EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000001677 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 30486 bases
Position: chrPPEB01001838.1:41431-71916
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000002070	MMR_HSR1	PF01926.23	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000002357	-	2785	-	ENSGAGP00000002070	581 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000001677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000001677's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000001677	-	92	87.030	ENSGAGG00000024938	EHD3	99	87.030
ENSGAGG00000001677	-	92	73.408	ENSGAGG00000022066	EHD2	99	73.408
ENSGAGG00000001677	-	92	76.119	ENSGAGG00000020474	EHD4	99	76.119

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000001677	-	93	93.900	ENSG00000110047	EHD1	100	98.765	Homo_sapiens
ENSGAGG00000001677	-	90	87.885	ENSAPOG00000013440	ehd1a	98	87.885	Acanthochromis_polyacanthus
ENSGAGG00000001677	-	96	91.935	ENSAMEG00000017785	EHD1	99	90.231	Ailuropoda_melanoleuca
ENSGAGG00000001677	-	90	87.115	ENSACIG00000022182	ehd1a	98	87.115	Amphilophus_citrinellus
ENSGAGG00000001677	-	90	87.500	ENSAOCG00000016322	ehd1a	98	87.500	Amphiprion_ocellaris
ENSGAGG00000001677	-	90	87.500	ENSAPEG00000010363	ehd1a	98	87.500	Amphiprion_percula
ENSGAGG00000001677	-	90	87.115	ENSATEG00000013980	ehd1a	98	87.115	Anabas_testudineus
ENSGAGG00000001677	-	93	93.715	ENSANAG00000034810	EHD1	100	94.382	Aotus_nancymaae
ENSGAGG00000001677	-	90	87.308	ENSACLG00000016016	ehd1a	98	87.308	Astatotilapia_calliptera
ENSGAGG00000001677	-	92	85.581	ENSAMXG00000039344	ehd1a	99	85.581	Astyanax_mexicanus
ENSGAGG00000001677	-	92	82.772	ENSAMXG00000031892	-	100	82.772	Astyanax_mexicanus
ENSGAGG00000001677	-	92	94.757	ENSBTAG00000050712	EHD1	100	94.757	Bos_taurus
ENSGAGG00000001677	-	92	65.619	WBGene00004373	rme-1	97	65.741	Caenorhabditis_elegans
ENSGAGG00000001677	-	93	93.530	ENSCJAG00000002660	EHD1	100	94.195	Callithrix_jacchus
ENSGAGG00000001677	-	76	92.483	ENSCAFG00000014128	EHD1	92	94.009	Canis_familiaris
ENSGAGG00000001677	-	94	93.078	ENSCAFG00020014846	EHD1	100	94.569	Canis_lupus_dingo
ENSGAGG00000001677	-	92	94.757	ENSCHIG00000020707	-	100	94.757	Capra_hircus
ENSGAGG00000001677	-	92	94.757	ENSCPOG00000008157	EHD1	100	94.757	Cavia_porcellus
ENSGAGG00000001677	-	96	91.921	ENSCCAG00000004590	EHD1	100	94.382	Cebus_capucinus
ENSGAGG00000001677	-	96	92.280	ENSCATG00000010658	EHD1	97	94.382	Cercocebus_atys
ENSGAGG00000001677	-	92	94.757	ENSCLAG00000016412	EHD1	100	94.757	Chinchilla_lanigera
ENSGAGG00000001677	-	92	94.569	ENSCSAG00000007397	EHD1	100	94.569	Chlorocebus_sabaeus
ENSGAGG00000001677	-	91	98.674	ENSCPBG00000023692	EHD1	99	98.674	Chrysemys_picta_bellii
ENSGAGG00000001677	-	96	92.280	ENSCANG00000042123	EHD1	100	94.569	Colobus_angolensis_palliatus
ENSGAGG00000001677	-	92	94.382	ENSCGRG00001019701	Ehd1	100	94.382	Cricetulus_griseus_chok1gshd
ENSGAGG00000001677	-	87	93.638	ENSCGRG00000000662	Ehd1	99	93.638	Cricetulus_griseus_crigri
ENSGAGG00000001677	-	90	85.577	ENSCSEG00000006078	ehd1a	98	85.577	Cynoglossus_semilaevis
ENSGAGG00000001677	-	90	87.115	ENSCVAG00000012152	ehd1a	98	87.115	Cyprinodon_variegatus
ENSGAGG00000001677	-	92	85.929	ENSDARG00000014793	ehd1b	100	85.929	Danio_rerio
ENSGAGG00000001677	-	92	85.150	ENSDARG00000098853	ehd1a	99	85.150	Danio_rerio
ENSGAGG00000001677	-	62	94.722	ENSDNOG00000017834	EHD1	96	94.722	Dasypus_novemcinctus
ENSGAGG00000001677	-	92	94.569	ENSDORG00000030186	Ehd1	100	94.569	Dipodomys_ordii
ENSGAGG00000001677	-	92	68.333	FBgn0016693	Past1	99	68.785	Drosophila_melanogaster
ENSGAGG00000001677	-	54	79.487	ENSEBUG00000010829	EHD1	90	79.487	Eptatretus_burgeri
ENSGAGG00000001677	-	92	78.464	ENSEBUG00000009968	EHD1	99	78.464	Eptatretus_burgeri
ENSGAGG00000001677	-	92	94.757	ENSEASG00005018250	EHD1	100	94.757	Equus_asinus_asinus
ENSGAGG00000001677	-	92	94.757	ENSECAG00000011638	EHD1	100	94.757	Equus_caballus
ENSGAGG00000001677	-	91	86.011	ENSELUG00000007973	-	99	86.011	Esox_lucius
ENSGAGG00000001677	-	91	85.985	ENSELUG00000016093	ehd1b	99	85.985	Esox_lucius
ENSGAGG00000001677	-	93	94.270	ENSFCAG00000027734	EHD1	97	94.944	Felis_catus
ENSGAGG00000001677	-	92	94.569	ENSFDAG00000007697	EHD1	100	94.569	Fukomys_damarensis
ENSGAGG00000001677	-	90	87.885	ENSFHEG00000002690	ehd1a	98	87.885	Fundulus_heteroclitus
ENSGAGG00000001677	-	90	86.346	ENSGMOG00000012192	ehd1a	99	86.346	Gadus_morhua
ENSGAGG00000001677	-	90	87.692	ENSGAFG00000000730	ehd1a	98	87.692	Gambusia_affinis
ENSGAGG00000001677	-	90	86.154	ENSGACG00000017605	ehd1a	98	86.154	Gasterosteus_aculeatus
ENSGAGG00000001677	-	90	87.308	ENSHBUG00000012087	ehd1a	98	87.308	Haplochromis_burtoni
ENSGAGG00000001677	-	92	94.757	ENSHGLG00000010254	EHD1	100	94.757	Heterocephalus_glaber_female
ENSGAGG00000001677	-	92	94.757	ENSHGLG00100014206	EHD1	100	94.757	Heterocephalus_glaber_male
ENSGAGG00000001677	-	90	86.731	ENSHCOG00000006825	ehd1a	98	86.731	Hippocampus_comes
ENSGAGG00000001677	-	92	83.271	ENSIPUG00000017390	EHD1	99	83.271	Ictalurus_punctatus
ENSGAGG00000001677	-	92	85.768	ENSIPUG00000002819	ehd1a	99	85.768	Ictalurus_punctatus
ENSGAGG00000001677	-	93	94.270	ENSSTOG00000009829	EHD1	100	94.757	Ictidomys_tridecemlineatus
ENSGAGG00000001677	-	92	94.382	ENSJJAG00000022299	Ehd1	100	94.382	Jaculus_jaculus
ENSGAGG00000001677	-	90	86.538	ENSKMAG00000004764	ehd1a	98	86.538	Kryptolebias_marmoratus
ENSGAGG00000001677	-	90	87.308	ENSLBEG00000004390	ehd1a	98	87.308	Labrus_bergylta
ENSGAGG00000001677	-	92	88.993	ENSLACG00000018148	EHD1	100	88.993	Latimeria_chalumnae
ENSGAGG00000001677	-	91	80.669	ENSLOCG00000000924	ehd1b	99	78.445	Lepisosteus_oculatus
ENSGAGG00000001677	-	95	89.048	ENSLAFG00000011643	EHD1	100	91.760	Loxodonta_africana
ENSGAGG00000001677	-	93	93.900	ENSMFAG00000032608	EHD1	100	94.569	Macaca_fascicularis
ENSGAGG00000001677	-	93	93.900	ENSMMUG00000003972	EHD1	97	94.569	Macaca_mulatta
ENSGAGG00000001677	-	93	93.900	ENSMNEG00000031673	EHD1	100	94.569	Macaca_nemestrina
ENSGAGG00000001677	-	93	93.900	ENSMLEG00000031992	EHD1	100	94.569	Mandrillus_leucophaeus
ENSGAGG00000001677	-	90	87.308	ENSMAMG00000021737	ehd1a	98	87.308	Mastacembelus_armatus
ENSGAGG00000001677	-	90	87.308	ENSMZEG00005004305	ehd1a	98	87.308	Maylandia_zebra
ENSGAGG00000001677	-	92	94.382	ENSMAUG00000013823	Ehd1	100	94.382	Mesocricetus_auratus
ENSGAGG00000001677	-	93	94.085	ENSMICG00000001239	EHD1	99	94.357	Microcebus_murinus
ENSGAGG00000001677	-	92	94.382	ENSMOCG00000015517	Ehd1	100	94.382	Microtus_ochrogaster
ENSGAGG00000001677	-	90	86.756	ENSMMOG00000003005	ehd1a	98	86.756	Mola_mola
ENSGAGG00000001677	-	90	86.538	ENSMALG00000012679	ehd1a	98	86.538	Monopterus_albus
ENSGAGG00000001677	-	92	94.382	MGP_CAROLIEiJ_G0022603	Ehd1	100	94.382	Mus_caroli
ENSGAGG00000001677	-	92	94.382	ENSMUSG00000024772	Ehd1	100	94.382	Mus_musculus
ENSGAGG00000001677	-	92	94.195	MGP_PahariEiJ_G0014097	Ehd1	100	94.195	Mus_pahari
ENSGAGG00000001677	-	92	94.382	MGP_SPRETEiJ_G0023514	Ehd1	100	94.382	Mus_spretus
ENSGAGG00000001677	-	92	94.757	ENSMPUG00000012497	EHD1	100	94.757	Mustela_putorius_furo
ENSGAGG00000001677	-	92	94.569	ENSNGAG00000020358	Ehd1	100	94.569	Nannospalax_galili
ENSGAGG00000001677	-	90	86.923	ENSNBRG00000002933	ehd1a	98	86.923	Neolamprologus_brichardi
ENSGAGG00000001677	-	93	93.900	ENSNLEG00000005375	EHD1	100	94.569	Nomascus_leucogenys
ENSGAGG00000001677	-	92	94.007	ENSOPRG00000011350	EHD1	100	94.007	Ochotona_princeps
ENSGAGG00000001677	-	92	94.757	ENSODEG00000014527	EHD1	100	94.757	Octodon_degus
ENSGAGG00000001677	-	57	93.656	ENSOCUG00000029532	EHD1	96	95.062	Oryctolagus_cuniculus
ENSGAGG00000001677	-	90	86.346	ENSORLG00000022561	ehd1a	98	86.346	Oryzias_latipes
ENSGAGG00000001677	-	90	86.154	ENSORLG00020018451	ehd1a	98	86.154	Oryzias_latipes_hni
ENSGAGG00000001677	-	90	86.154	ENSORLG00015017672	ehd1a	98	86.154	Oryzias_latipes_hsok
ENSGAGG00000001677	-	90	86.923	ENSOMEG00000019329	ehd1a	98	86.923	Oryzias_melastigma
ENSGAGG00000001677	-	92	94.569	ENSOGAG00000009351	EHD1	100	94.569	Otolemur_garnettii
ENSGAGG00000001677	-	84	95.082	ENSOARG00000010447	EHD1	99	95.082	Ovis_aries
ENSGAGG00000001677	-	93	93.900	ENSPPAG00000037178	EHD1	100	94.569	Pan_paniscus
ENSGAGG00000001677	-	93	92.237	ENSPPRG00000006031	EHD1	97	92.697	Panthera_pardus
ENSGAGG00000001677	-	93	93.900	ENSPTRG00000003851	EHD1	97	94.569	Pan_troglodytes
ENSGAGG00000001677	-	96	92.460	ENSPANG00000023358	EHD1	97	94.569	Papio_anubis
ENSGAGG00000001677	-	62	87.500	ENSPKIG00000020297	-	88	87.500	Paramormyrops_kingsleyae
ENSGAGG00000001677	-	90	85.496	ENSPKIG00000023165	-	99	85.496	Paramormyrops_kingsleyae
ENSGAGG00000001677	-	92	97.378	ENSPSIG00000005727	EHD1	100	97.378	Pelodiscus_sinensis
ENSGAGG00000001677	-	91	85.822	ENSPMGG00000017810	ehd1a	98	85.797	Periophthalmus_magnuspinnatus
ENSGAGG00000001677	-	92	94.569	ENSPEMG00000010917	Ehd1	100	94.569	Peromyscus_maniculatus_bairdii
ENSGAGG00000001677	-	92	93.633	ENSPCIG00000014850	EHD1	100	93.633	Phascolarctos_cinereus
ENSGAGG00000001677	-	67	71.026	ENSPCIG00000017053	-	96	71.026	Phascolarctos_cinereus
ENSGAGG00000001677	-	90	87.885	ENSPFOG00000010613	ehd1a	97	87.885	Poecilia_formosa
ENSGAGG00000001677	-	90	87.885	ENSPLAG00000023296	ehd1a	98	87.885	Poecilia_latipinna
ENSGAGG00000001677	-	90	87.885	ENSPMEG00000003397	ehd1a	98	87.885	Poecilia_mexicana
ENSGAGG00000001677	-	90	87.692	ENSPREG00000015893	ehd1a	98	87.692	Poecilia_reticulata
ENSGAGG00000001677	-	92	94.569	ENSPPYG00000003093	EHD1	100	94.569	Pongo_abelii
ENSGAGG00000001677	-	93	94.238	ENSPCOG00000010309	EHD1	99	94.757	Propithecus_coquereli
ENSGAGG00000001677	-	92	93.820	ENSPVAG00000007890	EHD1	100	93.820	Pteropus_vampyrus
ENSGAGG00000001677	-	90	87.308	ENSPNYG00000015448	ehd1a	98	87.308	Pundamilia_nyererei
ENSGAGG00000001677	-	92	85.206	ENSPNAG00000023091	ehd1a	99	85.206	Pygocentrus_nattereri
ENSGAGG00000001677	-	91	86.441	ENSPNAG00000007408	EHD1	99	86.441	Pygocentrus_nattereri
ENSGAGG00000001677	-	92	94.382	ENSRNOG00000043503	Ehd1	100	94.382	Rattus_norvegicus
ENSGAGG00000001677	-	93	93.715	ENSRBIG00000039111	EHD1	100	94.569	Rhinopithecus_bieti
ENSGAGG00000001677	-	93	93.715	ENSRROG00000026366	EHD1	100	94.569	Rhinopithecus_roxellana
ENSGAGG00000001677	-	93	93.715	ENSSBOG00000023399	EHD1	100	94.382	Saimiri_boliviensis_boliviensis
ENSGAGG00000001677	-	68	70.960	ENSSHAG00000007430	-	94	69.363	Sarcophilus_harrisii
ENSGAGG00000001677	-	91	87.382	ENSSFOG00015006481	-	99	87.382	Scleropages_formosus
ENSGAGG00000001677	-	84	86.912	ENSSFOG00015019587	EHD1	100	86.912	Scleropages_formosus
ENSGAGG00000001677	-	90	86.538	ENSSMAG00000018210	ehd1a	98	86.538	Scophthalmus_maximus
ENSGAGG00000001677	-	90	87.885	ENSSDUG00000016436	ehd1a	98	87.885	Seriola_dumerili
ENSGAGG00000001677	-	90	87.885	ENSSLDG00000015328	ehd1a	98	87.885	Seriola_lalandi_dorsalis
ENSGAGG00000001677	-	90	87.692	ENSSPAG00000008682	ehd1a	98	87.692	Stegastes_partitus
ENSGAGG00000001677	-	92	94.925	ENSSSCG00000013017	EHD1	99	94.925	Sus_scrofa
ENSGAGG00000001677	-	90	86.923	ENSTRUG00000025890	ehd1a	98	86.923	Takifugu_rubripes
ENSGAGG00000001677	-	90	86.923	ENSTNIG00000016792	ehd1a	97	86.923	Tetraodon_nigroviridis
ENSGAGG00000001677	-	72	85.612	ENSTBEG00000007057	EHD1	100	85.612	Tupaia_belangeri
ENSGAGG00000001677	-	92	93.820	ENSTTRG00000008887	EHD1	100	93.820	Tursiops_truncatus
ENSGAGG00000001677	-	92	94.569	ENSUAMG00000012071	EHD1	100	94.569	Ursus_americanus
ENSGAGG00000001677	-	92	92.193	ENSUMAG00000007890	EHD1	99	93.143	Ursus_maritimus
ENSGAGG00000001677	-	94	93.260	ENSVVUG00000027552	EHD1	86	91.413	Vulpes_vulpes
ENSGAGG00000001677	-	92	89.139	ENSXETG00000001638	ehd1	100	89.139	Xenopus_tropicalis
ENSGAGG00000001677	-	91	86.604	ENSXCOG00000001781	ehd1a	98	86.604	Xiphophorus_couchianus
ENSGAGG00000001677	-	90	87.692	ENSXMAG00000005301	ehd1a	98	87.692	Xiphophorus_maculatus