EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000001300 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 4968 bases
Position: chrPPEB01012400.1:122-5089
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000002196	DEAD	PF00270.29	7.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000002505	-	1188	-	ENSGAGP00000002196	395 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000001300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000001300's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000001300	-	80	93.354	ENSGAGG00000007527	DDX39A	74	93.354
ENSGAGG00000001300	-	73	31.757	ENSGAGG00000018601	DDX41	50	31.757
ENSGAGG00000001300	-	82	34.242	ENSGAGG00000005277	EIF4A1	82	33.939
ENSGAGG00000001300	-	79	36.218	ENSGAGG00000016434	EIF4A3	76	36.218
ENSGAGG00000001300	-	78	33.648	ENSGAGG00000023801	DDX47	63	33.648
ENSGAGG00000001300	-	77	32.051	ENSGAGG00000015704	-	61	32.051
ENSGAGG00000001300	-	82	31.402	ENSGAGG00000004207	-	50	30.612
ENSGAGG00000001300	-	87	33.333	ENSGAGG00000020608	DDX6	64	35.144
ENSGAGG00000001300	-	74	30.100	ENSGAGG00000015750	DDX25	70	30.100
ENSGAGG00000001300	-	76	31.068	ENSGAGG00000022213	DDX49	64	31.068
ENSGAGG00000001300	-	82	35.152	ENSGAGG00000019478	EIF4A2	74	36.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000001300	-	80	99.684	ENSG00000198563	DDX39B	95	100.000	Homo_sapiens
ENSGAGG00000001300	-	80	99.684	ENSAMEG00000009508	DDX39B	74	99.684	Ailuropoda_melanoleuca
ENSGAGG00000001300	-	79	96.463	ENSACIG00000004534	ddx39b	72	96.463	Amphilophus_citrinellus
ENSGAGG00000001300	-	80	95.570	ENSATEG00000012366	ddx39b	73	95.570	Anabas_testudineus
ENSGAGG00000001300	-	80	99.369	ENSACAG00000012240	DDX39B	74	99.369	Anolis_carolinensis
ENSGAGG00000001300	-	80	99.684	ENSANAG00000030372	DDX39B	77	99.684	Aotus_nancymaae
ENSGAGG00000001300	-	80	93.968	ENSACLG00000018759	ddx39b	72	93.968	Astatotilapia_calliptera
ENSGAGG00000001300	-	80	96.203	ENSAMXG00000017837	ddx39b	72	96.203	Astyanax_mexicanus
ENSGAGG00000001300	-	80	100.000	ENSBTAG00000014490	DDX39B	74	100.000	Bos_taurus
ENSGAGG00000001300	-	80	99.684	ENSCJAG00000003152	DDX39B	74	99.684	Callithrix_jacchus
ENSGAGG00000001300	-	80	99.684	ENSCAFG00000000509	DDX39B	100	99.677	Canis_familiaris
ENSGAGG00000001300	-	80	99.684	ENSCAFG00020020530	DDX39B	74	99.684	Canis_lupus_dingo
ENSGAGG00000001300	-	80	100.000	ENSCHIG00000004579	DDX39B	74	100.000	Capra_hircus
ENSGAGG00000001300	-	80	84.177	ENSTSYG00000029741	-	77	84.177	Carlito_syrichta
ENSGAGG00000001300	-	98	82.836	ENSTSYG00000010226	-	97	82.836	Carlito_syrichta
ENSGAGG00000001300	-	80	99.367	ENSCAPG00000010066	DDX39B	74	99.367	Cavia_aperea
ENSGAGG00000001300	-	80	99.367	ENSCPOG00000002335	DDX39B	74	99.367	Cavia_porcellus
ENSGAGG00000001300	-	80	99.684	ENSCCAG00000027897	DDX39B	76	99.684	Cebus_capucinus
ENSGAGG00000001300	-	73	92.388	ENSCATG00000043709	DDX39B	78	85.366	Cercocebus_atys
ENSGAGG00000001300	-	80	99.367	ENSCLAG00000014555	DDX39B	74	99.367	Chinchilla_lanigera
ENSGAGG00000001300	-	79	99.361	ENSCSAG00000008517	DDX39B	74	99.361	Chlorocebus_sabaeus
ENSGAGG00000001300	-	69	100.000	ENSCPBG00000014671	-	100	100.000	Chrysemys_picta_bellii
ENSGAGG00000001300	-	80	99.684	ENSCANG00000041217	DDX39B	76	99.684	Colobus_angolensis_palliatus
ENSGAGG00000001300	-	79	82.803	ENSCGRG00001021916	-	77	82.803	Cricetulus_griseus_chok1gshd
ENSGAGG00000001300	-	80	96.519	ENSDARG00000036069	ddx39b	73	96.519	Danio_rerio
ENSGAGG00000001300	-	80	99.684	ENSDNOG00000010215	DDX39B	74	99.684	Dasypus_novemcinctus
ENSGAGG00000001300	-	74	97.611	ENSDORG00000004985	Ddx39b	71	99.618	Dipodomys_ordii
ENSGAGG00000001300	-	66	81.679	ENSETEG00000009649	DDX39B	61	81.679	Echinops_telfairi
ENSGAGG00000001300	-	80	99.684	ENSEASG00005017156	DDX39B	74	99.684	Equus_asinus_asinus
ENSGAGG00000001300	-	80	99.684	ENSECAG00000007750	DDX39B	74	99.684	Equus_caballus
ENSGAGG00000001300	-	80	95.570	ENSELUG00000017904	ddx39b	73	95.570	Esox_lucius
ENSGAGG00000001300	-	80	99.684	ENSFCAG00000004497	DDX39B	74	99.684	Felis_catus
ENSGAGG00000001300	-	80	99.367	ENSFDAG00000011074	DDX39B	74	99.367	Fukomys_damarensis
ENSGAGG00000001300	-	80	99.684	ENSGGOG00000005989	DDX39B	76	99.684	Gorilla_gorilla
ENSGAGG00000001300	-	80	99.367	ENSHGLG00000019248	DDX39B	74	99.367	Heterocephalus_glaber_female
ENSGAGG00000001300	-	80	99.367	ENSHGLG00100011850	DDX39B	74	99.367	Heterocephalus_glaber_male
ENSGAGG00000001300	-	80	95.570	ENSIPUG00000015733	DDX39B	68	95.570	Ictalurus_punctatus
ENSGAGG00000001300	-	80	99.051	ENSSTOG00000012838	DDX39B	74	99.051	Ictidomys_tridecemlineatus
ENSGAGG00000001300	-	80	99.367	ENSJJAG00000005660	-	74	99.367	Jaculus_jaculus
ENSGAGG00000001300	-	79	80.064	ENSLBEG00000012254	ddx39b	72	80.064	Labrus_bergylta
ENSGAGG00000001300	-	51	76.000	ENSLBEG00000017177	-	57	76.000	Labrus_bergylta
ENSGAGG00000001300	-	82	96.073	ENSLACG00000002110	DDX39B	76	96.073	Latimeria_chalumnae
ENSGAGG00000001300	-	80	99.367	ENSLAFG00000014202	DDX39B	74	99.367	Loxodonta_africana
ENSGAGG00000001300	-	80	99.684	ENSMFAG00000034233	DDX39B	76	99.684	Macaca_fascicularis
ENSGAGG00000001300	-	80	99.684	ENSMMUG00000008839	DDX39B	76	99.684	Macaca_mulatta
ENSGAGG00000001300	-	80	99.684	ENSMNEG00000041059	DDX39B	76	99.684	Macaca_nemestrina
ENSGAGG00000001300	-	80	99.684	ENSMLEG00000043791	DDX39B	76	99.684	Mandrillus_leucophaeus
ENSGAGG00000001300	-	80	93.968	ENSMZEG00005017654	ddx39b	72	93.968	Maylandia_zebra
ENSGAGG00000001300	-	80	99.367	ENSMAUG00000008059	Ddx39b	74	99.367	Mesocricetus_auratus
ENSGAGG00000001300	-	80	99.684	ENSMICG00000017349	DDX39B	74	99.684	Microcebus_murinus
ENSGAGG00000001300	-	80	99.684	ENSMOCG00000011169	Ddx39b	74	99.684	Microtus_ochrogaster
ENSGAGG00000001300	-	67	99.242	ENSMODG00000015791	DDX39B	62	99.242	Monodelphis_domestica
ENSGAGG00000001300	-	80	99.684	ENSMUSG00000019432	Ddx39b	80	99.153	Mus_musculus
ENSGAGG00000001300	-	80	99.684	MGP_PahariEiJ_G0020513	Ddx39b	80	99.153	Mus_pahari
ENSGAGG00000001300	-	80	99.684	MGP_SPRETEiJ_G0022424	Ddx39b	74	99.684	Mus_spretus
ENSGAGG00000001300	-	80	99.684	ENSMPUG00000011407	DDX39B	74	99.684	Mustela_putorius_furo
ENSGAGG00000001300	-	79	99.678	ENSMLUG00000001681	DDX39B	100	99.678	Myotis_lucifugus
ENSGAGG00000001300	-	80	99.684	ENSNGAG00000022948	Ddx39b	74	99.684	Nannospalax_galili
ENSGAGG00000001300	-	73	99.306	ENSNLEG00000006094	DDX39B	81	99.306	Nomascus_leucogenys
ENSGAGG00000001300	-	64	100.000	ENSMEUG00000008264	DDX39B	59	100.000	Notamacropus_eugenii
ENSGAGG00000001300	-	80	99.684	ENSOPRG00000011923	DDX39B	74	99.684	Ochotona_princeps
ENSGAGG00000001300	-	80	99.367	ENSODEG00000018083	DDX39B	74	99.367	Octodon_degus
ENSGAGG00000001300	-	80	94.304	ENSONIG00000004740	ddx39b	73	94.304	Oreochromis_niloticus
ENSGAGG00000001300	-	80	99.365	ENSOCUG00000024126	DDX39B	71	99.365	Oryctolagus_cuniculus
ENSGAGG00000001300	-	79	98.083	ENSOGAG00000009067	-	97	98.083	Otolemur_garnettii
ENSGAGG00000001300	-	80	98.423	ENSOGAG00000028850	-	74	98.423	Otolemur_garnettii
ENSGAGG00000001300	-	80	100.000	ENSOARG00000008787	DDX39B	72	100.000	Ovis_aries
ENSGAGG00000001300	-	80	99.684	ENSPPAG00000043072	DDX39B	76	99.684	Pan_paniscus
ENSGAGG00000001300	-	80	99.684	ENSPPRG00000001913	DDX39B	76	99.684	Panthera_pardus
ENSGAGG00000001300	-	80	99.367	ENSPTIG00000017669	DDX39B	74	99.367	Panthera_tigris_altaica
ENSGAGG00000001300	-	91	90.000	ENSPTRG00000032509	DDX39B	76	99.684	Pan_troglodytes
ENSGAGG00000001300	-	80	99.684	ENSPANG00000018609	DDX39B	76	99.684	Papio_anubis
ENSGAGG00000001300	-	80	95.570	ENSPKIG00000011324	ddx39b	72	95.570	Paramormyrops_kingsleyae
ENSGAGG00000001300	-	80	99.684	ENSPEMG00000016905	Ddx39b	74	99.684	Peromyscus_maniculatus_bairdii
ENSGAGG00000001300	-	80	99.684	ENSPCIG00000017572	DDX39B	74	99.684	Phascolarctos_cinereus
ENSGAGG00000001300	-	80	99.684	ENSPPYG00000016433	DDX39B	74	99.684	Pongo_abelii
ENSGAGG00000001300	-	72	99.648	ENSPCAG00000003484	DDX39B	100	99.648	Procavia_capensis
ENSGAGG00000001300	-	80	99.684	ENSPCOG00000018656	DDX39B	74	99.684	Propithecus_coquereli
ENSGAGG00000001300	-	80	99.684	ENSPVAG00000004653	DDX39B	74	99.684	Pteropus_vampyrus
ENSGAGG00000001300	-	79	81.994	ENSPNYG00000010382	ddx39b	70	81.994	Pundamilia_nyererei
ENSGAGG00000001300	-	80	96.203	ENSPNAG00000026926	ddx39b	72	96.203	Pygocentrus_nattereri
ENSGAGG00000001300	-	80	99.684	ENSRNOG00000000841	Ddx39b	74	99.684	Rattus_norvegicus
ENSGAGG00000001300	-	80	85.759	ENSRBIG00000031309	DDX39B	71	85.759	Rhinopithecus_bieti
ENSGAGG00000001300	-	80	99.684	ENSRROG00000039517	DDX39B	76	99.684	Rhinopithecus_roxellana
ENSGAGG00000001300	-	80	85.759	ENSSBOG00000035513	-	71	85.759	Saimiri_boliviensis_boliviensis
ENSGAGG00000001300	-	80	99.684	ENSSHAG00000003209	DDX39B	74	99.684	Sarcophilus_harrisii
ENSGAGG00000001300	-	80	95.570	ENSSFOG00015016107	ddx39b	73	95.570	Scleropages_formosus
ENSGAGG00000001300	-	80	96.203	ENSSDUG00000011557	ddx39b	73	96.203	Seriola_dumerili
ENSGAGG00000001300	-	80	95.886	ENSSLDG00000015763	ddx39b	73	95.886	Seriola_lalandi_dorsalis
ENSGAGG00000001300	-	66	82.824	ENSSARG00000005245	DDX39B	70	82.824	Sorex_araneus
ENSGAGG00000001300	-	80	99.684	ENSSPUG00000012805	DDX39B	74	99.684	Sphenodon_punctatus
ENSGAGG00000001300	-	80	99.684	ENSSSCG00000001400	DDX39B	91	99.684	Sus_scrofa
ENSGAGG00000001300	-	72	76.056	ENSTBEG00000003721	DDX39B	66	76.056	Tupaia_belangeri
ENSGAGG00000001300	-	80	88.162	ENSTTRG00000014074	DDX39B	74	88.162	Tursiops_truncatus
ENSGAGG00000001300	-	80	82.390	ENSUAMG00000027335	DDX39B	73	82.390	Ursus_americanus
ENSGAGG00000001300	-	80	94.620	ENSUMAG00000015124	DDX39B	77	94.620	Ursus_maritimus
ENSGAGG00000001300	-	80	99.684	ENSVVUG00000019518	DDX39B	73	99.684	Vulpes_vulpes
ENSGAGG00000001300	-	80	83.019	ENSXETG00000002498	ddx39b	85	74.064	Xenopus_tropicalis