EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000000742 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 7192 bases
Position: chrPPEB01011502.1:479-7670
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000000895	GTP_EFTU	PF00009.27	3.7e-07	1	1
ENSGAGP00000000895	MMR_HSR1	PF01926.23	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000001015	-	1578	-	ENSGAGP00000000895	201 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000000742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000000742's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000000742	-	84	49.123	ENSGAGG00000008447	RAB39B	80	49.123
ENSGAGG00000000742	-	93	46.032	ENSGAGG00000013139	RAB19	85	45.989
ENSGAGG00000000742	-	80	38.272	ENSGAGG00000011790	-	86	38.272
ENSGAGG00000000742	-	80	30.769	ENSGAGG00000015067	RASL11A	71	30.769
ENSGAGG00000000742	-	73	32.653	ENSGAGG00000024365	ARL3	83	31.973
ENSGAGG00000000742	-	89	55.866	ENSGAGG00000017207	RAB35	89	55.866
ENSGAGG00000000742	-	79	44.304	ENSGAGG00000021701	RAB6A	76	44.304
ENSGAGG00000000742	-	98	42.132	ENSGAGG00000005606	RAB2A	80	47.337
ENSGAGG00000000742	-	84	36.207	ENSGAGG00000021838	RERG	84	36.207
ENSGAGG00000000742	-	96	44.792	ENSGAGG00000023041	RAB2B	81	47.701
ENSGAGG00000000742	-	88	39.572	ENSGAGG00000025340	RAB36	70	39.572
ENSGAGG00000000742	-	95	36.224	ENSGAGG00000017981	RAB9A	97	36.364
ENSGAGG00000000742	-	95	35.437	ENSGAGG00000012473	RAB34	69	40.000
ENSGAGG00000000742	-	95	38.542	ENSGAGG00000005319	RAB5A	79	41.176
ENSGAGG00000000742	-	81	41.071	ENSGAGG00000012314	RAB9B	83	41.071
ENSGAGG00000000742	-	82	47.273	ENSGAGG00000012557	-	76	47.273
ENSGAGG00000000742	-	99	55.446	ENSGAGG00000006802	RAB1A	82	60.355
ENSGAGG00000000742	-	82	47.879	ENSGAGG00000014814	RAB11A	76	47.879
ENSGAGG00000000742	-	78	44.654	ENSGAGG00000004918	-	78	44.654
ENSGAGG00000000742	-	97	54.000	ENSGAGG00000023956	RAB1B	84	59.763
ENSGAGG00000000742	-	96	37.000	ENSGAGG00000012234	RAB7A	83	39.884
ENSGAGG00000000742	-	82	31.461	ENSGAGG00000024347	-	69	31.461
ENSGAGG00000000742	-	95	43.902	ENSGAGG00000009488	RAB33A	77	47.429
ENSGAGG00000000742	-	74	34.211	ENSGAGG00000025053	RRAS2	79	34.756
ENSGAGG00000000742	-	85	38.372	ENSGAGG00000011057	KRAS	91	38.372
ENSGAGG00000000742	-	93	42.553	ENSGAGG00000004988	RAB14	82	43.243
ENSGAGG00000000742	-	60	35.484	ENSGAGG00000020394	RAB7B	78	35.484
ENSGAGG00000000742	-	81	44.785	ENSGAGG00000015642	-	79	44.785
ENSGAGG00000000742	-	99	31.250	ENSGAGG00000022039	-	82	33.714
ENSGAGG00000000742	-	80	38.509	ENSGAGG00000018569	RAB22A	83	38.509
ENSGAGG00000000742	-	95	38.974	ENSGAGG00000022371	-	76	43.038
ENSGAGG00000000742	-	85	52.907	ENSGAGG00000007278	RAB12	70	52.907
ENSGAGG00000000742	-	58	30.252	ENSGAGG00000024318	ARL4D	60	30.000
ENSGAGG00000000742	-	84	45.665	ENSGAGG00000004921	RAB42	80	45.665
ENSGAGG00000000742	-	88	38.983	ENSGAGG00000017673	NRAS	93	38.983
ENSGAGG00000000742	-	82	46.061	ENSGAGG00000020702	-	76	46.061
ENSGAGG00000000742	-	97	40.816	ENSGAGG00000020703	RAB25	85	42.308
ENSGAGG00000000742	-	80	37.576	ENSGAGG00000020094	MRAS	84	38.068
ENSGAGG00000000742	-	97	38.500	ENSGAGG00000002936	RAB33B	79	42.308
ENSGAGG00000000742	-	82	51.220	ENSGAGG00000004474	RAB30	81	51.220
ENSGAGG00000000742	-	96	35.751	ENSGAGG00000019886	-	89	37.647
ENSGAGG00000000742	-	80	38.272	ENSGAGG00000012709	RAB23	72	38.150

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000000742	-	99	81.281	ENSG00000143545	RAB13	85	90.751	Homo_sapiens
ENSGAGG00000000742	-	88	83.523	ENSACIG00000008584	rab13	85	83.523	Amphilophus_citrinellus
ENSGAGG00000000742	-	99	82.266	ENSANAG00000030247	-	99	82.266	Aotus_nancymaae
ENSGAGG00000000742	-	100	78.922	ENSAMXG00000030712	rab13	90	84.153	Astyanax_mexicanus
ENSGAGG00000000742	-	100	80.976	ENSBTAG00000017604	RAB13	85	90.751	Bos_taurus
ENSGAGG00000000742	-	81	49.693	WBGene00019317	K02E10.1	75	49.693	Caenorhabditis_elegans
ENSGAGG00000000742	-	86	90.751	ENSCJAG00000009933	-	85	90.751	Callithrix_jacchus
ENSGAGG00000000742	-	100	80.583	ENSCHIG00000022271	-	85	90.751	Capra_hircus
ENSGAGG00000000742	-	99	82.178	ENSCPOG00000011491	-	91	86.486	Cavia_porcellus
ENSGAGG00000000742	-	99	81.281	ENSCCAG00000028502	-	85	90.751	Cebus_capucinus
ENSGAGG00000000742	-	99	81.281	ENSCATG00000041779	-	85	90.751	Cercocebus_atys
ENSGAGG00000000742	-	99	82.178	ENSCLAG00000006603	-	88	89.385	Chinchilla_lanigera
ENSGAGG00000000742	-	99	81.281	ENSCANG00000036573	-	85	90.751	Colobus_angolensis_palliatus
ENSGAGG00000000742	-	99	82.178	ENSCGRG00001021505	Rab13	85	90.751	Cricetulus_griseus_chok1gshd
ENSGAGG00000000742	-	99	82.178	ENSCGRG00000012126	Rab13	85	90.751	Cricetulus_griseus_crigri
ENSGAGG00000000742	-	100	77.228	ENSCSEG00000002358	rab13	91	81.967	Cynoglossus_semilaevis
ENSGAGG00000000742	-	100	80.693	ENSDARG00000034771	rab13	91	84.153	Danio_rerio
ENSGAGG00000000742	-	99	83.663	ENSDORG00000001591	Rab13	99	83.663	Dipodomys_ordii
ENSGAGG00000000742	-	99	81.683	ENSEASG00005000683	-	85	90.751	Equus_asinus_asinus
ENSGAGG00000000742	-	99	81.683	ENSECAG00000016551	RAB13	85	90.751	Equus_caballus
ENSGAGG00000000742	-	100	79.803	ENSEEUG00000001233	-	100	79.803	Erinaceus_europaeus
ENSGAGG00000000742	-	100	76.119	ENSELUG00000012801	rab13	91	80.874	Esox_lucius
ENSGAGG00000000742	-	99	80.296	ENSFCAG00000045269	-	85	88.439	Felis_catus
ENSGAGG00000000742	-	66	93.182	ENSFDAG00000014469	-	100	93.182	Fukomys_damarensis
ENSGAGG00000000742	-	100	78.109	ENSFHEG00000021221	rab13	96	84.659	Fundulus_heteroclitus
ENSGAGG00000000742	-	100	78.713	ENSGACG00000011925	rab13	90	83.060	Gasterosteus_aculeatus
ENSGAGG00000000742	-	99	81.281	ENSGGOG00000023693	RAB13	85	90.751	Gorilla_gorilla
ENSGAGG00000000742	-	99	81.095	ENSHGLG00000008749	RAB13	89	89.385	Heterocephalus_glaber_female
ENSGAGG00000000742	-	99	81.095	ENSHGLG00100013608	RAB13	89	89.385	Heterocephalus_glaber_male
ENSGAGG00000000742	-	100	74.752	ENSHCOG00000007440	rab13	97	84.659	Hippocampus_comes
ENSGAGG00000000742	-	100	77.114	ENSIPUG00000003199	rab13	89	84.270	Ictalurus_punctatus
ENSGAGG00000000742	-	99	83.663	ENSSTOG00000011222	-	93	86.772	Ictidomys_tridecemlineatus
ENSGAGG00000000742	-	99	82.178	ENSJJAG00000010575	Rab13	99	82.178	Jaculus_jaculus
ENSGAGG00000000742	-	100	79.104	ENSKMAG00000001908	rab13	97	80.220	Kryptolebias_marmoratus
ENSGAGG00000000742	-	100	76.733	ENSLBEG00000026779	rab13	91	81.421	Labrus_bergylta
ENSGAGG00000000742	-	88	79.545	ENSLACG00000008103	-	99	79.545	Latimeria_chalumnae
ENSGAGG00000000742	-	99	81.281	ENSMFAG00000041018	RAB13	85	90.751	Macaca_fascicularis
ENSGAGG00000000742	-	99	81.281	ENSMNEG00000028951	-	85	90.751	Macaca_nemestrina
ENSGAGG00000000742	-	99	81.281	ENSMLEG00000042247	-	85	90.751	Mandrillus_leucophaeus
ENSGAGG00000000742	-	100	78.713	ENSMAMG00000014602	rab13	91	83.060	Mastacembelus_armatus
ENSGAGG00000000742	-	99	82.673	ENSMAUG00000015713	Rab13	85	91.329	Mesocricetus_auratus
ENSGAGG00000000742	-	99	80.788	ENSMICG00000010340	-	94	85.714	Microcebus_murinus
ENSGAGG00000000742	-	99	83.168	ENSMOCG00000021448	Rab13	85	91.908	Microtus_ochrogaster
ENSGAGG00000000742	-	99	83.663	ENSMODG00000017295	-	74	89.888	Monodelphis_domestica
ENSGAGG00000000742	-	99	83.000	MGP_CAROLIEiJ_G0025227	Rab13	85	90.751	Mus_caroli
ENSGAGG00000000742	-	86	90.751	ENSMUSG00000027935	Rab13	86	90.751	Mus_musculus
ENSGAGG00000000742	-	100	82.266	MGP_PahariEiJ_G0026671	Rab13	86	90.751	Mus_pahari
ENSGAGG00000000742	-	99	83.333	ENSNGAG00000010309	Rab13	86	91.908	Nannospalax_galili
ENSGAGG00000000742	-	100	78.109	ENSNBRG00000004124	rab13	89	83.708	Neolamprologus_brichardi
ENSGAGG00000000742	-	99	81.281	ENSNLEG00000028944	-	88	90.751	Nomascus_leucogenys
ENSGAGG00000000742	-	99	84.236	ENSMEUG00000009667	-	99	84.236	Notamacropus_eugenii
ENSGAGG00000000742	-	99	80.392	ENSODEG00000010443	-	93	84.127	Octodon_degus
ENSGAGG00000000742	-	63	94.444	ENSODEG00000012634	-	99	94.444	Octodon_degus
ENSGAGG00000000742	-	100	76.238	ENSONIG00000006340	rab13	87	84.091	Oreochromis_niloticus
ENSGAGG00000000742	-	86	90.751	ENSOCUG00000006286	-	97	90.751	Oryctolagus_cuniculus
ENSGAGG00000000742	-	100	78.218	ENSOMEG00000008210	rab13	91	83.607	Oryzias_melastigma
ENSGAGG00000000742	-	99	79.902	ENSOGAG00000016969	-	86	90.173	Otolemur_garnettii
ENSGAGG00000000742	-	99	81.281	ENSPPAG00000028435	-	85	90.751	Pan_paniscus
ENSGAGG00000000742	-	99	80.296	ENSPPRG00000008865	-	85	88.439	Panthera_pardus
ENSGAGG00000000742	-	99	81.281	ENSPTRG00000001370	RAB13	85	90.751	Pan_troglodytes
ENSGAGG00000000742	-	99	81.281	ENSPANG00000004479	-	85	90.751	Papio_anubis
ENSGAGG00000000742	-	100	76.733	ENSPMGG00000007680	rab13	91	80.874	Periophthalmus_magnuspinnatus
ENSGAGG00000000742	-	54	96.296	ENSPEMG00000017353	-	81	96.296	Peromyscus_maniculatus_bairdii
ENSGAGG00000000742	-	99	84.236	ENSPCIG00000029350	-	99	84.236	Phascolarctos_cinereus
ENSGAGG00000000742	-	88	84.091	ENSPLAG00000005832	RAB13	94	84.091	Poecilia_latipinna
ENSGAGG00000000742	-	91	82.418	ENSPREG00000017567	rab13	100	79.104	Poecilia_reticulata
ENSGAGG00000000742	-	99	81.281	ENSPPYG00000000790	-	85	90.751	Pongo_abelii
ENSGAGG00000000742	-	99	81.773	ENSPCOG00000012189	-	91	86.957	Propithecus_coquereli
ENSGAGG00000000742	-	99	80.882	ENSPVAG00000011095	-	94	84.656	Pteropus_vampyrus
ENSGAGG00000000742	-	88	85.227	ENSPNAG00000004189	rab13	93	85.227	Pygocentrus_nattereri
ENSGAGG00000000742	-	99	83.168	ENSRNOG00000016733	Rab13	85	91.329	Rattus_norvegicus
ENSGAGG00000000742	-	99	81.281	ENSRBIG00000008552	-	85	90.751	Rhinopithecus_bieti
ENSGAGG00000000742	-	99	81.281	ENSRROG00000036885	-	85	90.751	Rhinopithecus_roxellana
ENSGAGG00000000742	-	99	81.281	ENSSBOG00000020342	-	86	90.751	Saimiri_boliviensis_boliviensis
ENSGAGG00000000742	-	99	85.149	ENSSHAG00000011866	-	99	85.149	Sarcophilus_harrisii
ENSGAGG00000000742	-	99	82.178	ENSSSCG00000006564	-	99	82.178	Sus_scrofa
ENSGAGG00000000742	-	100	78.218	ENSTRUG00000024177	rab13	91	82.514	Takifugu_rubripes
ENSGAGG00000000742	-	99	82.843	ENSTBEG00000012734	-	85	91.908	Tupaia_belangeri
ENSGAGG00000000742	-	99	81.683	ENSTTRG00000011183	-	85	90.751	Tursiops_truncatus
ENSGAGG00000000742	-	73	81.507	ENSXETG00000020729	rab13	100	79.375	Xenopus_tropicalis
ENSGAGG00000000742	-	88	82.955	ENSXCOG00000019533	rab13	94	82.955	Xiphophorus_couchianus