EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000000646 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 261 bases
Position: chrPPEB01001985.1:6401-6661
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000000769	SF3b10	PF07189.11	4.2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000000867	-	261	-	ENSGAGP00000000769	86 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000000646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000000646's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000000646	-	100	94.186	ENSGAGG00000011434	SF3B5	100	94.186

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000000646	-	100	93.023	ENSG00000169976	SF3B5	100	93.023	Homo_sapiens
ENSGAGG00000000646	-	100	86.047	ENSAPOG00000001721	sf3b5	100	86.047	Acanthochromis_polyacanthus
ENSGAGG00000000646	-	100	88.372	ENSACIG00000008106	sf3b5	100	88.372	Amphilophus_citrinellus
ENSGAGG00000000646	-	100	86.047	ENSAOCG00000023367	sf3b5	100	86.047	Amphiprion_ocellaris
ENSGAGG00000000646	-	100	86.047	ENSAPEG00000004605	sf3b5	100	86.047	Amphiprion_percula
ENSGAGG00000000646	-	100	87.209	ENSATEG00000009720	sf3b5	100	87.209	Anabas_testudineus
ENSGAGG00000000646	-	100	91.860	ENSACAG00000007948	SF3B5	100	91.860	Anolis_carolinensis
ENSGAGG00000000646	-	100	93.023	ENSANAG00000019999	SF3B5	100	93.023	Aotus_nancymaae
ENSGAGG00000000646	-	100	88.372	ENSACLG00000022410	sf3b5	100	88.372	Astatotilapia_calliptera
ENSGAGG00000000646	-	100	93.023	ENSBTAG00000009795	SF3B5	100	93.023	Bos_taurus
ENSGAGG00000000646	-	100	93.023	ENSCJAG00000046566	SF3B5	100	93.023	Callithrix_jacchus
ENSGAGG00000000646	-	100	93.023	ENSCAFG00000032495	SF3B5	100	93.023	Canis_familiaris
ENSGAGG00000000646	-	100	93.023	ENSCAFG00020000873	SF3B5	100	93.023	Canis_lupus_dingo
ENSGAGG00000000646	-	100	93.023	ENSCHIG00000007987	SF3B5	100	93.023	Capra_hircus
ENSGAGG00000000646	-	100	93.023	ENSTSYG00000012236	SF3B5	100	93.023	Carlito_syrichta
ENSGAGG00000000646	-	100	93.023	ENSCPOG00000012435	SF3B5	100	93.023	Cavia_porcellus
ENSGAGG00000000646	-	100	93.023	ENSCCAG00000006528	SF3B5	100	93.023	Cebus_capucinus
ENSGAGG00000000646	-	100	93.023	ENSCATG00000010192	SF3B5	100	93.023	Cercocebus_atys
ENSGAGG00000000646	-	100	93.023	ENSCLAG00000017802	SF3B5	100	93.023	Chinchilla_lanigera
ENSGAGG00000000646	-	100	93.023	ENSCSAG00000000187	SF3B5	100	93.023	Chlorocebus_sabaeus
ENSGAGG00000000646	-	100	94.186	ENSCPBG00000017148	SF3B5	100	94.186	Chrysemys_picta_bellii
ENSGAGG00000000646	-	97	71.084	ENSCING00000021953	-	97	71.084	Ciona_intestinalis
ENSGAGG00000000646	-	100	93.023	ENSCANG00000002639	SF3B5	100	93.023	Colobus_angolensis_palliatus
ENSGAGG00000000646	-	100	91.860	ENSCGRG00001007249	Sf3b5	100	91.860	Cricetulus_griseus_chok1gshd
ENSGAGG00000000646	-	100	91.860	ENSCGRG00000019185	Sf3b5	100	91.860	Cricetulus_griseus_crigri
ENSGAGG00000000646	-	100	88.372	ENSCSEG00000003216	sf3b5	100	88.372	Cynoglossus_semilaevis
ENSGAGG00000000646	-	100	87.209	ENSCVAG00000005040	sf3b5	100	87.209	Cyprinodon_variegatus
ENSGAGG00000000646	-	100	89.535	ENSDARG00000016855	sf3b5	100	89.535	Danio_rerio
ENSGAGG00000000646	-	100	93.023	ENSDNOG00000048829	SF3B5	82	93.023	Dasypus_novemcinctus
ENSGAGG00000000646	-	100	93.023	ENSDORG00000005838	Sf3b5	100	93.023	Dipodomys_ordii
ENSGAGG00000000646	-	99	77.647	FBgn0040534	Sf3b5	100	77.647	Drosophila_melanogaster
ENSGAGG00000000646	-	100	93.023	ENSETEG00000004047	SF3B5	100	93.023	Echinops_telfairi
ENSGAGG00000000646	-	92	82.278	ENSEBUG00000002311	sf3b5	93	82.278	Eptatretus_burgeri
ENSGAGG00000000646	-	100	93.023	ENSEASG00005009522	SF3B5	100	93.023	Equus_asinus_asinus
ENSGAGG00000000646	-	100	93.023	ENSECAG00000005457	SF3B5	100	93.023	Equus_caballus
ENSGAGG00000000646	-	100	86.047	ENSELUG00000014290	SF3B5	100	86.047	Esox_lucius
ENSGAGG00000000646	-	100	93.023	ENSFCAG00000000936	SF3B5	100	93.023	Felis_catus
ENSGAGG00000000646	-	100	90.698	ENSFALG00000015012	SF3B5	100	90.698	Ficedula_albicollis
ENSGAGG00000000646	-	100	93.023	ENSFDAG00000003664	SF3B5	100	93.023	Fukomys_damarensis
ENSGAGG00000000646	-	100	87.209	ENSFHEG00000020301	sf3b5	100	87.209	Fundulus_heteroclitus
ENSGAGG00000000646	-	100	87.209	ENSGMOG00000019972	sf3b5	100	87.209	Gadus_morhua
ENSGAGG00000000646	-	100	93.023	ENSGALG00000030824	SF3B5	100	93.023	Gallus_gallus
ENSGAGG00000000646	-	100	87.209	ENSGAFG00000000271	sf3b5	100	87.209	Gambusia_affinis
ENSGAGG00000000646	-	100	87.209	ENSGACG00000010363	sf3b5	100	87.209	Gasterosteus_aculeatus
ENSGAGG00000000646	-	100	93.023	ENSGGOG00000001537	SF3B5	100	93.023	Gorilla_gorilla
ENSGAGG00000000646	-	100	88.372	ENSHBUG00000008925	sf3b5	100	88.372	Haplochromis_burtoni
ENSGAGG00000000646	-	100	93.023	ENSHGLG00000021406	SF3B5	100	93.023	Heterocephalus_glaber_female
ENSGAGG00000000646	-	100	93.023	ENSHGLG00100020370	SF3B5	100	93.023	Heterocephalus_glaber_male
ENSGAGG00000000646	-	100	86.047	ENSHCOG00000009115	-	100	86.047	Hippocampus_comes
ENSGAGG00000000646	-	100	86.047	ENSHCOG00000016802	sf3b5	100	86.047	Hippocampus_comes
ENSGAGG00000000646	-	100	86.047	ENSHCOG00000016806	sf3b5	100	86.047	Hippocampus_comes
ENSGAGG00000000646	-	100	88.372	ENSIPUG00000015166	sf3b5	100	88.372	Ictalurus_punctatus
ENSGAGG00000000646	-	100	93.023	ENSSTOG00000003347	SF3B5	100	93.023	Ictidomys_tridecemlineatus
ENSGAGG00000000646	-	100	93.023	ENSJJAG00000001857	Sf3b5	100	93.023	Jaculus_jaculus
ENSGAGG00000000646	-	100	87.209	ENSKMAG00000002249	sf3b5	100	87.209	Kryptolebias_marmoratus
ENSGAGG00000000646	-	100	87.209	ENSLBEG00000019847	sf3b5	100	87.209	Labrus_bergylta
ENSGAGG00000000646	-	100	90.698	ENSLACG00000000946	SF3B5	100	90.698	Latimeria_chalumnae
ENSGAGG00000000646	-	100	87.209	ENSLOCG00000017352	sf3b5	100	87.209	Lepisosteus_oculatus
ENSGAGG00000000646	-	100	93.023	ENSLAFG00000032489	SF3B5	100	93.023	Loxodonta_africana
ENSGAGG00000000646	-	100	93.023	ENSMFAG00000029753	SF3B5	100	93.023	Macaca_fascicularis
ENSGAGG00000000646	-	100	93.023	ENSMMUG00000047691	SF3B5	100	93.023	Macaca_mulatta
ENSGAGG00000000646	-	100	93.023	ENSMNEG00000028236	SF3B5	100	93.023	Macaca_nemestrina
ENSGAGG00000000646	-	100	93.023	ENSMLEG00000007622	SF3B5	100	93.023	Mandrillus_leucophaeus
ENSGAGG00000000646	-	100	88.372	ENSMAMG00000021639	sf3b5	100	88.372	Mastacembelus_armatus
ENSGAGG00000000646	-	100	88.372	ENSMZEG00005028115	SF3B5	100	88.372	Maylandia_zebra
ENSGAGG00000000646	-	100	76.744	ENSMZEG00005027407	sf3b5	100	76.744	Maylandia_zebra
ENSGAGG00000000646	-	100	88.372	ENSMZEG00005027408	sf3b5	100	88.372	Maylandia_zebra
ENSGAGG00000000646	-	100	93.023	ENSMGAG00000015849	SF3B5	100	93.023	Meleagris_gallopavo
ENSGAGG00000000646	-	100	91.860	ENSMAUG00000008283	Sf3b5	100	91.860	Mesocricetus_auratus
ENSGAGG00000000646	-	100	93.023	ENSMICG00000014922	SF3B5	100	93.023	Microcebus_murinus
ENSGAGG00000000646	-	100	91.860	ENSMOCG00000001713	Sf3b5	100	91.860	Microtus_ochrogaster
ENSGAGG00000000646	-	100	88.372	ENSMMOG00000007956	sf3b5	100	88.372	Mola_mola
ENSGAGG00000000646	-	100	93.023	ENSMODG00000023291	SF3B5	83	93.023	Monodelphis_domestica
ENSGAGG00000000646	-	90	92.208	ENSMALG00000020357	sf3b5	94	92.208	Monopterus_albus
ENSGAGG00000000646	-	100	91.860	MGP_CAROLIEiJ_G0015120	Sf3b5	100	91.860	Mus_caroli
ENSGAGG00000000646	-	100	91.860	ENSMUSG00000078348	Sf3b5	100	91.860	Mus_musculus
ENSGAGG00000000646	-	100	91.860	MGP_PahariEiJ_G0023739	Sf3b5	100	91.860	Mus_pahari
ENSGAGG00000000646	-	100	91.860	MGP_SPRETEiJ_G0015928	Sf3b5	100	91.860	Mus_spretus
ENSGAGG00000000646	-	100	93.023	ENSMPUG00000018379	SF3B5	100	93.023	Mustela_putorius_furo
ENSGAGG00000000646	-	100	88.372	ENSMLUG00000010802	-	100	88.372	Myotis_lucifugus
ENSGAGG00000000646	-	100	93.023	ENSMLUG00000028504	-	100	93.023	Myotis_lucifugus
ENSGAGG00000000646	-	93	90.000	ENSMLUG00000025546	-	93	90.000	Myotis_lucifugus
ENSGAGG00000000646	-	100	93.023	ENSNGAG00000010732	Sf3b5	100	93.023	Nannospalax_galili
ENSGAGG00000000646	-	100	88.372	ENSNBRG00000014383	sf3b5	100	88.372	Neolamprologus_brichardi
ENSGAGG00000000646	-	100	93.023	ENSNLEG00000019307	SF3B5	100	93.023	Nomascus_leucogenys
ENSGAGG00000000646	-	100	93.023	ENSMEUG00000005445	-	100	93.023	Notamacropus_eugenii
ENSGAGG00000000646	-	100	93.023	ENSMEUG00000005440	-	100	93.023	Notamacropus_eugenii
ENSGAGG00000000646	-	100	91.860	ENSOPRG00000015107	SF3B5	100	91.860	Ochotona_princeps
ENSGAGG00000000646	-	100	93.023	ENSODEG00000019507	SF3B5	100	93.023	Octodon_degus
ENSGAGG00000000646	-	100	88.372	ENSONIG00000020725	sf3b5	100	88.372	Oreochromis_niloticus
ENSGAGG00000000646	-	69	93.220	ENSOANG00000015301	SF3B5	97	93.220	Ornithorhynchus_anatinus
ENSGAGG00000000646	-	100	93.023	ENSOCUG00000008752	SF3B5	100	93.023	Oryctolagus_cuniculus
ENSGAGG00000000646	-	100	88.372	ENSORLG00000004925	sf3b5	100	88.372	Oryzias_latipes
ENSGAGG00000000646	-	100	88.372	ENSORLG00020011625	sf3b5	100	88.372	Oryzias_latipes_hni
ENSGAGG00000000646	-	100	88.372	ENSORLG00015017061	sf3b5	100	88.372	Oryzias_latipes_hsok
ENSGAGG00000000646	-	100	88.372	ENSOMEG00000010620	sf3b5	100	88.372	Oryzias_melastigma
ENSGAGG00000000646	-	100	93.023	ENSOGAG00000012152	SF3B5	100	93.023	Otolemur_garnettii
ENSGAGG00000000646	-	94	91.358	ENSOARG00000019486	-	98	91.358	Ovis_aries
ENSGAGG00000000646	-	100	89.535	ENSOARG00000002617	SF3B5	100	89.535	Ovis_aries
ENSGAGG00000000646	-	100	93.023	ENSPPAG00000012940	SF3B5	100	93.023	Pan_paniscus
ENSGAGG00000000646	-	100	93.023	ENSPPRG00000021262	SF3B5	100	93.023	Panthera_pardus
ENSGAGG00000000646	-	100	93.023	ENSPTIG00000001952	SF3B5	100	93.023	Panthera_tigris_altaica
ENSGAGG00000000646	-	100	93.023	ENSPTRG00000018676	SF3B5	100	93.023	Pan_troglodytes
ENSGAGG00000000646	-	100	93.023	ENSPANG00000034242	SF3B5	100	93.023	Papio_anubis
ENSGAGG00000000646	-	100	87.209	ENSPKIG00000006057	sf3b5	100	87.209	Paramormyrops_kingsleyae
ENSGAGG00000000646	-	100	94.186	ENSPSIG00000001262	SF3B5	100	94.186	Pelodiscus_sinensis
ENSGAGG00000000646	-	100	86.047	ENSPMGG00000014804	sf3b5	100	86.047	Periophthalmus_magnuspinnatus
ENSGAGG00000000646	-	100	91.860	ENSPEMG00000012931	Sf3b5	100	91.860	Peromyscus_maniculatus_bairdii
ENSGAGG00000000646	-	100	83.721	ENSPMAG00000010296	sf3b5	100	83.721	Petromyzon_marinus
ENSGAGG00000000646	-	100	74.419	ENSPCIG00000025007	-	100	74.419	Phascolarctos_cinereus
ENSGAGG00000000646	-	93	95.000	ENSPCIG00000011344	-	78	95.000	Phascolarctos_cinereus
ENSGAGG00000000646	-	100	87.209	ENSPFOG00000019994	sf3b5	100	87.209	Poecilia_formosa
ENSGAGG00000000646	-	100	87.209	ENSPLAG00000008412	sf3b5	100	87.209	Poecilia_latipinna
ENSGAGG00000000646	-	100	87.209	ENSPMEG00000020050	sf3b5	100	87.209	Poecilia_mexicana
ENSGAGG00000000646	-	100	87.209	ENSPREG00000009242	sf3b5	100	87.209	Poecilia_reticulata
ENSGAGG00000000646	-	100	93.023	ENSPPYG00000017068	SF3B5	100	93.023	Pongo_abelii
ENSGAGG00000000646	-	100	93.023	ENSPCAG00000009332	SF3B5	100	93.023	Procavia_capensis
ENSGAGG00000000646	-	100	93.023	ENSPCOG00000013754	SF3B5	100	93.023	Propithecus_coquereli
ENSGAGG00000000646	-	56	95.833	ENSPVAG00000002820	SF3B5	100	95.833	Pteropus_vampyrus
ENSGAGG00000000646	-	100	88.372	ENSPNYG00000002075	sf3b5	100	88.372	Pundamilia_nyererei
ENSGAGG00000000646	-	100	89.535	ENSPNAG00000004942	sf3b5	100	89.535	Pygocentrus_nattereri
ENSGAGG00000000646	-	100	91.860	ENSRNOG00000014908	Sf3b5	100	91.860	Rattus_norvegicus
ENSGAGG00000000646	-	100	93.023	ENSRBIG00000006301	SF3B5	100	93.023	Rhinopithecus_bieti
ENSGAGG00000000646	-	100	93.023	ENSRROG00000037067	SF3B5	100	93.023	Rhinopithecus_roxellana
ENSGAGG00000000646	-	100	93.023	ENSSBOG00000006122	SF3B5	100	93.023	Saimiri_boliviensis_boliviensis
ENSGAGG00000000646	-	100	91.860	ENSSHAG00000015670	SF3B5	100	91.860	Sarcophilus_harrisii
ENSGAGG00000000646	-	100	88.372	ENSSFOG00015015767	sf3b5	100	88.372	Scleropages_formosus
ENSGAGG00000000646	-	100	86.047	ENSSMAG00000018852	sf3b5	100	86.047	Scophthalmus_maximus
ENSGAGG00000000646	-	100	87.209	ENSSDUG00000018161	sf3b5	100	87.209	Seriola_dumerili
ENSGAGG00000000646	-	100	87.209	ENSSLDG00000014547	sf3b5	100	87.209	Seriola_lalandi_dorsalis
ENSGAGG00000000646	-	100	93.023	ENSSARG00000007820	SF3B5	100	93.023	Sorex_araneus
ENSGAGG00000000646	-	100	86.047	ENSSPAG00000017371	-	100	86.047	Stegastes_partitus
ENSGAGG00000000646	-	100	86.047	ENSSPAG00000009244	sf3b5	100	86.047	Stegastes_partitus
ENSGAGG00000000646	-	100	93.023	ENSSSCG00000035578	SF3B5	100	93.023	Sus_scrofa
ENSGAGG00000000646	-	100	93.023	ENSTGUG00000010810	SF3B5	100	93.023	Taeniopygia_guttata
ENSGAGG00000000646	-	100	87.209	ENSTRUG00000005577	sf3b5	100	87.209	Takifugu_rubripes
ENSGAGG00000000646	-	100	87.209	ENSTNIG00000001265	sf3b5	100	87.209	Tetraodon_nigroviridis
ENSGAGG00000000646	-	100	91.860	ENSTBEG00000003072	SF3B5	100	91.860	Tupaia_belangeri
ENSGAGG00000000646	-	100	93.023	ENSTTRG00000008817	SF3B5	100	93.023	Tursiops_truncatus
ENSGAGG00000000646	-	100	93.023	ENSUAMG00000027296	SF3B5	100	93.023	Ursus_americanus
ENSGAGG00000000646	-	100	93.023	ENSUMAG00000005448	SF3B5	100	93.023	Ursus_maritimus
ENSGAGG00000000646	-	100	93.023	ENSVPAG00000003826	SF3B5	100	93.023	Vicugna_pacos
ENSGAGG00000000646	-	100	93.023	ENSVVUG00000004703	SF3B5	100	93.023	Vulpes_vulpes
ENSGAGG00000000646	-	100	90.698	ENSXETG00000021409	sf3b5	100	90.698	Xenopus_tropicalis
ENSGAGG00000000646	-	100	87.209	ENSXMAG00000019971	sf3b5	100	87.209	Xiphophorus_maculatus