EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000001590 (Gene tree)
Gene ID: -
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 50073 bases
Position: chrPPEB01002858.1:2856-52928
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000004724	ResIII	PF04851.15	1.2e-08	1	1
ENSGAGP00000005366	ResIII	PF04851.15	2e-08	1	1
ENSGAGP00000005356	ResIII	PF04851.15	2.9e-08	1	1
ENSGAGP00000005236	ResIII	PF04851.15	3.3e-08	1	1
ENSGAGP00000004962	ResIII	PF04851.15	3.7e-08	1	1
ENSGAGP00000004672	ResIII	PF04851.15	4e-08	1	1
ENSGAGP00000004770	ResIII	PF04851.15	4.1e-08	1	1
ENSGAGP00000004899	ResIII	PF04851.15	4.1e-08	1	1
ENSGAGP00000004896	ResIII	PF04851.15	4.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000005585	CHD5-203	5472	-	ENSGAGP00000004770	1823 (aa)	-	-
ENSGAGT00000005469	CHD5-201	5373	-	ENSGAGP00000004672	1790 (aa)	-	-
ENSGAGT00000006098	CHD5-207	4911	-	ENSGAGP00000005236	1636 (aa)	-	-
ENSGAGT00000006236	CHD5-208	4854	-	ENSGAGP00000005356	1617 (aa)	-	-
ENSGAGT00000005798	CHD5-206	5037	-	ENSGAGP00000004962	1678 (aa)	-	-
ENSGAGT00000005534	CHD5-202	5058	-	ENSGAGP00000004724	1685 (aa)	-	-
ENSGAGT00000005724	CHD5-205	5499	-	ENSGAGP00000004899	1832 (aa)	-	-
ENSGAGT00000005721	CHD5-204	5517	-	ENSGAGP00000004896	1838 (aa)	-	-
ENSGAGT00000006247	CHD5-209	3639	-	ENSGAGP00000005366	1212 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000001590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000001590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000001590	CHD5	82	77.976	ENSGAGG00000013164	CHD3	93	83.333
ENSGAGG00000001590	CHD5	99	82.000	ENSGAGG00000001416	-	84	83.333
ENSGAGG00000001590	CHD5	62	41.818	ENSGAGG00000013176	-	87	41.379

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000001590	CHD5	99	95.122	ENSG00000116254	CHD5	96	90.874	Homo_sapiens
ENSGAGG00000001590	CHD5	99	96.098	ENSAMEG00000009880	CHD5	97	87.467	Ailuropoda_melanoleuca
ENSGAGG00000001590	CHD5	97	90.547	ENSACIG00000012582	chd5	88	90.610	Amphilophus_citrinellus
ENSGAGG00000001590	CHD5	86	89.756	ENSAOCG00000020356	chd5	80	89.756	Amphiprion_ocellaris
ENSGAGG00000001590	CHD5	99	95.455	ENSAPLG00000015475	CHD5	92	94.466	Anas_platyrhynchos
ENSGAGG00000001590	CHD5	99	94.421	ENSACAG00000002441	CHD5	90	92.771	Anolis_carolinensis
ENSGAGG00000001590	CHD5	91	95.333	ENSANAG00000001078	CHD5	84	97.279	Aotus_nancymaae
ENSGAGG00000001590	CHD5	97	73.811	ENSACLG00000003012	chd5	97	73.730	Astatotilapia_calliptera
ENSGAGG00000001590	CHD5	94	90.000	ENSAMXG00000008921	chd5	97	91.163	Astyanax_mexicanus
ENSGAGG00000001590	CHD5	97	95.146	ENSBTAG00000040477	CHD5	100	88.000	Bos_taurus
ENSGAGG00000001590	CHD5	99	95.610	ENSCJAG00000000101	CHD5	96	87.633	Callithrix_jacchus
ENSGAGG00000001590	CHD5	96	95.610	ENSCAFG00000019545	CHD5	100	88.103	Canis_familiaris
ENSGAGG00000001590	CHD5	99	95.610	ENSCAFG00020008689	CHD5	93	87.940	Canis_lupus_dingo
ENSGAGG00000001590	CHD5	99	95.652	ENSCHIG00000015027	CHD5	89	95.652	Capra_hircus
ENSGAGG00000001590	CHD5	99	96.098	ENSTSYG00000033991	CHD5	88	95.169	Carlito_syrichta
ENSGAGG00000001590	CHD5	99	96.098	ENSCAPG00000009294	CHD5	97	87.620	Cavia_aperea
ENSGAGG00000001590	CHD5	99	96.098	ENSCPOG00000025080	CHD5	97	87.673	Cavia_porcellus
ENSGAGG00000001590	CHD5	99	95.610	ENSCCAG00000024756	CHD5	96	88.377	Cebus_capucinus
ENSGAGG00000001590	CHD5	99	95.610	ENSCATG00000043011	CHD5	96	87.154	Cercocebus_atys
ENSGAGG00000001590	CHD5	99	95.610	ENSCLAG00000010589	CHD5	96	87.673	Chinchilla_lanigera
ENSGAGG00000001590	CHD5	99	95.610	ENSCSAG00000000733	CHD5	96	88.006	Chlorocebus_sabaeus
ENSGAGG00000001590	CHD5	97	100.000	ENSCPBG00000019363	CHD5	100	94.237	Chrysemys_picta_bellii
ENSGAGG00000001590	CHD5	99	95.610	ENSCANG00000032302	CHD5	96	87.846	Colobus_angolensis_palliatus
ENSGAGG00000001590	CHD5	84	88.889	ENSCGRG00001011042	Chd5	98	89.176	Cricetulus_griseus_chok1gshd
ENSGAGG00000001590	CHD5	99	95.122	ENSCGRG00000011341	Chd5	89	96.020	Cricetulus_griseus_crigri
ENSGAGG00000001590	CHD5	97	92.000	ENSDARG00000105083	chd5	91	85.714	Danio_rerio
ENSGAGG00000001590	CHD5	99	78.261	ENSDARG00000025789	chd4b	85	80.930	Danio_rerio
ENSGAGG00000001590	CHD5	93	96.923	ENSDNOG00000046342	CHD5	89	92.032	Dasypus_novemcinctus
ENSGAGG00000001590	CHD5	99	95.122	ENSDORG00000005923	Chd5	97	87.301	Dipodomys_ordii
ENSGAGG00000001590	CHD5	99	97.525	ENSEASG00005021464	CHD5	93	97.525	Equus_asinus_asinus
ENSGAGG00000001590	CHD5	99	97.525	ENSECAG00000025043	CHD5	98	93.200	Equus_caballus
ENSGAGG00000001590	CHD5	79	97.143	ENSEEUG00000002772	CHD5	72	95.814	Erinaceus_europaeus
ENSGAGG00000001590	CHD5	97	90.777	ENSELUG00000010742	chd5	90	91.667	Esox_lucius
ENSGAGG00000001590	CHD5	99	95.610	ENSFCAG00000006319	CHD5	96	87.846	Felis_catus
ENSGAGG00000001590	CHD5	99	95.098	ENSFALG00000009740	CHD5	96	88.765	Ficedula_albicollis
ENSGAGG00000001590	CHD5	99	95.610	ENSFDAG00000012881	CHD5	87	96.517	Fukomys_damarensis
ENSGAGG00000001590	CHD5	97	95.021	ENSGALG00000000747	CHD5	96	89.269	Gallus_gallus
ENSGAGG00000001590	CHD5	72	85.567	ENSGACG00000004389	chd5	93	80.165	Gasterosteus_aculeatus
ENSGAGG00000001590	CHD5	99	95.122	ENSGGOG00000000708	CHD5	97	87.900	Gorilla_gorilla
ENSGAGG00000001590	CHD5	85	90.547	ENSHBUG00000013453	chd5	88	90.547	Haplochromis_burtoni
ENSGAGG00000001590	CHD5	99	95.610	ENSHGLG00000018184	CHD5	99	87.567	Heterocephalus_glaber_female
ENSGAGG00000001590	CHD5	99	95.610	ENSHGLG00100013261	CHD5	86	96.517	Heterocephalus_glaber_male
ENSGAGG00000001590	CHD5	96	90.816	ENSIPUG00000005446	chd5	90	89.767	Ictalurus_punctatus
ENSGAGG00000001590	CHD5	99	95.610	ENSSTOG00000002778	CHD5	90	96.517	Ictidomys_tridecemlineatus
ENSGAGG00000001590	CHD5	99	95.122	ENSJJAG00000019072	Chd5	96	87.286	Jaculus_jaculus
ENSGAGG00000001590	CHD5	59	90.299	ENSLACG00000022233	-	99	89.099	Latimeria_chalumnae
ENSGAGG00000001590	CHD5	99	94.500	ENSLOCG00000004944	chd5	87	94.860	Lepisosteus_oculatus
ENSGAGG00000001590	CHD5	99	95.610	ENSLAFG00000006348	CHD5	91	95.610	Loxodonta_africana
ENSGAGG00000001590	CHD5	99	95.122	ENSMFAG00000033993	CHD5	100	87.993	Macaca_fascicularis
ENSGAGG00000001590	CHD5	99	95.122	ENSMMUG00000016838	CHD5	88	96.020	Macaca_mulatta
ENSGAGG00000001590	CHD5	99	95.610	ENSMNEG00000040044	CHD5	96	87.953	Macaca_nemestrina
ENSGAGG00000001590	CHD5	99	89.315	ENSMLEG00000039166	CHD5	97	84.700	Mandrillus_leucophaeus
ENSGAGG00000001590	CHD5	86	85.099	ENSMZEG00005000841	chd5	91	78.639	Maylandia_zebra
ENSGAGG00000001590	CHD5	99	94.634	ENSMGAG00000001055	CHD5	96	89.107	Meleagris_gallopavo
ENSGAGG00000001590	CHD5	99	95.610	ENSMICG00000017862	CHD5	95	93.080	Microcebus_murinus
ENSGAGG00000001590	CHD5	99	95.122	ENSMOCG00000011049	Chd5	88	96.020	Microtus_ochrogaster
ENSGAGG00000001590	CHD5	82	89.827	ENSMODG00000006294	CHD5	72	92.841	Monodelphis_domestica
ENSGAGG00000001590	CHD5	97	89.756	ENSMALG00000002831	chd5	85	91.549	Monopterus_albus
ENSGAGG00000001590	CHD5	99	95.122	MGP_CAROLIEiJ_G0026857	Chd5	96	87.500	Mus_caroli
ENSGAGG00000001590	CHD5	99	95.122	ENSMUSG00000005045	Chd5	96	87.093	Mus_musculus
ENSGAGG00000001590	CHD5	99	95.122	MGP_PahariEiJ_G0029205	Chd5	96	87.179	Mus_pahari
ENSGAGG00000001590	CHD5	99	95.122	MGP_SPRETEiJ_G0027850	Chd5	96	87.393	Mus_spretus
ENSGAGG00000001590	CHD5	99	95.122	ENSMPUG00000007122	CHD5	92	92.734	Mustela_putorius_furo
ENSGAGG00000001590	CHD5	99	94.634	ENSNGAG00000019812	Chd5	93	86.891	Nannospalax_galili
ENSGAGG00000001590	CHD5	97	96.341	ENSNLEG00000010320	CHD5	87	96.341	Nomascus_leucogenys
ENSGAGG00000001590	CHD5	86	96.000	ENSOPRG00000004304	CHD5	76	96.000	Ochotona_princeps
ENSGAGG00000001590	CHD5	99	95.652	ENSODEG00000010262	CHD5	97	87.387	Octodon_degus
ENSGAGG00000001590	CHD5	93	89.756	ENSONIG00000000619	chd5	84	91.549	Oreochromis_niloticus
ENSGAGG00000001590	CHD5	99	96.117	ENSOANG00000001819	CHD5	88	96.789	Ornithorhynchus_anatinus
ENSGAGG00000001590	CHD5	98	95.610	ENSOGAG00000005703	CHD5	94	87.357	Otolemur_garnettii
ENSGAGG00000001590	CHD5	99	95.146	ENSOARG00000013425	CHD5	87	96.517	Ovis_aries
ENSGAGG00000001590	CHD5	99	95.122	ENSPPAG00000034048	CHD5	97	87.853	Pan_paniscus
ENSGAGG00000001590	CHD5	99	95.610	ENSPPRG00000009453	CHD5	96	87.207	Panthera_pardus
ENSGAGG00000001590	CHD5	88	96.622	ENSPTIG00000013926	CHD5	97	81.583	Panthera_tigris_altaica
ENSGAGG00000001590	CHD5	99	95.122	ENSPTRG00000000075	CHD5	96	87.853	Pan_troglodytes
ENSGAGG00000001590	CHD5	99	95.610	ENSPANG00000006765	CHD5	96	88.060	Papio_anubis
ENSGAGG00000001590	CHD5	97	90.338	ENSPKIG00000004282	chd5	90	92.093	Paramormyrops_kingsleyae
ENSGAGG00000001590	CHD5	99	88.102	ENSPSIG00000006414	CHD5	95	89.283	Pelodiscus_sinensis
ENSGAGG00000001590	CHD5	96	90.281	ENSPEMG00000014799	Chd5	96	90.739	Peromyscus_maniculatus_bairdii
ENSGAGG00000001590	CHD5	99	96.098	ENSPCIG00000028310	CHD5	87	97.297	Phascolarctos_cinereus
ENSGAGG00000001590	CHD5	82	100.000	ENSPLAG00000005343	chd5	92	85.417	Poecilia_latipinna
ENSGAGG00000001590	CHD5	99	95.122	ENSPPYG00000001952	CHD5	91	95.122	Pongo_abelii
ENSGAGG00000001590	CHD5	99	95.610	ENSPCOG00000022930	CHD5	95	89.303	Propithecus_coquereli
ENSGAGG00000001590	CHD5	98	84.167	ENSPNYG00000003183	chd5	87	92.344	Pundamilia_nyererei
ENSGAGG00000001590	CHD5	99	94.634	ENSRNOG00000011268	Chd5	97	87.400	Rattus_norvegicus
ENSGAGG00000001590	CHD5	99	95.610	ENSRBIG00000032140	CHD5	96	89.808	Rhinopithecus_bieti
ENSGAGG00000001590	CHD5	99	95.610	ENSRROG00000041146	CHD5	96	87.793	Rhinopithecus_roxellana
ENSGAGG00000001590	CHD5	99	95.610	ENSSBOG00000001955	CHD5	98	89.049	Saimiri_boliviensis_boliviensis
ENSGAGG00000001590	CHD5	99	85.542	ENSSHAG00000018641	CHD5	99	82.810	Sarcophilus_harrisii
ENSGAGG00000001590	CHD5	96	92.000	ENSSFOG00015006296	chd5	88	92.130	Scleropages_formosus
ENSGAGG00000001590	CHD5	97	89.855	ENSSDUG00000017526	chd5	92	91.549	Seriola_dumerili
ENSGAGG00000001590	CHD5	99	97.095	ENSSPUG00000010622	CHD5	88	97.073	Sphenodon_punctatus
ENSGAGG00000001590	CHD5	99	95.146	ENSSSCG00000003366	CHD5	100	88.022	Sus_scrofa
ENSGAGG00000001590	CHD5	99	93.506	ENSTGUG00000002634	-	91	95.918	Taeniopygia_guttata
ENSGAGG00000001590	CHD5	82	78.627	ENSTNIG00000004346	chd5	99	79.212	Tetraodon_nigroviridis
ENSGAGG00000001590	CHD5	99	95.122	ENSTTRG00000010468	CHD5	87	95.122	Tursiops_truncatus
ENSGAGG00000001590	CHD5	99	96.117	ENSUAMG00000024509	CHD5	95	93.868	Ursus_americanus
ENSGAGG00000001590	CHD5	98	96.703	ENSUMAG00000024173	CHD5	88	98.324	Ursus_maritimus
ENSGAGG00000001590	CHD5	99	95.631	ENSVVUG00000026480	CHD5	95	95.631	Vulpes_vulpes
ENSGAGG00000001590	CHD5	99	96.078	ENSXETG00000002904	chd5	91	96.078	Xenopus_tropicalis
ENSGAGG00000001590	CHD5	86	79.061	ENSXCOG00000014202	chd5	95	83.871	Xiphophorus_couchianus