EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000001645 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 13010 bases
Position: chrPPEB01011609.1:15674-28683
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000002046	zf-C2H2	PF00096.26	1.1e-53	1	10
ENSGAGP00000002046	zf-C2H2	PF00096.26	1.1e-53	2	10
ENSGAGP00000002046	zf-C2H2	PF00096.26	1.1e-53	3	10
ENSGAGP00000002046	zf-C2H2	PF00096.26	1.1e-53	4	10
ENSGAGP00000002046	zf-C2H2	PF00096.26	1.1e-53	5	10
ENSGAGP00000002046	zf-C2H2	PF00096.26	1.1e-53	6	10
ENSGAGP00000002046	zf-C2H2	PF00096.26	1.1e-53	7	10
ENSGAGP00000002046	zf-C2H2	PF00096.26	1.1e-53	8	10
ENSGAGP00000002046	zf-C2H2	PF00096.26	1.1e-53	9	10
ENSGAGP00000002046	zf-C2H2	PF00096.26	1.1e-53	10	10
ENSGAGP00000002042	zf-C2H2	PF00096.26	2.9e-15	1	3
ENSGAGP00000002042	zf-C2H2	PF00096.26	2.9e-15	2	3
ENSGAGP00000002042	zf-C2H2	PF00096.26	2.9e-15	3	3
ENSGAGP00000002046	zf-met	PF12874.7	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000002320	-	807	-	ENSGAGP00000002042	268 (aa)	-	-
ENSGAGT00000002329	-	1521	-	ENSGAGP00000002046	506 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000001645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000001645's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000001645	-	89	65.517	ENSGAGG00000012452	-	93	49.746
ENSGAGG00000001645	-	81	57.692	ENSGAGG00000015451	-	97	58.416
ENSGAGG00000001645	-	63	71.257	ENSGAGG00000006683	-	89	71.257
ENSGAGG00000001645	-	52	46.739	ENSGAGG00000015899	GFI1	99	48.507
ENSGAGG00000001645	-	81	32.680	ENSGAGG00000022571	ZNF319	93	40.397
ENSGAGG00000001645	-	63	58.511	ENSGAGG00000006848	-	54	57.812
ENSGAGG00000001645	-	74	50.980	ENSGAGG00000006846	-	96	51.379
ENSGAGG00000001645	-	92	65.900	ENSGAGG00000014356	-	89	88.889
ENSGAGG00000001645	-	73	62.500	ENSGAGG00000016529	-	88	62.500
ENSGAGG00000001645	-	69	66.426	ENSGAGG00000014389	-	99	66.667
ENSGAGG00000001645	-	60	60.169	ENSGAGG00000005805	-	94	57.000
ENSGAGG00000001645	-	63	65.829	ENSGAGG00000000971	-	92	65.829
ENSGAGG00000001645	-	64	58.871	ENSGAGG00000018445	-	83	58.871
ENSGAGG00000001645	-	92	60.596	ENSGAGG00000019349	-	99	60.596
ENSGAGG00000001645	-	66	57.391	ENSGAGG00000011574	-	88	57.391
ENSGAGG00000001645	-	92	65.472	ENSGAGG00000008773	-	98	58.594
ENSGAGG00000001645	-	64	37.247	ENSGAGG00000020362	PRDM5	69	37.255
ENSGAGG00000001645	-	63	63.492	ENSGAGG00000010492	-	84	63.492
ENSGAGG00000001645	-	92	57.419	ENSGAGG00000020134	-	96	61.905
ENSGAGG00000001645	-	73	60.766	ENSGAGG00000004740	-	90	67.416
ENSGAGG00000001645	-	79	43.243	ENSGAGG00000003095	ZNF865	80	42.400
ENSGAGG00000001645	-	63	50.916	ENSGAGG00000018885	-	66	50.916
ENSGAGG00000001645	-	92	58.519	ENSGAGG00000002179	-	89	76.087
ENSGAGG00000001645	-	68	67.188	ENSGAGG00000017986	-	99	64.062
ENSGAGG00000001645	-	73	46.581	ENSGAGG00000005331	-	91	46.581
ENSGAGG00000001645	-	69	60.185	ENSGAGG00000001469	-	93	60.092
ENSGAGG00000001645	-	64	57.627	ENSGAGG00000013851	-	86	55.670
ENSGAGG00000001645	-	64	59.396	ENSGAGG00000002828	-	67	59.396
ENSGAGG00000001645	-	67	68.127	ENSGAGG00000009739	-	99	68.127
ENSGAGG00000001645	-	69	86.364	ENSGAGG00000010324	-	93	60.920
ENSGAGG00000001645	-	73	87.805	ENSGAGG00000009272	-	92	82.979
ENSGAGG00000001645	-	62	57.091	ENSGAGG00000001387	-	59	57.091
ENSGAGG00000001645	-	62	54.088	ENSGAGG00000004926	-	95	54.088
ENSGAGG00000001645	-	63	61.585	ENSGAGG00000015232	-	69	61.585
ENSGAGG00000001645	-	66	56.219	ENSGAGG00000020168	-	75	56.219
ENSGAGG00000001645	-	67	66.810	ENSGAGG00000007230	-	89	66.810
ENSGAGG00000001645	-	69	53.689	ENSGAGG00000011399	-	84	54.310
ENSGAGG00000001645	-	91	64.754	ENSGAGG00000006960	-	98	58.842
ENSGAGG00000001645	-	60	32.129	ENSGAGG00000022082	PRDM15	50	30.588
ENSGAGG00000001645	-	64	49.057	ENSGAGG00000017640	-	56	53.623
ENSGAGG00000001645	-	91	60.662	ENSGAGG00000011487	-	99	60.662
ENSGAGG00000001645	-	68	54.035	ENSGAGG00000011366	-	92	54.035
ENSGAGG00000001645	-	82	59.000	ENSGAGG00000006323	-	90	63.177
ENSGAGG00000001645	-	66	44.482	ENSGAGG00000017094	-	51	44.840
ENSGAGG00000001645	-	93	65.700	ENSGAGG00000010833	-	83	86.957
ENSGAGG00000001645	-	63	51.807	ENSGAGG00000013021	-	96	51.807
ENSGAGG00000001645	-	73	88.889	ENSGAGG00000020594	-	73	88.889
ENSGAGG00000001645	-	93	63.347	ENSGAGG00000002214	-	99	63.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000001645	-	61	60.784	ENSAMXG00000029161	-	81	60.784	Astyanax_mexicanus
ENSGAGG00000001645	-	91	62.598	ENSCPBG00000004990	-	99	63.454	Chrysemys_picta_bellii
ENSGAGG00000001645	-	92	64.655	ENSCPBG00000012976	-	99	61.981	Chrysemys_picta_bellii
ENSGAGG00000001645	-	91	55.515	ENSCPBG00000021487	-	93	55.882	Chrysemys_picta_bellii
ENSGAGG00000001645	-	98	64.935	ENSCPBG00000004030	-	99	64.935	Chrysemys_picta_bellii
ENSGAGG00000001645	-	92	63.525	ENSCPBG00000016841	-	95	82.051	Chrysemys_picta_bellii
ENSGAGG00000001645	-	91	64.130	ENSCPBG00000001272	-	98	61.258	Chrysemys_picta_bellii
ENSGAGG00000001645	-	76	63.063	ENSCPBG00000001421	-	98	61.468	Chrysemys_picta_bellii
ENSGAGG00000001645	-	92	60.377	ENSCPBG00000021479	-	99	60.377	Chrysemys_picta_bellii
ENSGAGG00000001645	-	64	51.875	ENSPSIG00000001026	-	89	53.952	Pelodiscus_sinensis
ENSGAGG00000001645	-	63	64.205	ENSPSIG00000002569	-	77	64.205	Pelodiscus_sinensis
ENSGAGG00000001645	-	63	56.395	ENSPSIG00000000522	-	91	56.195	Pelodiscus_sinensis
ENSGAGG00000001645	-	92	53.395	ENSPSIG00000015465	-	98	53.395	Pelodiscus_sinensis
ENSGAGG00000001645	-	63	62.338	ENSPSIG00000015216	-	90	54.867	Pelodiscus_sinensis
ENSGAGG00000001645	-	94	56.013	ENSPSIG00000012865	-	99	56.190	Pelodiscus_sinensis
ENSGAGG00000001645	-	91	53.797	ENSPSIG00000009893	-	100	58.228	Pelodiscus_sinensis
ENSGAGG00000001645	-	62	61.905	ENSTGUG00000018542	-	100	61.905	Taeniopygia_guttata
ENSGAGG00000001645	-	63	57.812	ENSTGUG00000016850	-	100	57.812	Taeniopygia_guttata
ENSGAGG00000001645	-	63	59.000	ENSTGUG00000013736	-	100	59.000	Taeniopygia_guttata
ENSGAGG00000001645	-	62	53.439	ENSTGUG00000015260	-	100	53.535	Taeniopygia_guttata
ENSGAGG00000001645	-	63	58.678	ENSTGUG00000016516	-	100	58.678	Taeniopygia_guttata
ENSGAGG00000001645	-	63	56.506	ENSTGUG00000016781	-	100	56.506	Taeniopygia_guttata
ENSGAGG00000001645	-	63	58.000	ENSTGUG00000014614	-	100	58.000	Taeniopygia_guttata
ENSGAGG00000001645	-	62	63.333	ENSTGUG00000018327	-	100	63.830	Taeniopygia_guttata
ENSGAGG00000001645	-	60	57.812	ENSTGUG00000018518	-	100	57.812	Taeniopygia_guttata
ENSGAGG00000001645	-	62	57.325	ENSTGUG00000018374	-	99	57.325	Taeniopygia_guttata
ENSGAGG00000001645	-	63	59.278	ENSTGUG00000018445	-	93	59.278	Taeniopygia_guttata
ENSGAGG00000001645	-	62	64.815	ENSTGUG00000018349	-	100	64.815	Taeniopygia_guttata
ENSGAGG00000001645	-	63	55.814	ENSTGUG00000014888	-	99	55.814	Taeniopygia_guttata