EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000001659 (Gene tree)
Gene ID: -
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 26117 bases
Position: chrPPEB01006294.1:29351-55467
Accession: 17631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000002109	RNA_pol_I_A49	PF06870.12	2.1e-81	1	2
ENSGAGP00000002109	RNA_pol_I_A49	PF06870.12	2.1e-81	2	2
ENSGAGP00000002113	RNA_pol_I_A49	PF06870.12	2.9e-78	1	3
ENSGAGP00000002113	RNA_pol_I_A49	PF06870.12	2.9e-78	2	3
ENSGAGP00000002113	RNA_pol_I_A49	PF06870.12	2.9e-78	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000002403	POLR1E-202	1077	-	ENSGAGP00000002113	358 (aa)	-	-
ENSGAGT00000002399	POLR1E-201	1176	-	ENSGAGP00000002109	391 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000001659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000001659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000001659	POLR1E	98	58.696	ENSG00000137054	POLR1E	98	58.637	Homo_sapiens
ENSGAGG00000001659	POLR1E	99	39.857	ENSAPOG00000012452	polr1e	97	40.098	Acanthochromis_polyacanthus
ENSGAGG00000001659	POLR1E	97	76.344	ENSAMEG00000010193	POLR1E	79	76.344	Ailuropoda_melanoleuca
ENSGAGG00000001659	POLR1E	97	44.772	ENSACIG00000009884	polr1e	99	45.867	Amphilophus_citrinellus
ENSGAGG00000001659	POLR1E	99	43.198	ENSAOCG00000005665	polr1e	97	43.521	Amphiprion_ocellaris
ENSGAGG00000001659	POLR1E	99	43.198	ENSAPEG00000020581	polr1e	97	43.521	Amphiprion_percula
ENSGAGG00000001659	POLR1E	99	43.095	ENSATEG00000020609	polr1e	97	43.415	Anabas_testudineus
ENSGAGG00000001659	POLR1E	81	75.000	ENSAPLG00000010340	POLR1E	84	75.000	Anas_platyrhynchos
ENSGAGG00000001659	POLR1E	98	58.454	ENSANAG00000038046	POLR1E	98	58.637	Aotus_nancymaae
ENSGAGG00000001659	POLR1E	99	42.721	ENSACLG00000013685	polr1e	96	43.032	Astatotilapia_calliptera
ENSGAGG00000001659	POLR1E	98	39.651	ENSAMXG00000018181	polr1e	96	39.109	Astyanax_mexicanus
ENSGAGG00000001659	POLR1E	98	60.870	ENSBTAG00000012243	POLR1E	98	60.827	Bos_taurus
ENSGAGG00000001659	POLR1E	100	53.598	ENSCJAG00000010512	POLR1E	91	58.743	Callithrix_jacchus
ENSGAGG00000001659	POLR1E	98	59.903	ENSCAFG00000002377	POLR1E	98	59.854	Canis_familiaris
ENSGAGG00000001659	POLR1E	98	60.145	ENSCAFG00020017851	POLR1E	98	60.097	Canis_lupus_dingo
ENSGAGG00000001659	POLR1E	98	60.145	ENSCHIG00000019479	POLR1E	98	60.097	Capra_hircus
ENSGAGG00000001659	POLR1E	98	58.454	ENSTSYG00000002075	POLR1E	98	58.394	Carlito_syrichta
ENSGAGG00000001659	POLR1E	74	59.507	ENSCAPG00000015653	POLR1E	98	60.563	Cavia_aperea
ENSGAGG00000001659	POLR1E	98	59.854	ENSCPOG00000009965	POLR1E	98	59.804	Cavia_porcellus
ENSGAGG00000001659	POLR1E	98	57.990	ENSCCAG00000029460	POLR1E	97	58.182	Cebus_capucinus
ENSGAGG00000001659	POLR1E	98	58.454	ENSCATG00000031732	POLR1E	98	58.394	Cercocebus_atys
ENSGAGG00000001659	POLR1E	85	59.945	ENSCLAG00000012701	POLR1E	93	60.112	Chinchilla_lanigera
ENSGAGG00000001659	POLR1E	98	57.971	ENSCSAG00000010782	POLR1E	98	57.908	Chlorocebus_sabaeus
ENSGAGG00000001659	POLR1E	97	55.330	ENSCHOG00000013024	POLR1E	83	56.061	Choloepus_hoffmanni
ENSGAGG00000001659	POLR1E	99	82.324	ENSCPBG00000006923	POLR1E	98	83.047	Chrysemys_picta_bellii
ENSGAGG00000001659	POLR1E	98	58.213	ENSCANG00000036112	POLR1E	98	58.151	Colobus_angolensis_palliatus
ENSGAGG00000001659	POLR1E	98	70.103	ENSCGRG00001006197	Polr1e	94	58.578	Cricetulus_griseus_chok1gshd
ENSGAGG00000001659	POLR1E	98	68.041	ENSCGRG00000006430	Polr1e	94	58.088	Cricetulus_griseus_crigri
ENSGAGG00000001659	POLR1E	99	39.423	ENSCSEG00000005121	polr1e	99	39.423	Cynoglossus_semilaevis
ENSGAGG00000001659	POLR1E	99	40.482	ENSCVAG00000019759	polr1e	97	40.741	Cyprinodon_variegatus
ENSGAGG00000001659	POLR1E	96	39.109	ENSDARG00000006434	polr1e	96	39.500	Danio_rerio
ENSGAGG00000001659	POLR1E	98	70.968	ENSDNOG00000010257	POLR1E	83	70.874	Dasypus_novemcinctus
ENSGAGG00000001659	POLR1E	86	52.825	ENSETEG00000018204	POLR1E	99	54.494	Echinops_telfairi
ENSGAGG00000001659	POLR1E	98	60.145	ENSEASG00005000675	POLR1E	98	60.097	Equus_asinus_asinus
ENSGAGG00000001659	POLR1E	98	60.145	ENSECAG00000014669	POLR1E	98	60.097	Equus_caballus
ENSGAGG00000001659	POLR1E	99	50.249	ENSEEUG00000011928	POLR1E	84	52.273	Erinaceus_europaeus
ENSGAGG00000001659	POLR1E	98	42.714	ENSELUG00000008150	polr1e	96	42.716	Esox_lucius
ENSGAGG00000001659	POLR1E	98	58.596	ENSFCAG00000013081	POLR1E	98	58.680	Felis_catus
ENSGAGG00000001659	POLR1E	97	61.735	ENSFALG00000012950	POLR1E	99	61.869	Ficedula_albicollis
ENSGAGG00000001659	POLR1E	98	58.838	ENSFDAG00000016917	POLR1E	98	58.780	Fukomys_damarensis
ENSGAGG00000001659	POLR1E	99	40.528	ENSFHEG00000009801	polr1e	97	40.786	Fundulus_heteroclitus
ENSGAGG00000001659	POLR1E	96	37.310	ENSGMOG00000003336	POLR1E	93	37.598	Gadus_morhua
ENSGAGG00000001659	POLR1E	98	62.044	ENSGALG00000005395	POLR1E	99	62.162	Gallus_gallus
ENSGAGG00000001659	POLR1E	99	40.909	ENSGAFG00000004850	polr1e	97	41.176	Gambusia_affinis
ENSGAGG00000001659	POLR1E	99	38.902	ENSGACG00000016087	polr1e	97	39.120	Gasterosteus_aculeatus
ENSGAGG00000001659	POLR1E	99	58.513	ENSGGOG00000001882	POLR1E	98	58.637	Gorilla_gorilla
ENSGAGG00000001659	POLR1E	99	42.721	ENSHBUG00000002559	polr1e	96	43.032	Haplochromis_burtoni
ENSGAGG00000001659	POLR1E	98	59.124	ENSHGLG00000002036	POLR1E	98	59.069	Heterocephalus_glaber_female
ENSGAGG00000001659	POLR1E	98	59.367	ENSHGLG00100012784	POLR1E	98	59.314	Heterocephalus_glaber_male
ENSGAGG00000001659	POLR1E	99	40.723	ENSHCOG00000002774	polr1e	97	40.988	Hippocampus_comes
ENSGAGG00000001659	POLR1E	99	39.858	ENSIPUG00000003019	polr1e	96	40.148	Ictalurus_punctatus
ENSGAGG00000001659	POLR1E	99	59.759	ENSSTOG00000009810	POLR1E	98	59.902	Ictidomys_tridecemlineatus
ENSGAGG00000001659	POLR1E	98	59.367	ENSJJAG00000020731	Polr1e	94	59.169	Jaculus_jaculus
ENSGAGG00000001659	POLR1E	99	37.619	ENSKMAG00000000046	polr1e	97	37.805	Kryptolebias_marmoratus
ENSGAGG00000001659	POLR1E	99	42.410	ENSLBEG00000003104	polr1e	96	42.822	Labrus_bergylta
ENSGAGG00000001659	POLR1E	87	57.382	ENSLACG00000003416	POLR1E	99	57.895	Latimeria_chalumnae
ENSGAGG00000001659	POLR1E	99	45.238	ENSLOCG00000012859	polr1e	96	45.906	Lepisosteus_oculatus
ENSGAGG00000001659	POLR1E	97	74.725	ENSLAFG00000012831	POLR1E	97	60.341	Loxodonta_africana
ENSGAGG00000001659	POLR1E	98	58.454	ENSMFAG00000045465	POLR1E	97	54.331	Macaca_fascicularis
ENSGAGG00000001659	POLR1E	98	58.454	ENSMMUG00000017892	POLR1E	98	58.394	Macaca_mulatta
ENSGAGG00000001659	POLR1E	98	53.664	ENSMNEG00000040283	POLR1E	95	59.910	Macaca_nemestrina
ENSGAGG00000001659	POLR1E	98	58.454	ENSMLEG00000031135	POLR1E	98	58.394	Mandrillus_leucophaeus
ENSGAGG00000001659	POLR1E	99	40.288	ENSMAMG00000001260	polr1e	95	41.045	Mastacembelus_armatus
ENSGAGG00000001659	POLR1E	99	42.243	ENSMZEG00005021536	polr1e	96	42.543	Maylandia_zebra
ENSGAGG00000001659	POLR1E	99	58.543	ENSMAUG00000021044	Polr1e	94	59.413	Mesocricetus_auratus
ENSGAGG00000001659	POLR1E	98	61.353	ENSMICG00000003673	POLR1E	98	61.314	Microcebus_murinus
ENSGAGG00000001659	POLR1E	98	59.268	ENSMOCG00000012920	Polr1e	94	59.069	Microtus_ochrogaster
ENSGAGG00000001659	POLR1E	99	41.133	ENSMMOG00000007391	polr1e	98	41.133	Mola_mola
ENSGAGG00000001659	POLR1E	95	62.189	ENSMODG00000002884	POLR1E	97	62.374	Monodelphis_domestica
ENSGAGG00000001659	POLR1E	98	42.462	ENSMALG00000002665	polr1e	96	41.626	Monopterus_albus
ENSGAGG00000001659	POLR1E	98	63.918	MGP_CAROLIEiJ_G0025967	Polr1e	97	56.378	Mus_caroli
ENSGAGG00000001659	POLR1E	98	65.979	ENSMUSG00000028318	Polr1e	99	55.224	Mus_musculus
ENSGAGG00000001659	POLR1E	98	65.979	MGP_PahariEiJ_G0024114	Polr1e	97	58.524	Mus_pahari
ENSGAGG00000001659	POLR1E	98	65.979	MGP_SPRETEiJ_G0026930	Polr1e	97	56.997	Mus_spretus
ENSGAGG00000001659	POLR1E	98	74.194	ENSMPUG00000006040	POLR1E	83	73.585	Mustela_putorius_furo
ENSGAGG00000001659	POLR1E	100	60.047	ENSMLUG00000012688	POLR1E	94	60.636	Myotis_lucifugus
ENSGAGG00000001659	POLR1E	98	59.367	ENSNGAG00000002520	Polr1e	94	59.169	Nannospalax_galili
ENSGAGG00000001659	POLR1E	99	42.180	ENSNBRG00000016822	polr1e	96	42.787	Neolamprologus_brichardi
ENSGAGG00000001659	POLR1E	98	58.696	ENSNLEG00000003616	POLR1E	98	58.881	Nomascus_leucogenys
ENSGAGG00000001659	POLR1E	73	73.750	ENSMEUG00000015372	-	80	73.750	Notamacropus_eugenii
ENSGAGG00000001659	POLR1E	88	49.304	ENSOPRG00000014206	POLR1E	99	50.696	Ochotona_princeps
ENSGAGG00000001659	POLR1E	98	60.488	ENSODEG00000014565	POLR1E	95	60.294	Octodon_degus
ENSGAGG00000001659	POLR1E	99	42.790	ENSONIG00000008921	polr1e	96	43.032	Oreochromis_niloticus
ENSGAGG00000001659	POLR1E	99	59.045	ENSOCUG00000024773	POLR1E	98	59.902	Oryctolagus_cuniculus
ENSGAGG00000001659	POLR1E	99	41.007	ENSORLG00000005143	polr1e	97	41.133	Oryzias_latipes
ENSGAGG00000001659	POLR1E	97	42.513	ENSORLG00020007271	polr1e	99	42.895	Oryzias_latipes_hni
ENSGAGG00000001659	POLR1E	99	40.528	ENSORLG00015000137	polr1e	97	40.640	Oryzias_latipes_hsok
ENSGAGG00000001659	POLR1E	99	40.048	ENSOMEG00000013264	polr1e	95	40.394	Oryzias_melastigma
ENSGAGG00000001659	POLR1E	100	59.294	ENSOGAG00000012981	POLR1E	95	59.854	Otolemur_garnettii
ENSGAGG00000001659	POLR1E	98	59.903	ENSOARG00000011465	POLR1E	94	59.854	Ovis_aries
ENSGAGG00000001659	POLR1E	98	58.454	ENSPPAG00000034566	POLR1E	98	58.394	Pan_paniscus
ENSGAGG00000001659	POLR1E	98	58.838	ENSPPRG00000005649	POLR1E	98	58.924	Panthera_pardus
ENSGAGG00000001659	POLR1E	98	58.838	ENSPTIG00000009774	POLR1E	98	58.924	Panthera_tigris_altaica
ENSGAGG00000001659	POLR1E	98	58.454	ENSPTRG00000020944	POLR1E	98	58.394	Pan_troglodytes
ENSGAGG00000001659	POLR1E	98	58.454	ENSPANG00000025563	POLR1E	98	58.394	Papio_anubis
ENSGAGG00000001659	POLR1E	99	40.855	ENSPKIG00000003562	polr1e	95	41.397	Paramormyrops_kingsleyae
ENSGAGG00000001659	POLR1E	98	66.329	ENSPSIG00000003274	POLR1E	92	67.775	Pelodiscus_sinensis
ENSGAGG00000001659	POLR1E	99	39.949	ENSPMGG00000024169	polr1e	97	39.949	Periophthalmus_magnuspinnatus
ENSGAGG00000001659	POLR1E	99	51.482	ENSPEMG00000022300	-	94	50.754	Peromyscus_maniculatus_bairdii
ENSGAGG00000001659	POLR1E	98	60.498	ENSPEMG00000019151	-	94	58.924	Peromyscus_maniculatus_bairdii
ENSGAGG00000001659	POLR1E	95	61.250	ENSPCIG00000014798	POLR1E	97	61.421	Phascolarctos_cinereus
ENSGAGG00000001659	POLR1E	99	39.503	ENSPFOG00000019627	polr1e	97	39.723	Poecilia_formosa
ENSGAGG00000001659	POLR1E	99	41.727	ENSPLAG00000022679	polr1e	97	42.015	Poecilia_latipinna
ENSGAGG00000001659	POLR1E	87	41.783	ENSPMEG00000022123	polr1e	93	40.997	Poecilia_mexicana
ENSGAGG00000001659	POLR1E	99	41.487	ENSPREG00000009470	polr1e	97	41.769	Poecilia_reticulata
ENSGAGG00000001659	POLR1E	98	58.454	ENSPPYG00000019061	POLR1E	98	58.394	Pongo_abelii
ENSGAGG00000001659	POLR1E	57	62.439	ENSPCAG00000004891	POLR1E	77	57.806	Procavia_capensis
ENSGAGG00000001659	POLR1E	98	61.111	ENSPCOG00000027448	POLR1E	98	61.071	Propithecus_coquereli
ENSGAGG00000001659	POLR1E	97	60.152	ENSPVAG00000007940	POLR1E	83	60.914	Pteropus_vampyrus
ENSGAGG00000001659	POLR1E	99	42.721	ENSPNYG00000001032	polr1e	96	43.032	Pundamilia_nyererei
ENSGAGG00000001659	POLR1E	98	39.494	ENSPNAG00000006987	polr1e	96	39.651	Pygocentrus_nattereri
ENSGAGG00000001659	POLR1E	99	56.784	ENSRNOG00000012664	Polr1e	94	57.457	Rattus_norvegicus
ENSGAGG00000001659	POLR1E	97	58.629	ENSRBIG00000034214	POLR1E	100	58.747	Rhinopithecus_bieti
ENSGAGG00000001659	POLR1E	98	58.696	ENSRROG00000031986	POLR1E	98	58.637	Rhinopithecus_roxellana
ENSGAGG00000001659	POLR1E	98	58.838	ENSSBOG00000021415	POLR1E	98	58.881	Saimiri_boliviensis_boliviensis
ENSGAGG00000001659	POLR1E	87	57.584	ENSSHAG00000016084	POLR1E	99	58.427	Sarcophilus_harrisii
ENSGAGG00000001659	POLR1E	98	43.467	ENSSFOG00015002293	polr1e	98	42.476	Scleropages_formosus
ENSGAGG00000001659	POLR1E	99	43.405	ENSSMAG00000011672	polr1e	90	43.735	Scophthalmus_maximus
ENSGAGG00000001659	POLR1E	99	42.721	ENSSDUG00000022279	polr1e	96	42.892	Seriola_dumerili
ENSGAGG00000001659	POLR1E	99	42.721	ENSSLDG00000024918	polr1e	96	43.032	Seriola_lalandi_dorsalis
ENSGAGG00000001659	POLR1E	70	75.000	ENSSARG00000009810	-	67	75.000	Sorex_araneus
ENSGAGG00000001659	POLR1E	99	68.269	ENSSPUG00000009499	POLR1E	99	68.293	Sphenodon_punctatus
ENSGAGG00000001659	POLR1E	99	42.446	ENSSPAG00000021240	polr1e	97	42.752	Stegastes_partitus
ENSGAGG00000001659	POLR1E	98	60.145	ENSSSCG00000005347	POLR1E	98	60.097	Sus_scrofa
ENSGAGG00000001659	POLR1E	97	62.366	ENSTGUG00000007169	POLR1E	85	62.766	Taeniopygia_guttata
ENSGAGG00000001659	POLR1E	99	41.388	ENSTRUG00000020779	polr1e	99	41.885	Takifugu_rubripes
ENSGAGG00000001659	POLR1E	99	42.005	ENSTNIG00000017812	polr1e	97	42.298	Tetraodon_nigroviridis
ENSGAGG00000001659	POLR1E	97	61.168	ENSTBEG00000013786	POLR1E	84	61.929	Tupaia_belangeri
ENSGAGG00000001659	POLR1E	97	59.950	ENSTTRG00000008294	POLR1E	84	60.652	Tursiops_truncatus
ENSGAGG00000001659	POLR1E	98	60.145	ENSUAMG00000012474	POLR1E	97	61.281	Ursus_americanus
ENSGAGG00000001659	POLR1E	98	60.145	ENSUMAG00000011496	POLR1E	98	60.097	Ursus_maritimus
ENSGAGG00000001659	POLR1E	83	56.598	ENSVPAG00000009048	POLR1E	81	57.434	Vicugna_pacos
ENSGAGG00000001659	POLR1E	98	60.533	ENSVVUG00000019954	POLR1E	98	60.341	Vulpes_vulpes
ENSGAGG00000001659	POLR1E	99	49.642	ENSXETG00000006533	polr1e	99	49.637	Xenopus_tropicalis
ENSGAGG00000001659	POLR1E	99	42.233	ENSXCOG00000013706	polr1e	97	42.786	Xiphophorus_couchianus
ENSGAGG00000001659	POLR1E	99	42.344	ENSXMAG00000012484	polr1e	97	42.647	Xiphophorus_maculatus