mola_mola
ENSGAGG00000000271	-	79	72.170	ENSMODG00000027884	-	94	78.140	Monodelphis_domestica
ENSGAGG00000000271	-	100	81.100	ENSMALG00000000691	pcbp3	85	81.100	Monopterus_albus
ENSGAGG00000000271	-	99	83.099	ENSMPUG00000001779	-	78	83.099	Mustela_putorius_furo
ENSGAGG00000000271	-	100	81.295	ENSNBRG00000016714	-	87	79.859	Neolamprologus_brichardi
ENSGAGG00000000271	-	100	81.315	ENSNBRG00000016409	-	85	81.315	Neolamprologus_brichardi
ENSGAGG00000000271	-	100	77.994	ENSOPRG00000003431	-	90	77.994	Ochotona_princeps
ENSGAGG00000000271	-	100	88.764	ENSONIG00000004611	-	91	88.764	Oreochromis_niloticus
ENSGAGG00000000271	-	100	76.052	ENSONIG00000012122	-	93	76.838	Oreochromis_niloticus
ENSGAGG00000000271	-	100	90.977	ENSOCUG00000002696	-	88	90.977	Oryctolagus_cuniculus
ENSGAGG00000000271	-	100	89.513	ENSORLG00000022739	-	91	89.513	Oryzias_latipes
ENSGAGG00000000271	-	100	88.390	ENSORLG00000000059	pcbp3	94	88.390	Oryzias_latipes
ENSGAGG00000000271	-	100	89.139	ENSORLG00020006124	-	91	89.139	Oryzias_latipes_hni
ENSGAGG00000000271	-	100	88.390	ENSORLG00020012671	pcbp3	92	88.390	Oryzias_latipes_hni
ENSGAGG00000000271	-	100	89.513	ENSORLG00015008051	-	89	89.513	Oryzias_latipes_hsok
ENSGAGG00000000271	-	100	88.390	ENSORLG00015000429	pcbp3	92	88.390	Oryzias_latipes_hsok
ENSGAGG00000000271	-	100	88.390	ENSOMEG00000020811	pcbp3	92	88.390	Oryzias_melastigma
ENSGAGG00000000271	-	100	89.513	ENSOMEG00000020162	-	91	89.513	Oryzias_melastigma
ENSGAGG00000000271	-	100	77.244	ENSOGAG00000008044	-	93	77.244	Otolemur_garnettii
ENSGAGG00000000271	-	100	90.602	ENSPKIG00000019329	pcbp3	89	90.602	Paramormyrops_kingsleyae
ENSGAGG00000000271	-	82	93.038	ENSPKIG00000020913	-	71	93.038	Paramormyrops_kingsleyae
ENSGAGG00000000271	-	100	99.724	ENSPSIG00000008350	-	100	99.724	Pelodiscus_sinensis
ENSGAGG00000000271	-	100	75.704	ENSPSIG00000014970	-	92	76.408	Pelodiscus_sinensis
ENSGAGG00000000271	-	100	81.034	ENSPMGG00000022383	pcbp3	94	81.154	Periophthalmus_magnuspinnatus
ENSGAGG00000000271	-	100	74.539	ENSPMAG00000004551	pcbp3	85	74.539	Petromyzon_marinus
ENSGAGG00000000271	-	81	92.258	ENSPMAG00000004637	-	93	92.258	Petromyzon_marinus
ENSGAGG00000000271	-	100	84.138	ENSPCIG00000028092	-	87	93.529	Phascolarctos_cinereus
ENSGAGG00000000271	-	100	76.873	ENSPLAG00000011449	pcbp3	79	76.873	Poecilia_latipinna
ENSGAGG00000000271	-	100	85.663	ENSPLAG00000004074	-	80	85.663	Poecilia_latipinna
ENSGAGG00000000271	-	100	81.949	ENSPMEG00000006653	-	87	82.131	Poecilia_mexicana
ENSGAGG00000000271	-	100	81.100	ENSPMEG00000021239	pcbp3	82	81.100	Poecilia_mexicana
ENSGAGG00000000271	-	100	89.513	ENSPREG00000020585	-	88	90.058	Poecilia_reticulata
ENSGAGG00000000271	-	100	88.390	ENSPREG00000015736	pcbp3	87	88.390	Poecilia_reticulata
ENSGAGG00000000271	-	100	88.764	ENSPNYG00000013205	-	85	88.764	Pundamilia_nyererei
ENSGAGG00000000271	-	100	88.015	ENSPNYG00000012326	pcbp3	82	88.015	Pundamilia_nyererei
ENSGAGG00000000271	-	100	89.513	ENSPNAG00000015104	pcbp3	91	89.513	Pygocentrus_nattereri
ENSGAGG00000000271	-	77	67.136	ENSPNAG00000006838	zgc:110045	100	64.789	Pygocentrus_nattereri
ENSGAGG00000000271	-	100	88.015	ENSPNAG00000008541	-	87	88.015	Pygocentrus_nattereri
ENSGAGG00000000271	-	100	90.637	ENSRNOG00000001245	Pcbp3	92	90.637	Rattus_norvegicus
ENSGAGG00000000271	-	100	83.824	ENSRBIG00000028177	-	75	83.824	Rhinopithecus_bieti
ENSGAGG00000000271	-	100	85.315	ENSSHAG00000007890	-	92	85.315	Sarcophilus_harrisii
ENSGAGG00000000271	-	100	90.226	ENSSFOG00015010205	pcbp3	89	90.226	Scleropages_formosus
ENSGAGG00000000271	-	100	92.857	ENSSFOG00015007118	-	82	92.857	Scleropages_formosus
ENSGAGG00000000271	-	100	81.661	ENSSFOG00015014706	pcbp3	94	81.538	Scleropages_formosus
ENSGAGG00000000271	-	100	88.390	ENSSMAG00000011929	pcbp3	86	88.390	Scophthalmus_maximus
ENSGAGG00000000271	-	100	89.139	ENSSMAG00000003135	-	91	89.139	Scophthalmus_maximus
ENSGAGG00000000271	-	100	81.100	ENSSDUG00000011608	pcbp3	88	81.100	Seriola_dumerili
ENSGAGG00000000271	-	100	84.815	ENSSDUG00000008502	-	87	80.899	Seriola_dumerili
ENSGAGG00000000271	-	100	89.513	ENSSLDG00000020161	-	89	89.513	Seriola_lalandi_dorsalis
ENSGAGG00000000271	-	100	81.100	ENSSLDG00000008518	pcbp3	88	81.100	Seriola_lalandi_dorsalis
ENSGAGG00000000271	-	100	92.708	ENSSPUG00000013214	-	90	91.579	Sphenodon_punctatus
ENSGAGG00000000271	-	100	85.971	ENSSPAG00000004190	-	95	85.971	Stegastes_partitus
ENSGAGG00000000271	-	100	68.276	ENSSPAG00000023341	-	82	68.276	Stegastes_partitus
ENSGAGG00000000271	-	98	85.159	ENSTGUG00000003316	-	83	85.159	Taeniopygia_guttata
ENSGAGG00000000271	-	100	98.876	ENSTGUG00000008158	-	92	98.876	Taeniopygia_guttata
ENSGAGG00000000271	-	100	89.139	ENSTRUG00000006280	-	85	89.139	Takifugu_rubripes
ENSGAGG00000000271	-	100	84.643	ENSTRUG00000013604	pcbp3	79	90.968	Takifugu_rubripes
ENSGAGG00000000271	-	100	77.994	ENSTTRG00000015075	-	93	80.377	Tursiops_truncatus
ENSGAGG00000000271	-	100	84.669	ENSXETG00000011483	pcbp1	92	84.669	Xenopus_tropicalis
ENSGAGG00000000271	-	100	88.918	ENSXETG00000010491	pcbp2	85	88.918	Xenopus_tropicalis
ENSGAGG00000000271	-	100	81.100	ENSXCOG00000020481	pcbp3	82	81.100	Xiphophorus_couchianus
ENSGAGG00000000271	-	100	80.822	ENSXMAG00000008175	pcbp3	94	80.608	Xiphophorus_maculatus
ENSGAGG00000000271	-	100	89.513	ENSXMAG00000028711	-	89	89.513	Xiphophorus_maculatus