EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000000865 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 12770 bases
Position: chrPPEB01011518.1:15857-28626
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000001074	zf-U11-48K	PF05253.12	9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000001208	SNRNP48-201	1171	-	ENSGAGP00000001074	308 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000000865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000000865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000000865	SNRNP48	96	63.300	ENSG00000168566	SNRNP48	84	62.583	Homo_sapiens
ENSGAGG00000000865	SNRNP48	78	51.029	ENSAPOG00000021430	snrnp48	82	47.020	Acanthochromis_polyacanthus
ENSGAGG00000000865	SNRNP48	97	63.907	ENSAMEG00000017349	SNRNP48	85	63.907	Ailuropoda_melanoleuca
ENSGAGG00000000865	SNRNP48	78	48.374	ENSACIG00000002032	snrnp48	80	45.425	Amphilophus_citrinellus
ENSGAGG00000000865	SNRNP48	78	50.622	ENSAOCG00000010562	snrnp48	82	46.732	Amphiprion_ocellaris
ENSGAGG00000000865	SNRNP48	68	52.857	ENSAPEG00000003231	snrnp48	82	46.104	Amphiprion_percula
ENSGAGG00000000865	SNRNP48	67	54.589	ENSATEG00000020210	snrnp48	80	48.410	Anabas_testudineus
ENSGAGG00000000865	SNRNP48	98	74.013	ENSACAG00000002811	SNRNP48	92	74.013	Anolis_carolinensis
ENSGAGG00000000865	SNRNP48	96	62.626	ENSANAG00000033538	SNRNP48	84	61.921	Aotus_nancymaae
ENSGAGG00000000865	SNRNP48	92	49.825	ENSAMXG00000015309	snrnp48	88	47.557	Astyanax_mexicanus
ENSGAGG00000000865	SNRNP48	96	63.729	ENSBTAG00000001123	SNRNP48	84	63.333	Bos_taurus
ENSGAGG00000000865	SNRNP48	96	63.636	ENSCJAG00000021330	SNRNP48	84	62.914	Callithrix_jacchus
ENSGAGG00000000865	SNRNP48	97	64.667	ENSCAFG00000009574	SNRNP48	70	64.667	Canis_familiaris
ENSGAGG00000000865	SNRNP48	97	65.000	ENSCAFG00020013203	SNRNP48	84	65.000	Canis_lupus_dingo
ENSGAGG00000000865	SNRNP48	96	63.390	ENSCHIG00000015216	SNRNP48	84	63.000	Capra_hircus
ENSGAGG00000000865	SNRNP48	96	61.824	ENSTSYG00000000698	SNRNP48	84	61.667	Carlito_syrichta
ENSGAGG00000000865	SNRNP48	97	63.087	ENSCAPG00000006768	SNRNP48	92	63.087	Cavia_aperea
ENSGAGG00000000865	SNRNP48	96	63.051	ENSCPOG00000007910	SNRNP48	83	62.752	Cavia_porcellus
ENSGAGG00000000865	SNRNP48	96	62.626	ENSCCAG00000035652	SNRNP48	84	61.921	Cebus_capucinus
ENSGAGG00000000865	SNRNP48	96	62.290	ENSCATG00000033947	SNRNP48	84	61.589	Cercocebus_atys
ENSGAGG00000000865	SNRNP48	96	63.729	ENSCLAG00000003765	SNRNP48	83	63.423	Chinchilla_lanigera
ENSGAGG00000000865	SNRNP48	97	62.583	ENSCSAG00000007409	SNRNP48	84	62.583	Chlorocebus_sabaeus
ENSGAGG00000000865	SNRNP48	100	94.855	ENSCPBG00000019146	SNRNP48	95	94.855	Chrysemys_picta_bellii
ENSGAGG00000000865	SNRNP48	96	62.963	ENSCANG00000030017	SNRNP48	84	62.252	Colobus_angolensis_palliatus
ENSGAGG00000000865	SNRNP48	97	52.174	ENSCGRG00001008805	-	83	52.174	Cricetulus_griseus_chok1gshd
ENSGAGG00000000865	SNRNP48	97	63.667	ENSCGRG00001001076	-	84	63.667	Cricetulus_griseus_chok1gshd
ENSGAGG00000000865	SNRNP48	97	63.667	ENSCGRG00000007781	Snrnp48	84	63.667	Cricetulus_griseus_crigri
ENSGAGG00000000865	SNRNP48	71	48.636	ENSCSEG00000000722	snrnp48	76	43.972	Cynoglossus_semilaevis
ENSGAGG00000000865	SNRNP48	92	46.667	ENSCVAG00000019829	snrnp48	81	44.444	Cyprinodon_variegatus
ENSGAGG00000000865	SNRNP48	87	48.621	ENSDARG00000039989	snrnp48	83	48.161	Danio_rerio
ENSGAGG00000000865	SNRNP48	97	63.907	ENSDNOG00000014978	SNRNP48	84	63.907	Dasypus_novemcinctus
ENSGAGG00000000865	SNRNP48	96	61.149	ENSDORG00000015140	Snrnp48	83	61.149	Dipodomys_ordii
ENSGAGG00000000865	SNRNP48	97	63.333	ENSEASG00005012021	SNRNP48	84	63.333	Equus_asinus_asinus
ENSGAGG00000000865	SNRNP48	97	63.667	ENSECAG00000026937	SNRNP48	84	63.667	Equus_caballus
ENSGAGG00000000865	SNRNP48	97	46.179	ENSEEUG00000015437	SNRNP48	84	46.179	Erinaceus_europaeus
ENSGAGG00000000865	SNRNP48	87	51.111	ENSELUG00000009766	snrnp48	83	47.712	Esox_lucius
ENSGAGG00000000865	SNRNP48	96	65.436	ENSFCAG00000018853	SNRNP48	83	65.436	Felis_catus
ENSGAGG00000000865	SNRNP48	97	78.188	ENSFALG00000007797	SNRNP48	93	78.188	Ficedula_albicollis
ENSGAGG00000000865	SNRNP48	97	61.745	ENSFDAG00000009231	SNRNP48	83	61.745	Fukomys_damarensis
ENSGAGG00000000865	SNRNP48	66	54.950	ENSFHEG00000014647	snrnp48	96	47.279	Fundulus_heteroclitus
ENSGAGG00000000865	SNRNP48	68	52.381	ENSGMOG00000018599	-	87	46.403	Gadus_morhua
ENSGAGG00000000865	SNRNP48	93	75.433	ENSGALG00000013005	SNRNP48	96	75.433	Gallus_gallus
ENSGAGG00000000865	SNRNP48	66	54.902	ENSGAFG00000021639	snrnp48	81	47.973	Gambusia_affinis
ENSGAGG00000000865	SNRNP48	65	51.244	ENSGACG00000017756	-	84	44.224	Gasterosteus_aculeatus
ENSGAGG00000000865	SNRNP48	96	63.300	ENSGGOG00000013220	SNRNP48	84	62.583	Gorilla_gorilla
ENSGAGG00000000865	SNRNP48	68	51.442	ENSHBUG00000017066	snrnp48	81	43.506	Haplochromis_burtoni
ENSGAGG00000000865	SNRNP48	97	62.752	ENSHGLG00000015241	SNRNP48	83	62.752	Heterocephalus_glaber_female
ENSGAGG00000000865	SNRNP48	97	62.752	ENSHGLG00100010027	SNRNP48	83	62.752	Heterocephalus_glaber_male
ENSGAGG00000000865	SNRNP48	67	50.725	ENSHCOG00000014066	snrnp48	81	44.407	Hippocampus_comes
ENSGAGG00000000865	SNRNP48	97	63.576	ENSSTOG00000014635	SNRNP48	84	63.576	Ictidomys_tridecemlineatus
ENSGAGG00000000865	SNRNP48	97	62.000	ENSJJAG00000011495	Snrnp48	84	62.000	Jaculus_jaculus
ENSGAGG00000000865	SNRNP48	68	51.675	ENSKMAG00000016514	snrnp48	83	44.702	Kryptolebias_marmoratus
ENSGAGG00000000865	SNRNP48	68	50.952	ENSLBEG00000026249	snrnp48	83	44.000	Labrus_bergylta
ENSGAGG00000000865	SNRNP48	97	58.361	ENSLACG00000003958	SNRNP48	87	58.361	Latimeria_chalumnae
ENSGAGG00000000865	SNRNP48	82	58.594	ENSLOCG00000004187	snrnp48	83	55.482	Lepisosteus_oculatus
ENSGAGG00000000865	SNRNP48	96	63.729	ENSLAFG00000011152	SNRNP48	84	63.000	Loxodonta_africana
ENSGAGG00000000865	SNRNP48	96	63.300	ENSMFAG00000045216	SNRNP48	84	62.583	Macaca_fascicularis
ENSGAGG00000000865	SNRNP48	96	63.300	ENSMMUG00000014785	SNRNP48	84	62.583	Macaca_mulatta
ENSGAGG00000000865	SNRNP48	96	63.300	ENSMNEG00000042269	SNRNP48	84	62.583	Macaca_nemestrina
ENSGAGG00000000865	SNRNP48	96	63.300	ENSMLEG00000034004	SNRNP48	84	62.583	Mandrillus_leucophaeus
ENSGAGG00000000865	SNRNP48	66	53.922	ENSMAMG00000018673	snrnp48	71	47.619	Mastacembelus_armatus
ENSGAGG00000000865	SNRNP48	95	76.871	ENSMGAG00000006037	SNRNP48	99	76.871	Meleagris_gallopavo
ENSGAGG00000000865	SNRNP48	97	64.333	ENSMAUG00000011944	Snrnp48	84	64.333	Mesocricetus_auratus
ENSGAGG00000000865	SNRNP48	96	64.068	ENSMICG00000012497	SNRNP48	84	63.333	Microcebus_murinus
ENSGAGG00000000865	SNRNP48	97	63.333	ENSMOCG00000015555	Snrnp48	84	63.333	Microtus_ochrogaster
ENSGAGG00000000865	SNRNP48	63	52.850	ENSMMOG00000003072	-	61	52.850	Mola_mola
ENSGAGG00000000865	SNRNP48	97	72.517	ENSMODG00000009996	SNRNP48	80	72.517	Monodelphis_domestica
ENSGAGG00000000865	SNRNP48	68	55.238	ENSMALG00000005725	snrnp48	84	47.020	Monopterus_albus
ENSGAGG00000000865	SNRNP48	97	62.000	MGP_CAROLIEiJ_G0018441	Snrnp48	84	62.000	Mus_caroli
ENSGAGG00000000865	SNRNP48	97	63.000	ENSMUSG00000021431	Snrnp48	84	63.000	Mus_musculus
ENSGAGG00000000865	SNRNP48	97	63.667	MGP_PahariEiJ_G0019509	Snrnp48	84	63.667	Mus_pahari
ENSGAGG00000000865	SNRNP48	97	63.333	MGP_SPRETEiJ_G0019321	Snrnp48	84	63.333	Mus_spretus
ENSGAGG00000000865	SNRNP48	97	62.667	ENSNGAG00000004849	Snrnp48	84	62.667	Nannospalax_galili
ENSGAGG00000000865	SNRNP48	68	51.442	ENSNBRG00000012127	snrnp48	82	43.831	Neolamprologus_brichardi
ENSGAGG00000000865	SNRNP48	96	63.300	ENSNLEG00000011667	SNRNP48	84	62.583	Nomascus_leucogenys
ENSGAGG00000000865	SNRNP48	93	60.627	ENSOPRG00000015471	SNRNP48	85	60.976	Ochotona_princeps
ENSGAGG00000000865	SNRNP48	96	44.407	ENSONIG00000001520	snrnp48	82	44.156	Oreochromis_niloticus
ENSGAGG00000000865	SNRNP48	81	64.940	ENSOCUG00000005168	SNRNP48	83	64.794	Oryctolagus_cuniculus
ENSGAGG00000000865	SNRNP48	81	51.004	ENSORLG00000015654	snrnp48	82	47.508	Oryzias_latipes
ENSGAGG00000000865	SNRNP48	81	50.201	ENSORLG00020015976	snrnp48	70	46.179	Oryzias_latipes_hni
ENSGAGG00000000865	SNRNP48	81	51.406	ENSORLG00015022379	snrnp48	71	47.176	Oryzias_latipes_hsok
ENSGAGG00000000865	SNRNP48	81	51.200	ENSOMEG00000022007	snrnp48	82	46.104	Oryzias_melastigma
ENSGAGG00000000865	SNRNP48	92	62.324	ENSOGAG00000005275	SNRNP48	84	61.905	Otolemur_garnettii
ENSGAGG00000000865	SNRNP48	97	62.207	ENSOARG00000017319	SNRNP48	99	62.458	Ovis_aries
ENSGAGG00000000865	SNRNP48	96	63.300	ENSPPAG00000032873	SNRNP48	84	62.583	Pan_paniscus
ENSGAGG00000000865	SNRNP48	97	64.570	ENSPPRG00000004283	SNRNP48	83	65.436	Panthera_pardus
ENSGAGG00000000865	SNRNP48	96	65.436	ENSPTIG00000013502	SNRNP48	98	65.436	Panthera_tigris_altaica
ENSGAGG00000000865	SNRNP48	96	63.300	ENSPTRG00000017703	SNRNP48	84	62.583	Pan_troglodytes
ENSGAGG00000000865	SNRNP48	96	63.300	ENSPANG00000000771	SNRNP48	84	62.583	Papio_anubis
ENSGAGG00000000865	SNRNP48	95	47.020	ENSPKIG00000013703	snrnp48	63	47.020	Paramormyrops_kingsleyae
ENSGAGG00000000865	SNRNP48	97	87.333	ENSPSIG00000002213	SNRNP48	94	87.333	Pelodiscus_sinensis
ENSGAGG00000000865	SNRNP48	69	50.935	ENSPMGG00000008120	snrnp48	74	50.935	Periophthalmus_magnuspinnatus
ENSGAGG00000000865	SNRNP48	97	63.667	ENSPEMG00000008872	Snrnp48	84	63.667	Peromyscus_maniculatus_bairdii
ENSGAGG00000000865	SNRNP48	69	52.830	ENSPFOG00000003578	snrnp48	83	46.711	Poecilia_formosa
ENSGAGG00000000865	SNRNP48	62	51.562	ENSPLAG00000002290	snrnp48	66	51.562	Poecilia_latipinna
ENSGAGG00000000865	SNRNP48	69	53.774	ENSPMEG00000018033	snrnp48	83	47.368	Poecilia_mexicana
ENSGAGG00000000865	SNRNP48	68	53.589	ENSPREG00000018541	snrnp48	83	48.355	Poecilia_reticulata
ENSGAGG00000000865	SNRNP48	96	62.290	ENSPPYG00000016209	SNRNP48	84	61.589	Pongo_abelii
ENSGAGG00000000865	SNRNP48	67	55.122	ENSPCAG00000011991	SNRNP48	78	54.286	Procavia_capensis
ENSGAGG00000000865	SNRNP48	96	64.527	ENSPVAG00000002854	SNRNP48	84	63.787	Pteropus_vampyrus
ENSGAGG00000000865	SNRNP48	68	51.442	ENSPNYG00000015399	snrnp48	84	45.329	Pundamilia_nyererei
ENSGAGG00000000865	SNRNP48	97	63.667	ENSRNOG00000013756	Snrnp48	84	63.667	Rattus_norvegicus
ENSGAGG00000000865	SNRNP48	89	64.364	ENSRBIG00000043856	SNRNP48	83	63.571	Rhinopithecus_bieti
ENSGAGG00000000865	SNRNP48	96	62.963	ENSRROG00000043229	SNRNP48	84	62.252	Rhinopithecus_roxellana
ENSGAGG00000000865	SNRNP48	96	62.963	ENSSBOG00000019486	SNRNP48	84	62.252	Saimiri_boliviensis_boliviensis
ENSGAGG00000000865	SNRNP48	97	71.854	ENSSHAG00000014483	SNRNP48	85	71.854	Sarcophilus_harrisii
ENSGAGG00000000865	SNRNP48	66	56.158	ENSSFOG00015006610	snrnp48	69	49.495	Scleropages_formosus
ENSGAGG00000000865	SNRNP48	81	51.406	ENSSDUG00000014953	snrnp48	83	47.351	Seriola_dumerili
ENSGAGG00000000865	SNRNP48	78	52.282	ENSSLDG00000005989	snrnp48	80	47.959	Seriola_lalandi_dorsalis
ENSGAGG00000000865	SNRNP48	100	75.563	ENSSPUG00000006257	SNRNP48	88	75.563	Sphenodon_punctatus
ENSGAGG00000000865	SNRNP48	78	49.793	ENSSPAG00000006454	snrnp48	82	45.000	Stegastes_partitus
ENSGAGG00000000865	SNRNP48	97	76.174	ENSTGUG00000007575	SNRNP48	93	76.174	Taeniopygia_guttata
ENSGAGG00000000865	SNRNP48	65	53.731	ENSTRUG00000007031	snrnp48	80	45.238	Takifugu_rubripes
ENSGAGG00000000865	SNRNP48	67	49.758	ENSTNIG00000012977	-	80	41.368	Tetraodon_nigroviridis
ENSGAGG00000000865	SNRNP48	68	70.000	ENSTBEG00000015620	SNRNP48	62	70.000	Tupaia_belangeri
ENSGAGG00000000865	SNRNP48	96	65.763	ENSTTRG00000016715	SNRNP48	84	65.333	Tursiops_truncatus
ENSGAGG00000000865	SNRNP48	97	63.907	ENSUAMG00000003690	SNRNP48	84	63.907	Ursus_americanus
ENSGAGG00000000865	SNRNP48	97	64.883	ENSVPAG00000003557	SNRNP48	99	64.883	Vicugna_pacos
ENSGAGG00000000865	SNRNP48	97	64.570	ENSVVUG00000004996	SNRNP48	84	64.570	Vulpes_vulpes
ENSGAGG00000000865	SNRNP48	85	61.364	ENSXETG00000020447	snrnp48	86	58.416	Xenopus_tropicalis
ENSGAGG00000000865	SNRNP48	63	53.093	ENSXCOG00000004478	snrnp48	59	53.093	Xiphophorus_couchianus
ENSGAGG00000000865	SNRNP48	69	53.774	ENSXMAG00000013595	snrnp48	83	46.358	Xiphophorus_maculatus