EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000001290 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 136444 bases
Position: chrPPEB01002854.1:56685-193128
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000001626	PUF	PF00806.19	2.9e-72	1	8
ENSGAGP00000001626	PUF	PF00806.19	2.9e-72	2	8
ENSGAGP00000001626	PUF	PF00806.19	2.9e-72	3	8
ENSGAGP00000001626	PUF	PF00806.19	2.9e-72	4	8
ENSGAGP00000001626	PUF	PF00806.19	2.9e-72	5	8
ENSGAGP00000001626	PUF	PF00806.19	2.9e-72	6	8
ENSGAGP00000001626	PUF	PF00806.19	2.9e-72	7	8
ENSGAGP00000001626	PUF	PF00806.19	2.9e-72	8	8
ENSGAGP00000001620	PUF	PF00806.19	3.4e-72	1	8
ENSGAGP00000001620	PUF	PF00806.19	3.4e-72	2	8
ENSGAGP00000001620	PUF	PF00806.19	3.4e-72	3	8
ENSGAGP00000001620	PUF	PF00806.19	3.4e-72	4	8
ENSGAGP00000001620	PUF	PF00806.19	3.4e-72	5	8
ENSGAGP00000001620	PUF	PF00806.19	3.4e-72	6	8
ENSGAGP00000001620	PUF	PF00806.19	3.4e-72	7	8
ENSGAGP00000001620	PUF	PF00806.19	3.4e-72	8	8
ENSGAGP00000001605	PUF	PF00806.19	7.4e-72	1	8
ENSGAGP00000001605	PUF	PF00806.19	7.4e-72	2	8
ENSGAGP00000001605	PUF	PF00806.19	7.4e-72	3	8
ENSGAGP00000001605	PUF	PF00806.19	7.4e-72	4	8
ENSGAGP00000001605	PUF	PF00806.19	7.4e-72	5	8
ENSGAGP00000001605	PUF	PF00806.19	7.4e-72	6	8
ENSGAGP00000001605	PUF	PF00806.19	7.4e-72	7	8
ENSGAGP00000001605	PUF	PF00806.19	7.4e-72	8	8
ENSGAGP00000001612	PUF	PF00806.19	7.4e-72	1	8
ENSGAGP00000001612	PUF	PF00806.19	7.4e-72	2	8
ENSGAGP00000001612	PUF	PF00806.19	7.4e-72	3	8
ENSGAGP00000001612	PUF	PF00806.19	7.4e-72	4	8
ENSGAGP00000001612	PUF	PF00806.19	7.4e-72	5	8
ENSGAGP00000001612	PUF	PF00806.19	7.4e-72	6	8
ENSGAGP00000001612	PUF	PF00806.19	7.4e-72	7	8
ENSGAGP00000001612	PUF	PF00806.19	7.4e-72	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000001840	PUM1-203	4631	-	ENSGAGP00000001620	1090 (aa)	-	-
ENSGAGT00000001846	PUM1-204	4444	-	ENSGAGP00000001626	1075 (aa)	-	-
ENSGAGT00000001825	PUM1-201	4928	-	ENSGAGP00000001605	1189 (aa)	-	-
ENSGAGT00000001832	PUM1-202	4928	-	ENSGAGP00000001612	1189 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000001290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000001290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000001290	PUM1	92	88.017	ENSGAGG00000020698	PUM2	93	86.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000001290	PUM1	100	98.583	ENSG00000134644	PUM1	100	97.637	Homo_sapiens
ENSGAGG00000001290	PUM1	99	91.807	ENSAPOG00000021632	pum1	100	91.807	Acanthochromis_polyacanthus
ENSGAGG00000001290	PUM1	99	98.586	ENSAMEG00000017656	PUM1	97	97.479	Ailuropoda_melanoleuca
ENSGAGG00000001290	PUM1	99	90.543	ENSACIG00000021013	pum1	96	90.543	Amphilophus_citrinellus
ENSGAGG00000001290	PUM1	99	91.807	ENSAOCG00000003944	pum1	100	91.807	Amphiprion_ocellaris
ENSGAGG00000001290	PUM1	99	91.807	ENSAPEG00000014550	pum1	100	91.807	Amphiprion_percula
ENSGAGG00000001290	PUM1	99	91.807	ENSATEG00000016004	pum1	100	91.807	Anabas_testudineus
ENSGAGG00000001290	PUM1	99	99.595	ENSAPLG00000009351	PUM1	100	98.486	Anas_platyrhynchos
ENSGAGG00000001290	PUM1	99	99.190	ENSACAG00000000682	PUM1	98	96.552	Anolis_carolinensis
ENSGAGG00000001290	PUM1	100	97.140	ENSANAG00000027865	PUM1	100	97.826	Aotus_nancymaae
ENSGAGG00000001290	PUM1	88	90.342	ENSACLG00000019354	pum1	96	90.342	Astatotilapia_calliptera
ENSGAGG00000001290	PUM1	98	93.333	ENSAMXG00000020607	pum1	93	92.727	Astyanax_mexicanus
ENSGAGG00000001290	PUM1	99	98.381	ENSBTAG00000018979	PUM1	100	98.792	Bos_taurus
ENSGAGG00000001290	PUM1	99	98.583	ENSCJAG00000006035	PUM1	100	98.068	Callithrix_jacchus
ENSGAGG00000001290	PUM1	100	98.785	ENSCAFG00000011205	PUM1	100	95.290	Canis_familiaris
ENSGAGG00000001290	PUM1	99	97.395	ENSCAFG00020024616	PUM1	98	98.309	Canis_lupus_dingo
ENSGAGG00000001290	PUM1	99	98.381	ENSCHIG00000012952	PUM1	100	98.309	Capra_hircus
ENSGAGG00000001290	PUM1	99	98.583	ENSTSYG00000008868	PUM1	100	97.388	Carlito_syrichta
ENSGAGG00000001290	PUM1	100	97.140	ENSCPOG00000031613	PUM1	100	97.388	Cavia_porcellus
ENSGAGG00000001290	PUM1	100	98.583	ENSCATG00000017991	PUM1	100	98.551	Cercocebus_atys
ENSGAGG00000001290	PUM1	100	97.225	ENSCLAG00000007662	PUM1	100	97.585	Chinchilla_lanigera
ENSGAGG00000001290	PUM1	99	98.583	ENSCSAG00000001028	PUM1	100	96.583	Chlorocebus_sabaeus
ENSGAGG00000001290	PUM1	93	93.678	ENSCHOG00000010245	PUM1	93	93.678	Choloepus_hoffmanni
ENSGAGG00000001290	PUM1	100	99.327	ENSCPBG00000009288	PUM1	100	99.517	Chrysemys_picta_bellii
ENSGAGG00000001290	PUM1	100	98.583	ENSCANG00000042606	PUM1	100	98.068	Colobus_angolensis_palliatus
ENSGAGG00000001290	PUM1	100	96.552	ENSCGRG00001024949	Pum1	100	96.766	Cricetulus_griseus_chok1gshd
ENSGAGG00000001290	PUM1	100	96.552	ENSCGRG00000014197	Pum1	100	96.766	Cricetulus_griseus_crigri
ENSGAGG00000001290	PUM1	88	89.940	ENSCSEG00000015981	pum1	96	89.940	Cynoglossus_semilaevis
ENSGAGG00000001290	PUM1	99	90.141	ENSCVAG00000007043	pum1	96	90.141	Cyprinodon_variegatus
ENSGAGG00000001290	PUM1	98	93.333	ENSDARG00000099256	pum1	96	93.247	Danio_rerio
ENSGAGG00000001290	PUM1	99	98.178	ENSDNOG00000010939	PUM1	100	97.056	Dasypus_novemcinctus
ENSGAGG00000001290	PUM1	94	97.585	ENSDORG00000001875	Pum1	100	97.585	Dipodomys_ordii
ENSGAGG00000001290	PUM1	97	92.585	ENSETEG00000004355	PUM1	87	92.585	Echinops_telfairi
ENSGAGG00000001290	PUM1	99	98.583	ENSEASG00005010813	PUM1	100	97.140	Equus_asinus_asinus
ENSGAGG00000001290	PUM1	99	98.583	ENSECAG00000021369	PUM1	100	97.140	Equus_caballus
ENSGAGG00000001290	PUM1	83	99.111	ENSEEUG00000003871	PUM1	74	99.111	Erinaceus_europaeus
ENSGAGG00000001290	PUM1	99	92.137	ENSELUG00000002409	pum1	93	92.137	Esox_lucius
ENSGAGG00000001290	PUM1	99	98.785	ENSFCAG00000010374	PUM1	100	98.792	Felis_catus
ENSGAGG00000001290	PUM1	100	99.595	ENSFALG00000001214	PUM1	97	96.817	Ficedula_albicollis
ENSGAGG00000001290	PUM1	100	97.140	ENSFDAG00000011319	PUM1	100	97.264	Fukomys_damarensis
ENSGAGG00000001290	PUM1	100	90.543	ENSGMOG00000010491	pum1	91	90.543	Gadus_morhua
ENSGAGG00000001290	PUM1	99	99.798	ENSGALG00000042598	PUM1	99	99.798	Gallus_gallus
ENSGAGG00000001290	PUM1	99	90.141	ENSGAFG00000015617	pum1	100	91.325	Gambusia_affinis
ENSGAGG00000001290	PUM1	99	90.342	ENSGACG00000005717	pum1	96	90.342	Gasterosteus_aculeatus
ENSGAGG00000001290	PUM1	99	98.583	ENSGGOG00000011983	PUM1	100	98.068	Gorilla_gorilla
ENSGAGG00000001290	PUM1	99	90.342	ENSHBUG00000018718	pum1	96	90.342	Haplochromis_burtoni
ENSGAGG00000001290	PUM1	100	96.972	ENSHGLG00000013819	Pum1	100	97.139	Heterocephalus_glaber_female
ENSGAGG00000001290	PUM1	100	96.972	ENSHGLG00100008621	Pum1	100	97.139	Heterocephalus_glaber_male
ENSGAGG00000001290	PUM1	88	84.274	ENSHCOG00000005149	pum1	96	83.065	Hippocampus_comes
ENSGAGG00000001290	PUM1	98	92.500	ENSIPUG00000020421	pum1	95	92.105	Ictalurus_punctatus
ENSGAGG00000001290	PUM1	100	97.225	ENSSTOG00000010757	PUM1	100	97.388	Ictidomys_tridecemlineatus
ENSGAGG00000001290	PUM1	99	97.976	ENSJJAG00000000530	Pum1	100	96.804	Jaculus_jaculus
ENSGAGG00000001290	PUM1	99	89.940	ENSKMAG00000003481	pum1	96	89.940	Kryptolebias_marmoratus
ENSGAGG00000001290	PUM1	99	89.919	ENSLBEG00000002527	pum1	96	89.919	Labrus_bergylta
ENSGAGG00000001290	PUM1	99	89.537	ENSLACG00000017188	PUM1	99	87.094	Latimeria_chalumnae
ENSGAGG00000001290	PUM1	99	96.761	ENSLOCG00000005210	pum1	92	96.761	Lepisosteus_oculatus
ENSGAGG00000001290	PUM1	99	98.178	ENSLAFG00000003178	PUM1	100	97.056	Loxodonta_africana
ENSGAGG00000001290	PUM1	99	98.583	ENSMFAG00000010291	PUM1	100	98.551	Macaca_fascicularis
ENSGAGG00000001290	PUM1	99	98.583	ENSMMUG00000013520	PUM1	100	98.068	Macaca_mulatta
ENSGAGG00000001290	PUM1	99	98.583	ENSMNEG00000034639	PUM1	100	98.068	Macaca_nemestrina
ENSGAGG00000001290	PUM1	100	98.583	ENSMLEG00000038743	PUM1	100	98.068	Mandrillus_leucophaeus
ENSGAGG00000001290	PUM1	99	90.141	ENSMAMG00000011606	pum1	96	90.141	Mastacembelus_armatus
ENSGAGG00000001290	PUM1	99	90.342	ENSMZEG00005005834	pum1	96	90.342	Maylandia_zebra
ENSGAGG00000001290	PUM1	99	99.798	ENSMGAG00000000724	PUM1	100	98.486	Meleagris_gallopavo
ENSGAGG00000001290	PUM1	99	98.178	ENSMAUG00000022090	Pum1	100	96.891	Mesocricetus_auratus
ENSGAGG00000001290	PUM1	99	95.344	ENSMICG00000012213	-	100	94.928	Microcebus_murinus
ENSGAGG00000001290	PUM1	99	98.785	ENSMICG00000007713	-	100	98.309	Microcebus_murinus
ENSGAGG00000001290	PUM1	99	97.976	ENSMOCG00000015463	Pum1	100	96.766	Microtus_ochrogaster
ENSGAGG00000001290	PUM1	99	88.506	ENSMMOG00000019817	pum1	100	91.566	Mola_mola
ENSGAGG00000001290	PUM1	99	99.190	ENSMODG00000017067	PUM1	100	97.817	Monodelphis_domestica
ENSGAGG00000001290	PUM1	99	88.736	ENSMALG00000016399	pum1	100	91.807	Monopterus_albus
ENSGAGG00000001290	PUM1	100	96.636	MGP_CAROLIEiJ_G0026549	Pum1	100	96.766	Mus_caroli
ENSGAGG00000001290	PUM1	100	96.720	ENSMUSG00000028580	Pum1	100	96.720	Mus_musculus
ENSGAGG00000001290	PUM1	100	96.552	MGP_PahariEiJ_G0028881	Pum1	100	96.642	Mus_pahari
ENSGAGG00000001290	PUM1	100	96.636	MGP_SPRETEiJ_G0027529	Pum1	100	96.642	Mus_spretus
ENSGAGG00000001290	PUM1	99	98.785	ENSMPUG00000015454	PUM1	100	97.393	Mustela_putorius_furo
ENSGAGG00000001290	PUM1	99	98.381	ENSMLUG00000006490	PUM1	100	97.140	Myotis_lucifugus
ENSGAGG00000001290	PUM1	99	98.178	ENSNGAG00000002378	Pum1	100	97.512	Nannospalax_galili
ENSGAGG00000001290	PUM1	77	92.308	ENSNBRG00000010689	pum1	100	82.984	Neolamprologus_brichardi
ENSGAGG00000001290	PUM1	100	96.047	ENSNLEG00000001151	PUM1	100	95.833	Nomascus_leucogenys
ENSGAGG00000001290	PUM1	84	95.946	ENSMEUG00000000976	-	82	95.946	Notamacropus_eugenii
ENSGAGG00000001290	PUM1	90	98.131	ENSOPRG00000001776	PUM1	75	98.131	Ochotona_princeps
ENSGAGG00000001290	PUM1	100	96.972	ENSODEG00000003465	PUM1	100	97.264	Octodon_degus
ENSGAGG00000001290	PUM1	100	89.800	ENSONIG00000002290	pum1	96	90.543	Oreochromis_niloticus
ENSGAGG00000001290	PUM1	90	77.120	ENSOANG00000004902	-	100	75.792	Ornithorhynchus_anatinus
ENSGAGG00000001290	PUM1	100	96.804	ENSOCUG00000008641	PUM1	99	96.804	Oryctolagus_cuniculus
ENSGAGG00000001290	PUM1	99	91.952	ENSORLG00000011482	pum1	96	90.342	Oryzias_latipes
ENSGAGG00000001290	PUM1	99	92.153	ENSORLG00020019461	pum1	96	90.543	Oryzias_latipes_hni
ENSGAGG00000001290	PUM1	99	92.153	ENSORLG00015011375	pum1	96	90.543	Oryzias_latipes_hsok
ENSGAGG00000001290	PUM1	99	93.494	ENSOMEG00000009312	pum1	100	91.566	Oryzias_melastigma
ENSGAGG00000001290	PUM1	99	96.441	ENSOGAG00000011063	PUM1	100	94.458	Otolemur_garnettii
ENSGAGG00000001290	PUM1	100	96.552	ENSOARG00000001899	PUM1	100	98.309	Ovis_aries
ENSGAGG00000001290	PUM1	99	98.583	ENSPPAG00000044003	PUM1	100	98.068	Pan_paniscus
ENSGAGG00000001290	PUM1	99	98.785	ENSPPRG00000001370	PUM1	100	97.761	Panthera_pardus
ENSGAGG00000001290	PUM1	99	98.785	ENSPTIG00000010798	PUM1	100	97.512	Panthera_tigris_altaica
ENSGAGG00000001290	PUM1	99	98.583	ENSPTRG00000000453	PUM1	100	98.068	Pan_troglodytes
ENSGAGG00000001290	PUM1	99	98.583	ENSPANG00000016338	PUM1	100	98.551	Papio_anubis
ENSGAGG00000001290	PUM1	99	92.510	ENSPKIG00000010578	pum1	93	92.510	Paramormyrops_kingsleyae
ENSGAGG00000001290	PUM1	100	99.159	ENSPSIG00000014118	PUM1	100	99.159	Pelodiscus_sinensis
ENSGAGG00000001290	PUM1	77	92.308	ENSPMGG00000005836	pum1	93	90.574	Periophthalmus_magnuspinnatus
ENSGAGG00000001290	PUM1	99	98.178	ENSPEMG00000010009	Pum1	100	96.891	Peromyscus_maniculatus_bairdii
ENSGAGG00000001290	PUM1	99	99.190	ENSPCIG00000014151	PUM1	100	99.034	Phascolarctos_cinereus
ENSGAGG00000001290	PUM1	94	90.141	ENSPFOG00000007289	pum1	96	90.141	Poecilia_formosa
ENSGAGG00000001290	PUM1	99	90.141	ENSPLAG00000007256	pum1	96	90.141	Poecilia_latipinna
ENSGAGG00000001290	PUM1	89	90.141	ENSPMEG00000019543	pum1	95	90.141	Poecilia_mexicana
ENSGAGG00000001290	PUM1	99	90.141	ENSPREG00000005195	pum1	96	90.141	Poecilia_reticulata
ENSGAGG00000001290	PUM1	99	98.583	ENSPPYG00000001621	PUM1	100	95.466	Pongo_abelii
ENSGAGG00000001290	PUM1	78	98.765	ENSPCAG00000001979	PUM1	74	98.765	Procavia_capensis
ENSGAGG00000001290	PUM1	99	98.785	ENSPCOG00000004398	PUM1	100	98.309	Propithecus_coquereli
ENSGAGG00000001290	PUM1	100	95.206	ENSPVAG00000005207	PUM1	97	95.206	Pteropus_vampyrus
ENSGAGG00000001290	PUM1	99	90.342	ENSPNYG00000009518	pum1	96	90.342	Pundamilia_nyererei
ENSGAGG00000001290	PUM1	98	93.542	ENSPNAG00000026728	pum1	96	92.929	Pygocentrus_nattereri
ENSGAGG00000001290	PUM1	100	96.468	ENSRNOG00000011709	Pum1	100	96.468	Rattus_norvegicus
ENSGAGG00000001290	PUM1	99	98.583	ENSRBIG00000042521	PUM1	100	98.551	Rhinopithecus_bieti
ENSGAGG00000001290	PUM1	99	98.583	ENSRROG00000020156	PUM1	100	98.068	Rhinopithecus_roxellana
ENSGAGG00000001290	PUM1	99	98.583	ENSSBOG00000032037	PUM1	100	98.068	Saimiri_boliviensis_boliviensis
ENSGAGG00000001290	PUM1	99	99.190	ENSSHAG00000010918	PUM1	100	97.733	Sarcophilus_harrisii
ENSGAGG00000001290	PUM1	99	90.543	ENSSMAG00000010918	pum1	100	91.807	Scophthalmus_maximus
ENSGAGG00000001290	PUM1	99	90.342	ENSSDUG00000009021	pum1	96	90.342	Seriola_dumerili
ENSGAGG00000001290	PUM1	95	90.342	ENSSLDG00000009667	pum1	96	90.342	Seriola_lalandi_dorsalis
ENSGAGG00000001290	PUM1	93	98.583	ENSSARG00000003055	PUM1	91	96.753	Sorex_araneus
ENSGAGG00000001290	PUM1	99	99.595	ENSSPUG00000006267	PUM1	100	97.897	Sphenodon_punctatus
ENSGAGG00000001290	PUM1	99	91.807	ENSSPAG00000016636	pum1	100	91.807	Stegastes_partitus
ENSGAGG00000001290	PUM1	100	98.178	ENSSSCG00000003591	PUM1	100	98.792	Sus_scrofa
ENSGAGG00000001290	PUM1	99	90.342	ENSTRUG00000013121	pum1	96	90.342	Takifugu_rubripes
ENSGAGG00000001290	PUM1	99	90.161	ENSTNIG00000016983	pum1	96	90.161	Tetraodon_nigroviridis
ENSGAGG00000001290	PUM1	87	93.902	ENSTBEG00000013810	PUM1	89	93.902	Tupaia_belangeri
ENSGAGG00000001290	PUM1	99	97.386	ENSTTRG00000007436	PUM1	90	97.630	Tursiops_truncatus
ENSGAGG00000001290	PUM1	99	96.866	ENSUAMG00000018262	-	100	96.866	Ursus_americanus
ENSGAGG00000001290	PUM1	95	98.792	ENSUMAG00000009211	PUM1	100	98.792	Ursus_maritimus
ENSGAGG00000001290	PUM1	92	98.259	ENSVPAG00000005902	PUM1	92	98.259	Vicugna_pacos
ENSGAGG00000001290	PUM1	99	98.785	ENSVVUG00000014631	PUM1	100	98.792	Vulpes_vulpes
ENSGAGG00000001290	PUM1	99	90.891	ENSXETG00000012904	pum1	99	87.238	Xenopus_tropicalis
ENSGAGG00000001290	PUM1	99	90.141	ENSXMAG00000002945	pum1	96	90.141	Xiphophorus_maculatus