EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000001308 (Gene tree)
Gene ID: -
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 3589 bases
Position: chrPPEB01009552.1:48530-52118
Accession: 11153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000001638	LSM	PF01423.22	7.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000001859	SNRPB-201	874	-	ENSGAGP00000001638	240 (aa)	-	UPI00038914E4

Gene Model

Click here to download ENSGAGG00000001308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000001308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000001308	SNRPB	100	96.667	ENSG00000125835	SNRPB	100	96.667	Homo_sapiens
ENSGAGG00000001308	SNRPB	75	93.923	ENSAPOG00000019606	snrpb	56	96.429	Acanthochromis_polyacanthus
ENSGAGG00000001308	SNRPB	99	96.653	ENSAMEG00000011353	SNRPB	98	96.653	Ailuropoda_melanoleuca
ENSGAGG00000001308	SNRPB	73	93.714	ENSACIG00000014480	snrpb	71	96.296	Amphilophus_citrinellus
ENSGAGG00000001308	SNRPB	75	93.923	ENSAOCG00000006876	snrpb	69	96.429	Amphiprion_ocellaris
ENSGAGG00000001308	SNRPB	75	93.923	ENSAPEG00000021585	snrpb	71	96.429	Amphiprion_percula
ENSGAGG00000001308	SNRPB	75	93.370	ENSATEG00000009836	snrpb	69	95.833	Anabas_testudineus
ENSGAGG00000001308	SNRPB	97	98.276	ENSACAG00000002053	SNRPB	100	98.276	Anolis_carolinensis
ENSGAGG00000001308	SNRPB	96	89.177	ENSANAG00000036271	-	76	89.947	Aotus_nancymaae
ENSGAGG00000001308	SNRPB	100	96.667	ENSANAG00000024443	-	100	96.667	Aotus_nancymaae
ENSGAGG00000001308	SNRPB	75	93.923	ENSACLG00000014707	snrpb	69	96.429	Astatotilapia_calliptera
ENSGAGG00000001308	SNRPB	76	93.989	ENSAMXG00000029434	snrpb	70	95.833	Astyanax_mexicanus
ENSGAGG00000001308	SNRPB	95	96.070	ENSBTAG00000001038	SNRPB	99	96.070	Bos_taurus
ENSGAGG00000001308	SNRPB	89	88.318	ENSCJAG00000023097	-	79	88.889	Callithrix_jacchus
ENSGAGG00000001308	SNRPB	95	96.507	ENSCJAG00000020971	-	99	96.507	Callithrix_jacchus
ENSGAGG00000001308	SNRPB	78	85.263	ENSCAFG00000031109	-	79	82.105	Canis_familiaris
ENSGAGG00000001308	SNRPB	95	96.507	ENSCAFG00000006693	-	99	96.507	Canis_familiaris
ENSGAGG00000001308	SNRPB	100	96.667	ENSCAFG00020016981	-	100	96.667	Canis_lupus_dingo
ENSGAGG00000001308	SNRPB	95	96.070	ENSCHIG00000025449	-	99	96.070	Capra_hircus
ENSGAGG00000001308	SNRPB	97	72.845	ENSTSYG00000032303	-	55	76.667	Carlito_syrichta
ENSGAGG00000001308	SNRPB	95	96.507	ENSTSYG00000014498	-	99	96.507	Carlito_syrichta
ENSGAGG00000001308	SNRPB	99	96.653	ENSCAPG00000012669	SNRPB	99	96.653	Cavia_aperea
ENSGAGG00000001308	SNRPB	95	96.507	ENSCPOG00000039408	SNRPB	99	96.507	Cavia_porcellus
ENSGAGG00000001308	SNRPB	53	84.252	ENSCCAG00000035140	-	89	84.314	Cebus_capucinus
ENSGAGG00000001308	SNRPB	100	96.667	ENSCCAG00000026002	SNRPB	100	96.667	Cebus_capucinus
ENSGAGG00000001308	SNRPB	95	96.507	ENSCATG00000030230	SNRPB	99	96.507	Cercocebus_atys
ENSGAGG00000001308	SNRPB	100	95.417	ENSCLAG00000012442	SNRPB	100	95.417	Chinchilla_lanigera
ENSGAGG00000001308	SNRPB	95	96.507	ENSCSAG00000010840	SNRPB	99	96.507	Chlorocebus_sabaeus
ENSGAGG00000001308	SNRPB	100	100.000	ENSCPBG00000026801	SNRPB	100	100.000	Chrysemys_picta_bellii
ENSGAGG00000001308	SNRPB	100	96.667	ENSCANG00000019461	SNRPB	100	96.667	Colobus_angolensis_palliatus
ENSGAGG00000001308	SNRPB	95	96.507	ENSCGRG00001023046	Snrpb	99	96.507	Cricetulus_griseus_chok1gshd
ENSGAGG00000001308	SNRPB	92	96.380	ENSCGRG00000010423	Snrpb	98	96.380	Cricetulus_griseus_crigri
ENSGAGG00000001308	SNRPB	76	93.443	ENSCSEG00000020328	snrpb	70	96.429	Cynoglossus_semilaevis
ENSGAGG00000001308	SNRPB	70	94.643	ENSDARG00000011125	snrpb	69	96.429	Danio_rerio
ENSGAGG00000001308	SNRPB	100	96.667	ENSDNOG00000015545	-	100	96.667	Dasypus_novemcinctus
ENSGAGG00000001308	SNRPB	92	91.855	ENSDNOG00000007896	-	91	91.855	Dasypus_novemcinctus
ENSGAGG00000001308	SNRPB	96	96.087	ENSDORG00000029558	Snrpb	100	96.087	Dipodomys_ordii
ENSGAGG00000001308	SNRPB	62	70.470	FBgn0262601	SmB	74	70.470	Drosophila_melanogaster
ENSGAGG00000001308	SNRPB	76	77.049	ENSETEG00000006830	SNRPB	74	76.190	Echinops_telfairi
ENSGAGG00000001308	SNRPB	75	81.183	ENSEBUG00000007467	SNRPB	62	89.933	Eptatretus_burgeri
ENSGAGG00000001308	SNRPB	95	96.070	ENSEASG00005012991	SNRPB	99	96.070	Equus_asinus_asinus
ENSGAGG00000001308	SNRPB	95	96.507	ENSECAG00000011944	SNRPB	99	96.507	Equus_caballus
ENSGAGG00000001308	SNRPB	100	88.189	ENSEEUG00000015568	SNRPB	78	96.380	Erinaceus_europaeus
ENSGAGG00000001308	SNRPB	100	96.250	ENSELUG00000014564	snrpb	100	96.250	Esox_lucius
ENSGAGG00000001308	SNRPB	95	96.507	ENSFCAG00000034090	-	99	96.507	Felis_catus
ENSGAGG00000001308	SNRPB	97	99.569	ENSFALG00000004866	SNRPB	100	99.569	Ficedula_albicollis
ENSGAGG00000001308	SNRPB	99	96.653	ENSFDAG00000009937	SNRPB	99	96.507	Fukomys_damarensis
ENSGAGG00000001308	SNRPB	100	99.583	ENSGALG00000035421	SNRPN	100	99.583	Gallus_gallus
ENSGAGG00000001308	SNRPB	72	94.186	ENSGAFG00000019558	snrpb	72	95.808	Gambusia_affinis
ENSGAGG00000001308	SNRPB	76	92.896	ENSGACG00000003262	snrpb	70	96.429	Gasterosteus_aculeatus
ENSGAGG00000001308	SNRPB	95	96.507	ENSGGOG00000016138	SNRPB	99	96.507	Gorilla_gorilla
ENSGAGG00000001308	SNRPB	75	93.923	ENSHBUG00000008369	snrpb	69	96.429	Haplochromis_burtoni
ENSGAGG00000001308	SNRPB	63	86.667	ENSHGLG00000016505	-	72	86.667	Heterocephalus_glaber_female
ENSGAGG00000001308	SNRPB	95	96.507	ENSHGLG00000016241	-	99	96.507	Heterocephalus_glaber_female
ENSGAGG00000001308	SNRPB	100	96.667	ENSHGLG00100012877	-	100	96.667	Heterocephalus_glaber_male
ENSGAGG00000001308	SNRPB	63	86.667	ENSHGLG00100004178	-	72	86.667	Heterocephalus_glaber_male
ENSGAGG00000001308	SNRPB	76	93.443	ENSHCOG00000014888	snrpb	70	96.429	Hippocampus_comes
ENSGAGG00000001308	SNRPB	100	97.083	ENSIPUG00000024569	SNRPB	100	97.083	Ictalurus_punctatus
ENSGAGG00000001308	SNRPB	92	94.570	ENSSTOG00000033664	-	92	94.570	Ictidomys_tridecemlineatus
ENSGAGG00000001308	SNRPB	90	77.315	ENSSTOG00000027821	-	62	95.588	Ictidomys_tridecemlineatus
ENSGAGG00000001308	SNRPB	95	96.507	ENSJJAG00000024170	Snrpb	99	96.507	Jaculus_jaculus
ENSGAGG00000001308	SNRPB	72	95.376	ENSKMAG00000014494	snrpb	68	97.024	Kryptolebias_marmoratus
ENSGAGG00000001308	SNRPB	76	93.443	ENSLBEG00000005678	snrpb	70	96.429	Labrus_bergylta
ENSGAGG00000001308	SNRPB	92	95.475	ENSLACG00000011459	SNRPB	92	95.475	Latimeria_chalumnae
ENSGAGG00000001308	SNRPB	100	97.500	ENSLOCG00000002687	snrpb	100	97.500	Lepisosteus_oculatus
ENSGAGG00000001308	SNRPB	92	92.273	ENSLAFG00000017588	SNRPB	95	92.273	Loxodonta_africana
ENSGAGG00000001308	SNRPB	95	96.507	ENSMFAG00000038756	SNRPB	99	96.507	Macaca_fascicularis
ENSGAGG00000001308	SNRPB	95	96.507	ENSMMUG00000010050	SNRPB	99	96.507	Macaca_mulatta
ENSGAGG00000001308	SNRPB	95	96.507	ENSMNEG00000027954	SNRPB	99	96.507	Macaca_nemestrina
ENSGAGG00000001308	SNRPB	100	96.667	ENSMLEG00000022346	SNRPB	100	96.667	Mandrillus_leucophaeus
ENSGAGG00000001308	SNRPB	75	93.889	ENSMAMG00000009294	snrpb	67	96.407	Mastacembelus_armatus
ENSGAGG00000001308	SNRPB	75	93.923	ENSMZEG00005011856	snrpb	69	96.429	Maylandia_zebra
ENSGAGG00000001308	SNRPB	94	82.222	ENSMICG00000015983	-	87	86.772	Microcebus_murinus
ENSGAGG00000001308	SNRPB	95	96.070	ENSMICG00000016519	SNRPB	99	96.070	Microcebus_murinus
ENSGAGG00000001308	SNRPB	95	96.070	ENSMOCG00000002892	-	99	96.070	Microtus_ochrogaster
ENSGAGG00000001308	SNRPB	73	76.000	ENSMOCG00000021362	-	73	70.857	Microtus_ochrogaster
ENSGAGG00000001308	SNRPB	76	93.407	ENSMMOG00000013226	snrpb	71	96.407	Mola_mola
ENSGAGG00000001308	SNRPB	75	93.370	ENSMALG00000020839	snrpb	56	95.833	Monopterus_albus
ENSGAGG00000001308	SNRPB	95	96.507	MGP_CAROLIEiJ_G0024293	Snrpb	99	96.507	Mus_caroli
ENSGAGG00000001308	SNRPB	95	96.507	ENSMUSG00000027404	Snrpb	99	96.507	Mus_musculus
ENSGAGG00000001308	SNRPB	95	96.507	MGP_PahariEiJ_G0025738	Snrpb	99	96.507	Mus_pahari
ENSGAGG00000001308	SNRPB	95	96.507	MGP_SPRETEiJ_G0025213	Snrpb	99	96.507	Mus_spretus
ENSGAGG00000001308	SNRPB	95	96.507	ENSMPUG00000009283	SNRPB	99	96.507	Mustela_putorius_furo
ENSGAGG00000001308	SNRPB	92	93.213	ENSMLUG00000016951	SNRPB	92	93.213	Myotis_lucifugus
ENSGAGG00000001308	SNRPB	95	96.507	ENSNGAG00000012051	Snrpb	99	96.507	Nannospalax_galili
ENSGAGG00000001308	SNRPB	75	91.160	ENSNBRG00000006353	snrpb	62	95.122	Neolamprologus_brichardi
ENSGAGG00000001308	SNRPB	100	96.667	ENSNLEG00000029067	SNRPB	100	96.667	Nomascus_leucogenys
ENSGAGG00000001308	SNRPB	94	96.444	ENSMEUG00000015625	SNRPB	100	96.444	Notamacropus_eugenii
ENSGAGG00000001308	SNRPB	99	93.305	ENSODEG00000004305	-	99	96.507	Octodon_degus
ENSGAGG00000001308	SNRPB	79	92.063	ENSODEG00000016060	-	79	93.122	Octodon_degus
ENSGAGG00000001308	SNRPB	75	93.923	ENSONIG00000000248	snrpb	69	96.429	Oreochromis_niloticus
ENSGAGG00000001308	SNRPB	90	91.163	ENSOCUG00000021456	-	78	92.593	Oryctolagus_cuniculus
ENSGAGG00000001308	SNRPB	89	69.014	ENSOCUG00000026813	-	63	67.568	Oryctolagus_cuniculus
ENSGAGG00000001308	SNRPB	75	89.944	ENSOCUG00000022423	-	86	93.452	Oryctolagus_cuniculus
ENSGAGG00000001308	SNRPB	100	96.250	ENSOCUG00000014042	-	100	96.250	Oryctolagus_cuniculus
ENSGAGG00000001308	SNRPB	75	93.370	ENSORLG00000021862	snrpb	69	96.429	Oryzias_latipes
ENSGAGG00000001308	SNRPB	100	96.667	ENSOGAG00000016149	SNRPB	100	96.667	Otolemur_garnettii
ENSGAGG00000001308	SNRPB	95	96.070	ENSOARG00000006740	SNRPB	99	96.070	Ovis_aries
ENSGAGG00000001308	SNRPB	95	96.507	ENSPPAG00000036314	SNRPB	99	96.507	Pan_paniscus
ENSGAGG00000001308	SNRPB	100	96.667	ENSPPRG00000003233	-	100	96.667	Panthera_pardus
ENSGAGG00000001308	SNRPB	99	96.653	ENSPTIG00000007468	SNRPB	99	96.653	Panthera_tigris_altaica
ENSGAGG00000001308	SNRPB	95	96.507	ENSPTRG00000013176	SNRPB	99	96.507	Pan_troglodytes
ENSGAGG00000001308	SNRPB	100	96.667	ENSPANG00000020362	SNRPB	100	96.667	Papio_anubis
ENSGAGG00000001308	SNRPB	100	96.250	ENSPKIG00000002865	snrpb	100	96.250	Paramormyrops_kingsleyae
ENSGAGG00000001308	SNRPB	99	100.000	ENSPSIG00000014125	SNRPB	98	100.000	Pelodiscus_sinensis
ENSGAGG00000001308	SNRPB	74	91.573	ENSPMGG00000016349	snrpb	69	93.865	Periophthalmus_magnuspinnatus
ENSGAGG00000001308	SNRPB	95	96.507	ENSPEMG00000007948	Snrpb	99	96.507	Peromyscus_maniculatus_bairdii
ENSGAGG00000001308	SNRPB	99	96.653	ENSPCIG00000004694	SNRPB	99	96.653	Phascolarctos_cinereus
ENSGAGG00000001308	SNRPB	95	96.507	ENSPPYG00000010841	SNRPB	99	96.507	Pongo_abelii
ENSGAGG00000001308	SNRPB	95	96.507	ENSPCOG00000013686	SNRPB	99	96.507	Propithecus_coquereli
ENSGAGG00000001308	SNRPB	92	95.475	ENSPVAG00000017013	SNRPB	77	95.475	Pteropus_vampyrus
ENSGAGG00000001308	SNRPB	75	93.923	ENSPNYG00000014788	snrpb	69	96.429	Pundamilia_nyererei
ENSGAGG00000001308	SNRPB	76	93.989	ENSPNAG00000016126	snrpb	70	96.429	Pygocentrus_nattereri
ENSGAGG00000001308	SNRPB	95	96.507	ENSRNOG00000006961	Snrpb	99	96.507	Rattus_norvegicus
ENSGAGG00000001308	SNRPB	100	96.250	ENSRBIG00000040505	SNRPB	100	96.250	Rhinopithecus_bieti
ENSGAGG00000001308	SNRPB	100	96.667	ENSRROG00000036094	SNRPB	100	96.667	Rhinopithecus_roxellana
ENSGAGG00000001308	SNRPB	100	96.667	ENSSBOG00000027310	SNRPB	100	96.667	Saimiri_boliviensis_boliviensis
ENSGAGG00000001308	SNRPB	100	97.500	ENSSHAG00000010394	SNRPB	100	97.500	Sarcophilus_harrisii
ENSGAGG00000001308	SNRPB	70	94.048	ENSSFOG00015002870	snrpb	70	95.238	Scleropages_formosus
ENSGAGG00000001308	SNRPB	99	95.798	ENSSMAG00000006766	snrpb	99	95.798	Scophthalmus_maximus
ENSGAGG00000001308	SNRPB	75	93.923	ENSSDUG00000018539	snrpb	69	96.429	Seriola_dumerili
ENSGAGG00000001308	SNRPB	75	93.923	ENSSLDG00000022391	snrpb	69	96.429	Seriola_lalandi_dorsalis
ENSGAGG00000001308	SNRPB	92	84.545	ENSSARG00000003084	SNRPB	94	84.545	Sorex_araneus
ENSGAGG00000001308	SNRPB	99	100.000	ENSSPUG00000015659	SNRPB	100	100.000	Sphenodon_punctatus
ENSGAGG00000001308	SNRPB	75	93.923	ENSSPAG00000021992	snrpb	69	96.429	Stegastes_partitus
ENSGAGG00000001308	SNRPB	95	76.856	ENSSSCG00000011966	-	77	71.585	Sus_scrofa
ENSGAGG00000001308	SNRPB	95	96.070	ENSSSCG00000040857	-	99	96.070	Sus_scrofa
ENSGAGG00000001308	SNRPB	74	81.921	ENSTGUG00000005684	SNRPB	59	99.286	Taeniopygia_guttata
ENSGAGG00000001308	SNRPB	95	95.633	ENSTRUG00000023094	snrpb	99	95.633	Takifugu_rubripes
ENSGAGG00000001308	SNRPB	99	95.798	ENSTNIG00000002991	snrpb	99	95.798	Tetraodon_nigroviridis
ENSGAGG00000001308	SNRPB	73	96.571	ENSUAMG00000005984	-	84	96.571	Ursus_americanus
ENSGAGG00000001308	SNRPB	57	95.620	ENSUMAG00000002123	-	64	94.245	Ursus_maritimus
ENSGAGG00000001308	SNRPB	100	96.250	ENSVVUG00000025654	-	100	96.250	Vulpes_vulpes
ENSGAGG00000001308	SNRPB	100	73.750	ENSVVUG00000010086	-	85	78.571	Vulpes_vulpes
ENSGAGG00000001308	SNRPB	100	95.833	ENSXETG00000027266	snrpb	100	95.833	Xenopus_tropicalis
ENSGAGG00000001308	SNRPB	71	80.702	ENSXMAG00000028767	snrpb	58	97.778	Xiphophorus_maculatus