EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000000375 (Gene tree)
Gene ID: -
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 32777 bases
Position: chrPPEB01002477.1:143087-175863
Accession: 23818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000000437	Nop52	PF05997.12	5.7e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000000491	RRP1B-201	2967	-	ENSGAGP00000000437	757 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000000375's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000000375's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000000375	RRP1B	100	51.990	ENSG00000160208	RRP1B	100	50.963	Homo_sapiens
ENSGAGG00000000375	RRP1B	68	51.541	ENSAPOG00000007490	-	57	51.966	Acanthochromis_polyacanthus
ENSGAGG00000000375	RRP1B	68	60.759	ENSAMEG00000011401	RRP1B	67	62.050	Ailuropoda_melanoleuca
ENSGAGG00000000375	RRP1B	59	50.980	ENSAOCG00000017894	-	99	53.684	Amphiprion_ocellaris
ENSGAGG00000000375	RRP1B	66	50.272	ENSAPEG00000024150	-	57	51.524	Amphiprion_percula
ENSGAGG00000000375	RRP1B	66	50.398	ENSATEG00000005045	-	55	51.752	Anabas_testudineus
ENSGAGG00000000375	RRP1B	94	66.295	ENSAPLG00000004310	RRP1B	100	65.782	Anas_platyrhynchos
ENSGAGG00000000375	RRP1B	99	57.656	ENSACAG00000017851	RRP1B	95	58.421	Anolis_carolinensis
ENSGAGG00000000375	RRP1B	100	50.384	ENSANAG00000034889	RRP1B	100	50.512	Aotus_nancymaae
ENSGAGG00000000375	RRP1B	100	47.226	ENSBTAG00000017418	RRP1B	100	47.759	Bos_taurus
ENSGAGG00000000375	RRP1B	51	53.886	ENSBTAG00000003981	RRP1	80	57.263	Bos_taurus
ENSGAGG00000000375	RRP1B	50	55.236	ENSCJAG00000043205	RRP1	70	58.580	Callithrix_jacchus
ENSGAGG00000000375	RRP1B	100	50.900	ENSCJAG00000017077	RRP1B	100	51.028	Callithrix_jacchus
ENSGAGG00000000375	RRP1B	94	48.556	ENSCAFG00000010621	RRP1B	99	47.684	Canis_familiaris
ENSGAGG00000000375	RRP1B	57	51.030	ENSCAFG00000010646	RRP1	81	53.608	Canis_familiaris
ENSGAGG00000000375	RRP1B	57	51.030	ENSCAFG00020018979	RRP1	76	58.405	Canis_lupus_dingo
ENSGAGG00000000375	RRP1B	100	49.352	ENSCAFG00020018901	RRP1B	100	48.652	Canis_lupus_dingo
ENSGAGG00000000375	RRP1B	100	46.164	ENSCPOG00000002396	RRP1B	100	45.904	Cavia_porcellus
ENSGAGG00000000375	RRP1B	100	50.639	ENSCCAG00000029384	RRP1B	100	50.447	Cebus_capucinus
ENSGAGG00000000375	RRP1B	56	52.184	ENSCCAG00000029828	RRP1	74	60.234	Cebus_capucinus
ENSGAGG00000000375	RRP1B	100	51.990	ENSCATG00000017423	RRP1B	100	51.861	Cercocebus_atys
ENSGAGG00000000375	RRP1B	53	51.225	ENSCLAG00000011639	RRP1	76	57.061	Chinchilla_lanigera
ENSGAGG00000000375	RRP1B	100	46.552	ENSCLAG00000005622	RRP1B	100	45.746	Chinchilla_lanigera
ENSGAGG00000000375	RRP1B	100	52.118	ENSCSAG00000007961	RRP1B	100	51.990	Chlorocebus_sabaeus
ENSGAGG00000000375	RRP1B	99	95.739	ENSCPBG00000010310	RRP1B	98	95.512	Chrysemys_picta_bellii
ENSGAGG00000000375	RRP1B	57	34.086	ENSCING00000003304	-	77	36.798	Ciona_intestinalis
ENSGAGG00000000375	RRP1B	100	51.605	ENSCANG00000040952	RRP1B	100	51.476	Colobus_angolensis_palliatus
ENSGAGG00000000375	RRP1B	100	47.044	ENSCGRG00001023882	-	100	46.292	Cricetulus_griseus_chok1gshd
ENSGAGG00000000375	RRP1B	53	52.956	ENSCGRG00001011920	Rrp1	79	57.880	Cricetulus_griseus_chok1gshd
ENSGAGG00000000375	RRP1B	100	47.059	ENSCGRG00001010889	-	100	46.310	Cricetulus_griseus_chok1gshd
ENSGAGG00000000375	RRP1B	97	45.229	ENSCGRG00000001553	Rrp1b	99	44.343	Cricetulus_griseus_crigri
ENSGAGG00000000375	RRP1B	53	52.956	ENSCGRG00000008915	Rrp1	79	57.880	Cricetulus_griseus_crigri
ENSGAGG00000000375	RRP1B	57	56.044	ENSCSEG00000020711	-	76	56.044	Cynoglossus_semilaevis
ENSGAGG00000000375	RRP1B	50	49.482	ENSCVAG00000017568	-	92	51.648	Cyprinodon_variegatus
ENSGAGG00000000375	RRP1B	59	50.112	ENSDNOG00000019880	RRP1	78	57.925	Dasypus_novemcinctus
ENSGAGG00000000375	RRP1B	88	55.897	ENSDNOG00000032774	RRP1B	100	49.559	Dasypus_novemcinctus
ENSGAGG00000000375	RRP1B	93	68.605	ENSETEG00000019489	RRP1B	59	70.930	Echinops_telfairi
ENSGAGG00000000375	RRP1B	52	52.239	ENSEASG00005001673	RRP1	77	59.238	Equus_asinus_asinus
ENSGAGG00000000375	RRP1B	100	51.592	ENSEASG00005001687	RRP1B	100	51.465	Equus_asinus_asinus
ENSGAGG00000000375	RRP1B	100	51.995	ENSECAG00000018018	RRP1B	100	51.465	Equus_caballus
ENSGAGG00000000375	RRP1B	52	52.985	ENSECAG00000015703	RRP1	77	60.117	Equus_caballus
ENSGAGG00000000375	RRP1B	63	57.377	ENSELUG00000015885	-	88	51.863	Esox_lucius
ENSGAGG00000000375	RRP1B	56	51.415	ENSFCAG00000008434	RRP1	76	58.892	Felis_catus
ENSGAGG00000000375	RRP1B	92	62.410	ENSFALG00000002024	RRP1B	100	61.119	Ficedula_albicollis
ENSGAGG00000000375	RRP1B	59	50.000	ENSFDAG00000013728	RRP1	76	58.601	Fukomys_damarensis
ENSGAGG00000000375	RRP1B	60	50.284	ENSFHEG00000016314	-	51	51.064	Fundulus_heteroclitus
ENSGAGG00000000375	RRP1B	62	51.818	ENSGMOG00000001953	-	67	51.818	Gadus_morhua
ENSGAGG00000000375	RRP1B	100	65.924	ENSGALG00000035696	RRP1B	100	65.703	Gallus_gallus
ENSGAGG00000000375	RRP1B	99	39.164	ENSGACG00000001438	rrp1	77	51.695	Gasterosteus_aculeatus
ENSGAGG00000000375	RRP1B	100	51.861	ENSGGOG00000012069	RRP1B	100	50.834	Gorilla_gorilla
ENSGAGG00000000375	RRP1B	75	52.616	ENSHGLG00100002232	RRP1B	66	55.375	Heterocephalus_glaber_male
ENSGAGG00000000375	RRP1B	60	49.194	ENSIPUG00000000673	-	72	48.421	Ictalurus_punctatus
ENSGAGG00000000375	RRP1B	52	55.138	ENSSTOG00000011116	RRP1	76	60.778	Ictidomys_tridecemlineatus
ENSGAGG00000000375	RRP1B	99	47.327	ENSSTOG00000011790	RRP1B	96	48.129	Ictidomys_tridecemlineatus
ENSGAGG00000000375	RRP1B	100	42.697	ENSJJAG00000021279	Rrp1b	100	42.857	Jaculus_jaculus
ENSGAGG00000000375	RRP1B	63	50.857	ENSKMAG00000005539	rrp1	81	51.613	Kryptolebias_marmoratus
ENSGAGG00000000375	RRP1B	88	44.813	ENSLAFG00000000766	RRP1B	85	65.301	Loxodonta_africana
ENSGAGG00000000375	RRP1B	51	54.987	ENSMFAG00000003202	RRP1	73	59.172	Macaca_fascicularis
ENSGAGG00000000375	RRP1B	100	51.285	ENSMFAG00000039152	RRP1B	100	51.157	Macaca_fascicularis
ENSGAGG00000000375	RRP1B	100	50.000	ENSMMUG00000000104	RRP1B	100	49.871	Macaca_mulatta
ENSGAGG00000000375	RRP1B	100	51.542	ENSMNEG00000034269	RRP1B	100	51.414	Macaca_nemestrina
ENSGAGG00000000375	RRP1B	58	49.664	ENSMNEG00000031210	RRP1	73	59.412	Macaca_nemestrina
ENSGAGG00000000375	RRP1B	94	50.817	ENSMLEG00000040044	RRP1B	99	50.681	Mandrillus_leucophaeus
ENSGAGG00000000375	RRP1B	100	64.915	ENSMGAG00000014591	RRP1B	100	65.309	Meleagris_gallopavo
ENSGAGG00000000375	RRP1B	53	44.691	ENSMAUG00000017653	Rrp1	76	48.276	Mesocricetus_auratus
ENSGAGG00000000375	RRP1B	52	54.839	ENSMICG00000004700	RRP1	78	58.772	Microcebus_murinus
ENSGAGG00000000375	RRP1B	80	67.188	ENSMICG00000004686	RRP1B	100	50.771	Microcebus_murinus
ENSGAGG00000000375	RRP1B	59	42.596	ENSMOCG00000015687	Rrp1	84	47.783	Microtus_ochrogaster
ENSGAGG00000000375	RRP1B	57	50.964	ENSMODG00000021036	-	52	61.383	Monodelphis_domestica
ENSGAGG00000000375	RRP1B	100	56.427	ENSMODG00000021033	RRP1B	100	56.923	Monodelphis_domestica
ENSGAGG00000000375	RRP1B	99	45.700	MGP_CAROLIEiJ_G0021376	Rrp1b	99	46.354	Mus_caroli
ENSGAGG00000000375	RRP1B	99	45.644	ENSMUSG00000058392	Rrp1b	99	45.232	Mus_musculus
ENSGAGG00000000375	RRP1B	100	45.338	MGP_PahariEiJ_G0023695	Rrp1b	100	44.828	Mus_pahari
ENSGAGG00000000375	RRP1B	84	45.107	ENSMPUG00000009810	RRP1B	99	43.645	Mustela_putorius_furo
ENSGAGG00000000375	RRP1B	99	51.546	ENSMLUG00000007738	RRP1B	99	50.573	Myotis_lucifugus
ENSGAGG00000000375	RRP1B	99	45.982	ENSNGAG00000021073	Rrp1b	99	45.085	Nannospalax_galili
ENSGAGG00000000375	RRP1B	54	40.347	ENSNGAG00000022344	Rrp1	81	43.182	Nannospalax_galili
ENSGAGG00000000375	RRP1B	100	50.841	ENSNLEG00000001490	RRP1B	100	50.712	Nomascus_leucogenys
ENSGAGG00000000375	RRP1B	74	80.165	ENSMEUG00000003226	-	89	80.165	Notamacropus_eugenii
ENSGAGG00000000375	RRP1B	100	42.386	ENSODEG00000013177	RRP1B	79	57.522	Octodon_degus
ENSGAGG00000000375	RRP1B	99	50.130	ENSOANG00000006470	RRP1B	99	52.016	Ornithorhynchus_anatinus
ENSGAGG00000000375	RRP1B	94	40.083	ENSOCUG00000025931	RRP1B	69	54.110	Oryctolagus_cuniculus
ENSGAGG00000000375	RRP1B	67	50.811	ENSORLG00020007199	-	62	52.747	Oryzias_latipes_hni
ENSGAGG00000000375	RRP1B	67	51.081	ENSORLG00015004425	-	62	53.022	Oryzias_latipes_hsok
ENSGAGG00000000375	RRP1B	64	51.226	ENSOMEG00000016910	-	66	52.473	Oryzias_melastigma
ENSGAGG00000000375	RRP1B	64	64.075	ENSOGAG00000009872	RRP1B	72	64.957	Otolemur_garnettii
ENSGAGG00000000375	RRP1B	94	50.609	ENSPPAG00000035319	RRP1B	99	49.458	Pan_paniscus
ENSGAGG00000000375	RRP1B	63	62.500	ENSPTIG00000016894	RRP1B	78	62.500	Panthera_tigris_altaica
ENSGAGG00000000375	RRP1B	51	44.810	ENSPTIG00000019473	RRP1	70	53.226	Panthera_tigris_altaica
ENSGAGG00000000375	RRP1B	100	51.786	ENSPTRG00000013958	RRP1B	100	50.765	Pan_troglodytes
ENSGAGG00000000375	RRP1B	100	51.733	ENSPANG00000011090	RRP1B	100	51.733	Papio_anubis
ENSGAGG00000000375	RRP1B	99	87.251	ENSPSIG00000008152	RRP1B	96	87.008	Pelodiscus_sinensis
ENSGAGG00000000375	RRP1B	53	53.317	ENSPEMG00000018421	Rrp1	79	58.621	Peromyscus_maniculatus_bairdii
ENSGAGG00000000375	RRP1B	100	46.263	ENSPEMG00000022490	Rrp1b	100	45.758	Peromyscus_maniculatus_bairdii
ENSGAGG00000000375	RRP1B	71	48.174	ENSPCIG00000015523	-	76	63.112	Phascolarctos_cinereus
ENSGAGG00000000375	RRP1B	100	57.584	ENSPCIG00000015513	RRP1B	100	58.056	Phascolarctos_cinereus
ENSGAGG00000000375	RRP1B	71	49.505	ENSPREG00000015673	-	63	51.791	Poecilia_reticulata
ENSGAGG00000000375	RRP1B	100	52.246	ENSPPYG00000011470	RRP1B	100	50.963	Pongo_abelii
ENSGAGG00000000375	RRP1B	85	82.105	ENSPCAG00000013723	RRP1B	91	82.105	Procavia_capensis
ENSGAGG00000000375	RRP1B	100	48.010	ENSRBIG00000041689	RRP1B	100	47.882	Rhinopithecus_bieti
ENSGAGG00000000375	RRP1B	55	53.828	ENSRBIG00000032082	RRP1	73	60.411	Rhinopithecus_bieti
ENSGAGG00000000375	RRP1B	100	51.990	ENSRROG00000031499	RRP1B	100	51.861	Rhinopithecus_roxellana
ENSGAGG00000000375	RRP1B	52	53.964	ENSSBOG00000034689	RRP1	74	59.281	Saimiri_boliviensis_boliviensis
ENSGAGG00000000375	RRP1B	94	47.763	ENSSBOG00000034727	RRP1B	99	48.026	Saimiri_boliviensis_boliviensis
ENSGAGG00000000375	RRP1B	100	57.455	ENSSHAG00000017789	RRP1B	100	58.184	Sarcophilus_harrisii
ENSGAGG00000000375	RRP1B	64	50.806	ENSSMAG00000016847	-	86	49.587	Scophthalmus_maximus
ENSGAGG00000000375	RRP1B	62	52.162	ENSSDUG00000000551	-	60	52.316	Seriola_dumerili
ENSGAGG00000000375	RRP1B	62	52.162	ENSSLDG00000002538	-	60	52.316	Seriola_lalandi_dorsalis
ENSGAGG00000000375	RRP1B	55	57.348	ENSSARG00000003108	-	63	57.348	Sorex_araneus
ENSGAGG00000000375	RRP1B	100	63.368	ENSSPUG00000002834	RRP1B	100	63.496	Sphenodon_punctatus
ENSGAGG00000000375	RRP1B	63	49.606	ENSSPAG00000005370	-	58	50.398	Stegastes_partitus
ENSGAGG00000000375	RRP1B	50	53.543	ENSSSCG00000037061	RRP1	81	55.679	Sus_scrofa
ENSGAGG00000000375	RRP1B	60	65.000	ENSSSCG00000021698	RRP1B	100	44.814	Sus_scrofa
ENSGAGG00000000375	RRP1B	94	62.570	ENSTGUG00000005926	RRP1B	100	62.849	Taeniopygia_guttata
ENSGAGG00000000375	RRP1B	71	46.000	ENSTNIG00000005053	rrp1	76	52.778	Tetraodon_nigroviridis
ENSGAGG00000000375	RRP1B	74	63.343	ENSTBEG00000000422	RRP1B	87	64.506	Tupaia_belangeri
ENSGAGG00000000375	RRP1B	100	45.725	ENSTTRG00000000723	RRP1B	100	46.976	Tursiops_truncatus
ENSGAGG00000000375	RRP1B	80	59.502	ENSUAMG00000026765	RRP1B	100	48.638	Ursus_americanus
ENSGAGG00000000375	RRP1B	62	61.696	ENSUMAG00000025510	RRP1B	88	62.305	Ursus_maritimus
ENSGAGG00000000375	RRP1B	94	48.370	ENSVVUG00000024509	RRP1B	99	47.619	Vulpes_vulpes
ENSGAGG00000000375	RRP1B	60	54.711	ENSXETG00000013683	rrp1b	72	54.711	Xenopus_tropicalis
ENSGAGG00000000375	RRP1B	66	51.075	ENSXMAG00000023123	-	63	51.762	Xiphophorus_maculatus