EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000000642 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 4470 bases
Position: chrPPEB01001402.1:309915-314384
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000000755	GTP_EFTU	PF00009.27	5.7e-54	1	1
ENSGAGP00000000755	GTP_EFTU_D2	PF03144.25	4.8e-13	1	1
ENSGAGP00000000755	GTP_EFTU_D3	PF03143.17	1.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000000853	-	1802	-	ENSGAGP00000000755	461 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000000642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000000642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000000642	-	99	91.087	ENSGAGG00000010850	-	99	91.087
ENSGAGG00000000642	-	95	37.557	ENSGAGG00000016315	GSPT1	68	37.557
ENSGAGG00000000642	-	100	95.445	ENSGAGG00000000648	-	100	95.445
ENSGAGG00000000642	-	99	69.451	ENSGAGG00000007724	-	96	77.143
ENSGAGG00000000642	-	95	38.462	ENSGAGG00000002033	HBS1L	62	38.462
ENSGAGG00000000642	-	99	90.217	ENSGAGG00000008805	EEF1A2	99	90.736

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000000642	-	67	85.993	ENSAPOG00000004757	eef1a1l1	99	100.000	Acanthochromis_polyacanthus
ENSGAGG00000000642	-	100	86.768	ENSAMEG00000009677	-	100	86.768	Ailuropoda_melanoleuca
ENSGAGG00000000642	-	100	80.477	ENSAMEG00000004317	-	100	80.477	Ailuropoda_melanoleuca
ENSGAGG00000000642	-	100	87.419	ENSCAFG00000013249	-	100	87.419	Canis_familiaris
ENSGAGG00000000642	-	100	87.419	ENSCAFG00020020007	-	100	87.419	Canis_lupus_dingo
ENSGAGG00000000642	-	100	95.879	ENSCPBG00000000646	-	100	95.879	Chrysemys_picta_bellii
ENSGAGG00000000642	-	100	98.698	ENSCPBG00000000748	-	100	98.698	Chrysemys_picta_bellii
ENSGAGG00000000642	-	99	90.870	ENSDARG00000020850	eef1a1l1	99	90.870	Danio_rerio
ENSGAGG00000000642	-	85	84.518	ENSEASG00005018013	-	99	84.518	Equus_asinus_asinus
ENSGAGG00000000642	-	98	89.207	ENSEASG00005012365	-	96	90.284	Equus_asinus_asinus
ENSGAGG00000000642	-	100	87.419	ENSECAG00000022260	-	100	87.419	Equus_caballus
ENSGAGG00000000642	-	100	89.805	ENSELUG00000023536	eef1a1l1	100	89.805	Esox_lucius
ENSGAGG00000000642	-	100	89.588	ENSFCAG00000030530	-	100	89.588	Felis_catus
ENSGAGG00000000642	-	90	86.925	ENSLBEG00000002790	eef1a1l1	99	86.925	Labrus_bergylta
ENSGAGG00000000642	-	100	89.371	ENSLAFG00000028081	-	99	89.371	Loxodonta_africana
ENSGAGG00000000642	-	100	90.239	ENSLAFG00000025161	-	100	90.239	Loxodonta_africana
ENSGAGG00000000642	-	75	93.064	ENSOANG00000012066	-	100	93.064	Ornithorhynchus_anatinus
ENSGAGG00000000642	-	90	88.620	ENSOMEG00000006888	-	99	88.620	Oryzias_melastigma
ENSGAGG00000000642	-	100	90.022	ENSOARG00000002943	-	100	90.022	Ovis_aries
ENSGAGG00000000642	-	100	86.334	ENSPPRG00000008525	-	100	86.334	Panthera_pardus
ENSGAGG00000000642	-	97	90.112	ENSPPRG00000005678	-	95	90.112	Panthera_pardus
ENSGAGG00000000642	-	100	88.286	ENSPTIG00000006939	-	100	88.286	Panthera_tigris_altaica
ENSGAGG00000000642	-	100	95.011	ENSPSIG00000008610	-	100	95.011	Pelodiscus_sinensis
ENSGAGG00000000642	-	66	98.148	ENSPVAG00000007682	-	65	98.148	Pteropus_vampyrus
ENSGAGG00000000642	-	100	81.128	ENSSMAG00000018455	-	99	81.128	Scophthalmus_maximus
ENSGAGG00000000642	-	100	94.360	ENSSPUG00000003655	-	100	94.360	Sphenodon_punctatus
ENSGAGG00000000642	-	98	84.513	ENSSSCG00000038035	-	100	84.165	Sus_scrofa
ENSGAGG00000000642	-	100	91.106	ENSSSCG00000034113	-	100	91.106	Sus_scrofa
ENSGAGG00000000642	-	100	77.223	ENSUAMG00000007676	-	100	77.223	Ursus_americanus
ENSGAGG00000000642	-	100	85.033	ENSUAMG00000008928	-	100	85.033	Ursus_americanus
ENSGAGG00000000642	-	51	82.979	ENSUAMG00000006085	-	98	82.979	Ursus_americanus
ENSGAGG00000000642	-	100	86.768	ENSUMAG00000013211	-	100	86.768	Ursus_maritimus
ENSGAGG00000000642	-	100	87.202	ENSVVUG00000026886	-	100	87.202	Vulpes_vulpes
ENSGAGG00000000642	-	100	90.239	ENSXETG00000022604	eef1a1o	100	90.239	Xenopus_tropicalis