EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000000762 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 25199 bases
Position: chrPPEB01006286.1:69470-94668
Accession: 10765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000000926	PRP21_like_P	PF12230.8	9.7e-52	1	1
ENSGAGP00000000926	Surp	PF01805.20	7.4e-46	1	2
ENSGAGP00000000926	Surp	PF01805.20	7.4e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000001049	SF3A1-201	2684	-	ENSGAGP00000000926	758 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000000762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000000762's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000000762	SF3A1	99	91.459	ENSG00000099995	SF3A1	96	90.933	Homo_sapiens
ENSGAGG00000000762	SF3A1	99	81.711	ENSAPOG00000020465	sf3a1	96	81.711	Acanthochromis_polyacanthus
ENSGAGG00000000762	SF3A1	97	92.255	ENSAMEG00000007737	SF3A1	96	90.957	Ailuropoda_melanoleuca
ENSGAGG00000000762	SF3A1	99	82.105	ENSACIG00000020672	sf3a1	96	81.711	Amphilophus_citrinellus
ENSGAGG00000000762	SF3A1	99	81.711	ENSAOCG00000003060	sf3a1	96	81.711	Amphiprion_ocellaris
ENSGAGG00000000762	SF3A1	99	81.842	ENSAPEG00000010735	sf3a1	96	81.842	Amphiprion_percula
ENSGAGG00000000762	SF3A1	100	81.782	ENSATEG00000021201	sf3a1	95	81.902	Anabas_testudineus
ENSGAGG00000000762	SF3A1	95	94.598	ENSAPLG00000009057	SF3A1	95	94.437	Anas_platyrhynchos
ENSGAGG00000000762	SF3A1	99	86.968	ENSACAG00000009415	SF3A1	96	87.742	Anolis_carolinensis
ENSGAGG00000000762	SF3A1	99	91.327	ENSANAG00000032045	SF3A1	96	91.196	Aotus_nancymaae
ENSGAGG00000000762	SF3A1	99	82.586	ENSACLG00000012622	sf3a1	96	82.850	Astatotilapia_calliptera
ENSGAGG00000000762	SF3A1	99	81.565	ENSAMXG00000005382	sf3a1	96	82.095	Astyanax_mexicanus
ENSGAGG00000000762	SF3A1	99	91.459	ENSBTAG00000003390	SF3A1	96	91.327	Bos_taurus
ENSGAGG00000000762	SF3A1	79	45.841	WBGene00004188	prp-21	82	44.639	Caenorhabditis_elegans
ENSGAGG00000000762	SF3A1	99	91.327	ENSCJAG00000010370	SF3A1	96	91.196	Callithrix_jacchus
ENSGAGG00000000762	SF3A1	99	91.327	ENSCAFG00000012559	SF3A1	96	91.196	Canis_familiaris
ENSGAGG00000000762	SF3A1	99	91.327	ENSCAFG00020000838	SF3A1	96	91.196	Canis_lupus_dingo
ENSGAGG00000000762	SF3A1	99	91.350	ENSCHIG00000018642	SF3A1	96	91.196	Capra_hircus
ENSGAGG00000000762	SF3A1	99	91.327	ENSTSYG00000004739	SF3A1	96	91.196	Carlito_syrichta
ENSGAGG00000000762	SF3A1	97	78.155	ENSCAPG00000015414	SF3A1	96	78.125	Cavia_aperea
ENSGAGG00000000762	SF3A1	99	91.853	ENSCPOG00000014589	SF3A1	96	91.327	Cavia_porcellus
ENSGAGG00000000762	SF3A1	99	91.327	ENSCCAG00000032006	SF3A1	96	91.196	Cebus_capucinus
ENSGAGG00000000762	SF3A1	99	91.196	ENSCATG00000029241	SF3A1	96	91.064	Cercocebus_atys
ENSGAGG00000000762	SF3A1	99	91.196	ENSCLAG00000006508	SF3A1	96	91.064	Chinchilla_lanigera
ENSGAGG00000000762	SF3A1	99	91.064	ENSCSAG00000009470	SF3A1	96	90.933	Chlorocebus_sabaeus
ENSGAGG00000000762	SF3A1	60	96.190	ENSCHOG00000005201	SF3A1	64	96.190	Choloepus_hoffmanni
ENSGAGG00000000762	SF3A1	99	99.470	ENSCPBG00000007595	SF3A1	96	99.470	Chrysemys_picta_bellii
ENSGAGG00000000762	SF3A1	94	51.519	ENSCING00000008526	-	68	57.011	Ciona_intestinalis
ENSGAGG00000000762	SF3A1	96	50.333	ENSCSAVG00000005608	-	86	60.759	Ciona_savignyi
ENSGAGG00000000762	SF3A1	99	91.064	ENSCANG00000033564	SF3A1	96	90.933	Colobus_angolensis_palliatus
ENSGAGG00000000762	SF3A1	99	91.064	ENSCGRG00001008933	Sf3a1	96	90.933	Cricetulus_griseus_chok1gshd
ENSGAGG00000000762	SF3A1	99	91.064	ENSCGRG00000006127	Sf3a1	96	90.933	Cricetulus_griseus_crigri
ENSGAGG00000000762	SF3A1	99	81.159	ENSCSEG00000010792	sf3a1	96	80.526	Cynoglossus_semilaevis
ENSGAGG00000000762	SF3A1	99	81.711	ENSCVAG00000004560	sf3a1	96	79.974	Cyprinodon_variegatus
ENSGAGG00000000762	SF3A1	99	82.740	ENSDARG00000041887	sf3a1	100	82.873	Danio_rerio
ENSGAGG00000000762	SF3A1	97	91.801	ENSDNOG00000010629	SF3A1	96	89.646	Dasypus_novemcinctus
ENSGAGG00000000762	SF3A1	99	91.721	ENSDORG00000005613	Sf3a1	96	91.196	Dipodomys_ordii
ENSGAGG00000000762	SF3A1	84	60.949	FBgn0266917	Sf3a1	79	60.909	Drosophila_melanogaster
ENSGAGG00000000762	SF3A1	88	92.066	ENSETEG00000017194	SF3A1	100	90.313	Echinops_telfairi
ENSGAGG00000000762	SF3A1	99	64.728	ENSEBUG00000001285	sf3a1	96	64.757	Eptatretus_burgeri
ENSGAGG00000000762	SF3A1	99	91.590	ENSEASG00005010254	SF3A1	96	91.459	Equus_asinus_asinus
ENSGAGG00000000762	SF3A1	99	91.590	ENSECAG00000023962	SF3A1	96	91.459	Equus_caballus
ENSGAGG00000000762	SF3A1	76	93.103	ENSEEUG00000003159	SF3A1	78	93.103	Erinaceus_europaeus
ENSGAGG00000000762	SF3A1	100	80.679	ENSELUG00000022578	sf3a1	99	79.634	Esox_lucius
ENSGAGG00000000762	SF3A1	99	91.459	ENSFCAG00000011932	SF3A1	96	91.327	Felis_catus
ENSGAGG00000000762	SF3A1	95	93.194	ENSFALG00000006944	SF3A1	94	95.687	Ficedula_albicollis
ENSGAGG00000000762	SF3A1	99	91.064	ENSFDAG00000009560	SF3A1	96	90.933	Fukomys_damarensis
ENSGAGG00000000762	SF3A1	99	82.632	ENSFHEG00000010866	sf3a1	96	81.842	Fundulus_heteroclitus
ENSGAGG00000000762	SF3A1	99	80.291	ENSGMOG00000016024	sf3a1	96	79.365	Gadus_morhua
ENSGAGG00000000762	SF3A1	99	95.641	ENSGALG00000007937	SF3A1	96	95.641	Gallus_gallus
ENSGAGG00000000762	SF3A1	99	81.447	ENSGAFG00000009111	sf3a1	96	80.369	Gambusia_affinis
ENSGAGG00000000762	SF3A1	99	80.581	ENSGACG00000011893	sf3a1	96	80.053	Gasterosteus_aculeatus
ENSGAGG00000000762	SF3A1	99	91.459	ENSGGOG00000012631	SF3A1	96	90.933	Gorilla_gorilla
ENSGAGG00000000762	SF3A1	99	82.586	ENSHBUG00000015795	sf3a1	96	82.850	Haplochromis_burtoni
ENSGAGG00000000762	SF3A1	99	91.327	ENSHGLG00000007907	SF3A1	96	91.196	Heterocephalus_glaber_female
ENSGAGG00000000762	SF3A1	99	91.327	ENSHGLG00100013799	SF3A1	96	91.196	Heterocephalus_glaber_male
ENSGAGG00000000762	SF3A1	99	79.842	ENSHCOG00000015423	sf3a1	96	78.084	Hippocampus_comes
ENSGAGG00000000762	SF3A1	97	80.623	ENSIPUG00000002470	sf3a1	94	80.894	Ictalurus_punctatus
ENSGAGG00000000762	SF3A1	99	91.459	ENSSTOG00000013892	SF3A1	96	91.327	Ictidomys_tridecemlineatus
ENSGAGG00000000762	SF3A1	99	91.470	ENSJJAG00000022566	Sf3a1	96	91.339	Jaculus_jaculus
ENSGAGG00000000762	SF3A1	99	81.184	ENSKMAG00000002400	sf3a1	96	80.658	Kryptolebias_marmoratus
ENSGAGG00000000762	SF3A1	99	81.818	ENSLBEG00000022974	sf3a1	96	81.423	Labrus_bergylta
ENSGAGG00000000762	SF3A1	99	85.132	ENSLACG00000003565	SF3A1	96	83.947	Latimeria_chalumnae
ENSGAGG00000000762	SF3A1	99	83.990	ENSLOCG00000008251	sf3a1	95	84.383	Lepisosteus_oculatus
ENSGAGG00000000762	SF3A1	99	91.196	ENSLAFG00000000448	SF3A1	96	91.196	Loxodonta_africana
ENSGAGG00000000762	SF3A1	99	58.146	ENSLAFG00000026032	-	95	57.748	Loxodonta_africana
ENSGAGG00000000762	SF3A1	99	90.933	ENSMFAG00000031979	SF3A1	96	90.802	Macaca_fascicularis
ENSGAGG00000000762	SF3A1	99	90.933	ENSMMUG00000005547	SF3A1	96	90.802	Macaca_mulatta
ENSGAGG00000000762	SF3A1	99	91.064	ENSMNEG00000037229	SF3A1	96	90.933	Macaca_nemestrina
ENSGAGG00000000762	SF3A1	99	91.064	ENSMLEG00000041908	SF3A1	96	90.933	Mandrillus_leucophaeus
ENSGAGG00000000762	SF3A1	97	83.649	ENSMAMG00000006460	sf3a1	98	78.392	Mastacembelus_armatus
ENSGAGG00000000762	SF3A1	99	82.586	ENSMZEG00005009633	sf3a1	96	82.850	Maylandia_zebra
ENSGAGG00000000762	SF3A1	95	94.591	ENSMGAG00000001330	SF3A1	96	94.429	Meleagris_gallopavo
ENSGAGG00000000762	SF3A1	92	88.429	ENSMAUG00000020317	Sf3a1	96	84.058	Mesocricetus_auratus
ENSGAGG00000000762	SF3A1	99	91.064	ENSMICG00000010038	SF3A1	96	90.933	Microcebus_murinus
ENSGAGG00000000762	SF3A1	99	91.196	ENSMOCG00000008438	Sf3a1	96	91.064	Microtus_ochrogaster
ENSGAGG00000000762	SF3A1	99	80.132	ENSMMOG00000015588	sf3a1	95	78.947	Mola_mola
ENSGAGG00000000762	SF3A1	99	92.095	ENSMODG00000009270	SF3A1	96	92.358	Monodelphis_domestica
ENSGAGG00000000762	SF3A1	99	81.332	ENSMALG00000000148	sf3a1	96	81.462	Monopterus_albus
ENSGAGG00000000762	SF3A1	99	90.670	MGP_CAROLIEiJ_G0016029	Sf3a1	96	90.539	Mus_caroli
ENSGAGG00000000762	SF3A1	99	90.670	ENSMUSG00000002129	Sf3a1	96	90.539	Mus_musculus
ENSGAGG00000000762	SF3A1	99	90.539	MGP_PahariEiJ_G0016862	Sf3a1	96	90.407	Mus_pahari
ENSGAGG00000000762	SF3A1	99	90.670	MGP_SPRETEiJ_G0016870	Sf3a1	96	90.539	Mus_spretus
ENSGAGG00000000762	SF3A1	99	91.064	ENSMPUG00000013144	SF3A1	96	90.933	Mustela_putorius_furo
ENSGAGG00000000762	SF3A1	99	91.327	ENSMLUG00000002139	SF3A1	96	91.196	Myotis_lucifugus
ENSGAGG00000000762	SF3A1	99	91.721	ENSNGAG00000016977	Sf3a1	96	91.196	Nannospalax_galili
ENSGAGG00000000762	SF3A1	99	82.222	ENSNBRG00000016642	sf3a1	96	82.484	Neolamprologus_brichardi
ENSGAGG00000000762	SF3A1	99	91.064	ENSNLEG00000003686	SF3A1	96	90.933	Nomascus_leucogenys
ENSGAGG00000000762	SF3A1	99	83.136	ENSMEUG00000008741	SF3A1	100	84.190	Notamacropus_eugenii
ENSGAGG00000000762	SF3A1	96	93.169	ENSOPRG00000016636	SF3A1	96	91.590	Ochotona_princeps
ENSGAGG00000000762	SF3A1	99	91.316	ENSODEG00000002571	SF3A1	96	91.184	Octodon_degus
ENSGAGG00000000762	SF3A1	99	80.764	ENSONIG00000010848	sf3a1	96	81.950	Oreochromis_niloticus
ENSGAGG00000000762	SF3A1	99	91.196	ENSOCUG00000007633	SF3A1	96	91.064	Oryctolagus_cuniculus
ENSGAGG00000000762	SF3A1	99	81.974	ENSORLG00000013050	sf3a1	99	82.895	Oryzias_latipes
ENSGAGG00000000762	SF3A1	99	82.763	ENSORLG00020003236	sf3a1	95	83.026	Oryzias_latipes_hni
ENSGAGG00000000762	SF3A1	99	81.926	ENSORLG00015017411	sf3a1	96	83.113	Oryzias_latipes_hsok
ENSGAGG00000000762	SF3A1	99	82.322	ENSOMEG00000013362	sf3a1	96	82.190	Oryzias_melastigma
ENSGAGG00000000762	SF3A1	99	91.064	ENSOGAG00000012931	SF3A1	96	90.933	Otolemur_garnettii
ENSGAGG00000000762	SF3A1	99	91.447	ENSOARG00000006849	SF3A1	96	90.789	Ovis_aries
ENSGAGG00000000762	SF3A1	99	90.276	ENSPPAG00000041790	SF3A1	96	89.225	Pan_paniscus
ENSGAGG00000000762	SF3A1	99	91.459	ENSPPRG00000004391	SF3A1	96	91.327	Panthera_pardus
ENSGAGG00000000762	SF3A1	97	92.391	ENSPTIG00000000844	SF3A1	95	93.033	Panthera_tigris_altaica
ENSGAGG00000000762	SF3A1	99	91.459	ENSPTRG00000014240	SF3A1	96	90.933	Pan_troglodytes
ENSGAGG00000000762	SF3A1	99	91.064	ENSPANG00000020772	SF3A1	96	90.933	Papio_anubis
ENSGAGG00000000762	SF3A1	82	98.276	ENSPSIG00000012803	SF3A1	91	98.299	Pelodiscus_sinensis
ENSGAGG00000000762	SF3A1	96	83.699	ENSPMGG00000023096	sf3a1	96	82.853	Periophthalmus_magnuspinnatus
ENSGAGG00000000762	SF3A1	99	91.196	ENSPEMG00000009494	Sf3a1	96	91.064	Peromyscus_maniculatus_bairdii
ENSGAGG00000000762	SF3A1	72	77.148	ENSPMAG00000007139	-	93	78.506	Petromyzon_marinus
ENSGAGG00000000762	SF3A1	99	91.700	ENSPCIG00000022692	SF3A1	96	91.963	Phascolarctos_cinereus
ENSGAGG00000000762	SF3A1	99	72.572	ENSPFOG00000016768	sf3a1	89	76.353	Poecilia_formosa
ENSGAGG00000000762	SF3A1	99	81.974	ENSPLAG00000017268	sf3a1	96	81.184	Poecilia_latipinna
ENSGAGG00000000762	SF3A1	83	83.228	ENSPMEG00000019811	sf3a1	93	82.092	Poecilia_mexicana
ENSGAGG00000000762	SF3A1	99	82.368	ENSPREG00000010347	sf3a1	96	81.711	Poecilia_reticulata
ENSGAGG00000000762	SF3A1	99	91.064	ENSPPYG00000011707	SF3A1	96	90.933	Pongo_abelii
ENSGAGG00000000762	SF3A1	55	97.510	ENSPCAG00000003266	SF3A1	53	97.510	Procavia_capensis
ENSGAGG00000000762	SF3A1	99	91.196	ENSPCOG00000026630	SF3A1	96	91.064	Propithecus_coquereli
ENSGAGG00000000762	SF3A1	99	87.648	ENSPVAG00000017719	SF3A1	96	87.911	Pteropus_vampyrus
ENSGAGG00000000762	SF3A1	99	82.586	ENSPNYG00000018706	sf3a1	96	82.850	Pundamilia_nyererei
ENSGAGG00000000762	SF3A1	98	81.758	ENSPNAG00000003721	sf3a1	95	81.891	Pygocentrus_nattereri
ENSGAGG00000000762	SF3A1	97	91.644	ENSRNOG00000005218	Sf3a1	96	90.670	Rattus_norvegicus
ENSGAGG00000000762	SF3A1	99	91.064	ENSRBIG00000032167	SF3A1	96	90.933	Rhinopithecus_bieti
ENSGAGG00000000762	SF3A1	99	91.064	ENSRROG00000044908	SF3A1	97	90.612	Rhinopithecus_roxellana
ENSGAGG00000000762	SF3A1	92	92.725	ENSSBOG00000021960	SF3A1	93	93.344	Saimiri_boliviensis_boliviensis
ENSGAGG00000000762	SF3A1	97	90.068	ENSSHAG00000003666	SF3A1	93	90.340	Sarcophilus_harrisii
ENSGAGG00000000762	SF3A1	99	82.176	ENSSFOG00015004579	sf3a1	96	82.569	Scleropages_formosus
ENSGAGG00000000762	SF3A1	99	81.135	ENSSMAG00000004275	sf3a1	96	80.607	Scophthalmus_maximus
ENSGAGG00000000762	SF3A1	99	82.609	ENSSDUG00000022219	sf3a1	96	81.555	Seriola_dumerili
ENSGAGG00000000762	SF3A1	99	82.609	ENSSLDG00000012642	sf3a1	96	81.555	Seriola_lalandi_dorsalis
ENSGAGG00000000762	SF3A1	96	89.891	ENSSARG00000005960	SF3A1	95	89.754	Sorex_araneus
ENSGAGG00000000762	SF3A1	99	92.037	ENSSPUG00000018863	SF3A1	96	91.514	Sphenodon_punctatus
ENSGAGG00000000762	SF3A1	99	83.136	ENSSPAG00000011856	sf3a1	96	82.609	Stegastes_partitus
ENSGAGG00000000762	SF3A1	99	91.196	ENSSSCG00000010002	SF3A1	97	90.754	Sus_scrofa
ENSGAGG00000000762	SF3A1	95	94.053	ENSTGUG00000010547	SF3A1	96	93.894	Taeniopygia_guttata
ENSGAGG00000000762	SF3A1	99	81.028	ENSTRUG00000006118	sf3a1	96	79.842	Takifugu_rubripes
ENSGAGG00000000762	SF3A1	62	80.970	ENSTNIG00000005713	sf3a1	72	85.333	Tetraodon_nigroviridis
ENSGAGG00000000762	SF3A1	99	84.100	ENSTBEG00000012771	SF3A1	96	83.968	Tupaia_belangeri
ENSGAGG00000000762	SF3A1	99	90.814	ENSTTRG00000001535	SF3A1	96	90.682	Tursiops_truncatus
ENSGAGG00000000762	SF3A1	99	91.196	ENSUAMG00000006750	SF3A1	96	91.064	Ursus_americanus
ENSGAGG00000000762	SF3A1	97	92.255	ENSUMAG00000016665	SF3A1	93	92.896	Ursus_maritimus
ENSGAGG00000000762	SF3A1	99	91.327	ENSVVUG00000003075	SF3A1	96	91.196	Vulpes_vulpes
ENSGAGG00000000762	SF3A1	99	83.990	ENSXETG00000016144	sf3a1	96	88.755	Xenopus_tropicalis
ENSGAGG00000000762	SF3A1	99	81.711	ENSXCOG00000015653	sf3a1	96	80.237	Xiphophorus_couchianus
ENSGAGG00000000762	SF3A1	100	81.389	ENSXMAG00000002753	sf3a1	98	80.315	Xiphophorus_maculatus