EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000001563 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 11678 bases
Position: chrPPEB01005645.1:101761-113438
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000001941	PRP38	PF03371.15	1.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000002208	-	2772	-	ENSGAGP00000001941	545 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000001563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000001563's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000001563	-	100	87.020	ENSBTAG00000047874	PRPF38B	100	86.909	Bos_taurus
ENSGAGG00000001563	-	100	71.273	ENSCAFG00020010992	-	100	75.271	Canis_lupus_dingo
ENSGAGG00000001563	-	100	87.020	ENSCHIG00000024357	-	100	86.909	Capra_hircus
ENSGAGG00000001563	-	79	86.543	ENSCAPG00000009606	-	98	87.290	Cavia_aperea
ENSGAGG00000001563	-	100	85.688	ENSCPOG00000039545	-	100	85.428	Cavia_porcellus
ENSGAGG00000001563	-	100	85.818	ENSCLAG00000005801	-	100	85.740	Chinchilla_lanigera
ENSGAGG00000001563	-	64	78.470	ENSCHOG00000008972	-	100	75.921	Choloepus_hoffmanni
ENSGAGG00000001563	-	100	97.982	ENSCPBG00000028299	-	100	97.982	Chrysemys_picta_bellii
ENSGAGG00000001563	-	82	83.664	ENSETEG00000014690	-	100	84.581	Echinops_telfairi
ENSGAGG00000001563	-	83	89.011	ENSFALG00000002673	-	89	90.330	Ficedula_albicollis
ENSGAGG00000001563	-	100	92.532	ENSGALG00000001972	-	100	92.532	Gallus_gallus
ENSGAGG00000001563	-	83	63.482	ENSGAFG00000008943	-	99	62.648	Gambusia_affinis
ENSGAGG00000001563	-	100	87.067	ENSHGLG00000016583	PRPF38B	100	87.067	Heterocephalus_glaber_female
ENSGAGG00000001563	-	100	86.885	ENSHGLG00100015525	-	100	86.885	Heterocephalus_glaber_male
ENSGAGG00000001563	-	83	62.947	ENSHCOG00000001071	-	99	65.605	Hippocampus_comes
ENSGAGG00000001563	-	83	60.950	ENSKMAG00000005540	-	99	61.176	Kryptolebias_marmoratus
ENSGAGG00000001563	-	99	72.261	ENSLACG00000015511	-	96	76.504	Latimeria_chalumnae
ENSGAGG00000001563	-	60	90.274	ENSMOCG00000020285	-	100	85.897	Microtus_ochrogaster
ENSGAGG00000001563	-	56	94.788	ENSMODG00000002350	-	100	87.751	Monodelphis_domestica
ENSGAGG00000001563	-	83	64.182	ENSMALG00000019479	-	99	61.886	Monopterus_albus
ENSGAGG00000001563	-	80	86.523	ENSOPRG00000013543	-	81	86.792	Ochotona_princeps
ENSGAGG00000001563	-	83	64.927	ENSONIG00000010129	-	97	63.473	Oreochromis_niloticus
ENSGAGG00000001563	-	94	74.943	ENSOANG00000007343	-	99	66.239	Ornithorhynchus_anatinus
ENSGAGG00000001563	-	83	64.632	ENSORLG00000015621	-	91	89.375	Oryzias_latipes
ENSGAGG00000001563	-	83	66.381	ENSORLG00020016276	-	91	89.375	Oryzias_latipes_hni
ENSGAGG00000001563	-	83	66.167	ENSORLG00015016270	-	77	89.375	Oryzias_latipes_hsok
ENSGAGG00000001563	-	83	65.263	ENSOMEG00000022050	-	94	88.889	Oryzias_melastigma
ENSGAGG00000001563	-	100	85.428	ENSOGAG00000027048	-	100	85.610	Otolemur_garnettii
ENSGAGG00000001563	-	100	85.558	ENSOARG00000018899	-	100	86.106	Ovis_aries
ENSGAGG00000001563	-	94	63.619	ENSPKIG00000004815	-	97	63.916	Paramormyrops_kingsleyae
ENSGAGG00000001563	-	99	62.118	ENSPKIG00000017291	-	81	92.823	Paramormyrops_kingsleyae
ENSGAGG00000001563	-	100	95.596	ENSPSIG00000016569	-	100	95.596	Pelodiscus_sinensis
ENSGAGG00000001563	-	83	64.331	ENSPFOG00000004025	-	84	90.000	Poecilia_formosa
ENSGAGG00000001563	-	83	64.544	ENSPLAG00000019842	-	99	63.241	Poecilia_latipinna
ENSGAGG00000001563	-	83	64.119	ENSPMEG00000004807	-	96	62.846	Poecilia_mexicana
ENSGAGG00000001563	-	83	63.482	ENSPREG00000015599	-	86	90.000	Poecilia_reticulata
ENSGAGG00000001563	-	100	83.607	ENSRNOG00000020438	Prpf38b	100	85.428	Rattus_norvegicus
ENSGAGG00000001563	-	93	62.590	ENSSFOG00015011251	-	79	97.351	Scleropages_formosus
ENSGAGG00000001563	-	83	64.948	ENSSLDG00000023487	-	86	90.000	Seriola_lalandi_dorsalis
ENSGAGG00000001563	-	100	89.818	ENSSPUG00000017742	-	100	90.545	Sphenodon_punctatus
ENSGAGG00000001563	-	77	62.446	ENSTRUG00000011765	-	99	60.672	Takifugu_rubripes
ENSGAGG00000001563	-	50	81.495	ENSTNIG00000015299	-	55	85.973	Tetraodon_nigroviridis
ENSGAGG00000001563	-	93	84.932	ENSTBEG00000007504	-	100	85.127	Tupaia_belangeri
ENSGAGG00000001563	-	100	87.203	ENSTTRG00000006479	-	100	87.091	Tursiops_truncatus
ENSGAGG00000001563	-	93	82.840	ENSVPAG00000005541	-	94	83.203	Vicugna_pacos
ENSGAGG00000001563	-	88	77.413	ENSXETG00000005260	prpf38b	96	70.690	Xenopus_tropicalis
ENSGAGG00000001563	-	83	64.271	ENSXCOG00000008329	-	99	62.648	Xiphophorus_couchianus
ENSGAGG00000001563	-	83	64.271	ENSXMAG00000023831	-	99	62.648	Xiphophorus_maculatus