EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAGG00000001743 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Gopherus_agassizii
Status
putative
Strand
Plus strand
Length
30902 bases
Position
chrPPEB01004165.1:5860-36761
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAGP00000002155tRNA_SADPF07973.142.7e-1211
ENSGAGP00000002168tRNA_SADPF07973.142.7e-1211
ENSGAGP00000002155HGTP_anticodonPF03129.201.4e-1811
ENSGAGP00000002168HGTP_anticodonPF03129.204.3e-0811
ENSGAGP00000002155tRNA-synt_2bPF00587.254.4e-3511
ENSGAGP00000002168tRNA-synt_2bPF00587.254.6e-3511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAGT00000002474-2272-ENSGAGP00000002168708 (aa)--
ENSGAGT00000002461-2251-ENSGAGP00000002155701 (aa)--
Gene Model
Click here to download ENSGAGG00000001743's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000001743's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAGG00000001743-9666.766ENSGAGG00000019945TARS9566.766
ENSGAGG00000001743-9665.075ENSGAGG00000010775TARSL28465.075
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAGG00000001743-9666.319ENSG00000113407TARS9366.319Homo_sapiens
ENSGAGG00000001743-9666.369ENSAPOG00000013465tars9366.369Acanthochromis_polyacanthus
ENSGAGG00000001743-8068.262ENSAPOG00000021756tarsl210068.262Acanthochromis_polyacanthus
ENSGAGG00000001743-8063.087ENSAMEG00000003451TARS9263.087Ailuropoda_melanoleuca
ENSGAGG00000001743-9662.054ENSACIG00000015719tars10066.744Amphilophus_citrinellus
ENSGAGG00000001743-9666.071ENSACIG00000005189tarsl29666.071Amphilophus_citrinellus
ENSGAGG00000001743-9666.071ENSAOCG00000009313tarsl210064.618Amphiprion_ocellaris
ENSGAGG00000001743-9666.815ENSAOCG00000023847tars9366.815Amphiprion_ocellaris
ENSGAGG00000001743-9666.815ENSAPEG00000013710tars9366.815Amphiprion_percula
ENSGAGG00000001743-9665.923ENSAPEG00000007987tarsl29765.923Amphiprion_percula
ENSGAGG00000001743-9666.815ENSATEG00000023154tars9366.815Anabas_testudineus
ENSGAGG00000001743-9665.923ENSATEG00000004034tarsl28365.923Anabas_testudineus
ENSGAGG00000001743-9667.015ENSAPLG00000016069TARS9767.015Anas_platyrhynchos
ENSGAGG00000001743-9666.319ENSANAG00000020786TARS9366.319Aotus_nancymaae
ENSGAGG00000001743-9665.976ENSACLG00000018601tarsl28265.976Astatotilapia_calliptera
ENSGAGG00000001743-9765.492ENSACLG00000018603tars9865.492Astatotilapia_calliptera
ENSGAGG00000001743-9667.660ENSAMXG00000014068tars9367.660Astyanax_mexicanus
ENSGAGG00000001743-9766.226ENSAMXG00000020852tarsl27966.226Astyanax_mexicanus
ENSGAGG00000001743-9666.170ENSBTAG00000014261TARS9366.170Bos_taurus
ENSGAGG00000001743-9666.170ENSCJAG00000018663TARS9366.170Callithrix_jacchus
ENSGAGG00000001743-9665.723ENSCAFG00000018858TARS9365.723Canis_familiaris
ENSGAGG00000001743-9665.723ENSCAFG00020016830TARS9365.723Canis_lupus_dingo
ENSGAGG00000001743-9765.538ENSCHIG00000013566TARS9865.538Capra_hircus
ENSGAGG00000001743-9666.319ENSTSYG00000010851TARS9366.319Carlito_syrichta
ENSGAGG00000001743-9653.709ENSCAPG00000011392TARS9953.709Cavia_aperea
ENSGAGG00000001743-9666.170ENSCPOG00000014012TARS9066.170Cavia_porcellus
ENSGAGG00000001743-9666.319ENSCCAG00000019805TARS9366.319Cebus_capucinus
ENSGAGG00000001743-9666.319ENSCATG00000038037TARS9366.319Cercocebus_atys
ENSGAGG00000001743-9666.617ENSCLAG00000008983TARS9366.617Chinchilla_lanigera
ENSGAGG00000001743-9666.170ENSCSAG00000017162TARS9366.170Chlorocebus_sabaeus
ENSGAGG00000001743-7965.789ENSCHOG00000005325-8565.789Choloepus_hoffmanni
ENSGAGG00000001743-8767.863ENSCHOG00000013155-10067.863Choloepus_hoffmanni
ENSGAGG00000001743-9666.170ENSCPBG00000013172TARS9766.170Chrysemys_picta_bellii
ENSGAGG00000001743-10095.435ENSCPBG00000008240-10095.435Chrysemys_picta_bellii
ENSGAGG00000001743-8863.577ENSCING00000004310-9863.577Ciona_intestinalis
ENSGAGG00000001743-9666.319ENSCANG00000031774TARS9366.319Colobus_angolensis_palliatus
ENSGAGG00000001743-9665.723ENSCGRG00001022888Tars9765.723Cricetulus_griseus_chok1gshd
ENSGAGG00000001743-9665.723ENSCGRG00000000978Tars9765.723Cricetulus_griseus_crigri
ENSGAGG00000001743-9666.518ENSCSEG00000011120tarsl28866.518Cynoglossus_semilaevis
ENSGAGG00000001743-9667.560ENSCSEG00000007462tars9467.206Cynoglossus_semilaevis
ENSGAGG00000001743-9666.370ENSCVAG00000009572tarsl28466.370Cyprinodon_variegatus
ENSGAGG00000001743-9666.915ENSCVAG00000012329tars9863.636Cyprinodon_variegatus
ENSGAGG00000001743-6271.363ENSDARG00000092774tarsl210071.363Danio_rerio
ENSGAGG00000001743-9666.766ENSDARG00000013250tars9366.766Danio_rerio
ENSGAGG00000001743-9664.382ENSDNOG00000017275TARS9364.382Dasypus_novemcinctus
ENSGAGG00000001743-9666.617ENSDORG00000008801Tars9866.617Dipodomys_ordii
ENSGAGG00000001743-9463.222ENSETEG00000006292TARS9363.222Echinops_telfairi
ENSGAGG00000001743-9664.829ENSEBUG00000010935tarsl29464.829Eptatretus_burgeri
ENSGAGG00000001743-9666.170ENSEASG00005015075TARS10066.566Equus_asinus_asinus
ENSGAGG00000001743-9666.021ENSECAG00000020854TARS9366.021Equus_caballus
ENSGAGG00000001743-9659.911ENSEEUG00000005701TARS9359.911Erinaceus_europaeus
ENSGAGG00000001743-9766.520ENSELUG00000007414tarsl29965.714Esox_lucius
ENSGAGG00000001743-9664.232ENSELUG00000011403tars9769.565Esox_lucius
ENSGAGG00000001743-9665.872ENSFCAG00000002351TARS9365.872Felis_catus
ENSGAGG00000001743-9666.567ENSFALG00000002131TARS9266.567Ficedula_albicollis
ENSGAGG00000001743-9665.574ENSFDAG00000005928TARS9965.574Fukomys_damarensis
ENSGAGG00000001743-9666.667ENSFHEG00000004551tars9366.667Fundulus_heteroclitus
ENSGAGG00000001743-9666.220ENSFHEG00000010406tarsl210063.118Fundulus_heteroclitus
ENSGAGG00000001743-9654.896ENSGMOG00000013046tars10054.896Gadus_morhua
ENSGAGG00000001743-9657.377ENSGMOG00000002140tarsl29757.824Gadus_morhua
ENSGAGG00000001743-9666.269ENSGALG00000003288TARS8566.269Gallus_gallus
ENSGAGG00000001743-9366.769ENSGAFG00000009417tarsl27966.769Gambusia_affinis
ENSGAGG00000001743-9563.568ENSGAFG00000017077tars10063.568Gambusia_affinis
ENSGAGG00000001743-9666.667ENSGACG00000004921tars9271.118Gasterosteus_aculeatus
ENSGAGG00000001743-9864.928ENSGACG00000014631tarsl29964.928Gasterosteus_aculeatus
ENSGAGG00000001743-9666.170ENSGGOG00000014336TARS9666.170Gorilla_gorilla
ENSGAGG00000001743-9666.220ENSHBUG00000011236tars9366.220Haplochromis_burtoni
ENSGAGG00000001743-9665.774ENSHBUG00000020986tarsl28265.774Haplochromis_burtoni
ENSGAGG00000001743-9666.170ENSHGLG00000004347TARS9366.170Heterocephalus_glaber_female
ENSGAGG00000001743-9666.170ENSHGLG00100016510-9366.170Heterocephalus_glaber_male
ENSGAGG00000001743-9253.023ENSHGLG00100009436-9353.023Heterocephalus_glaber_male
ENSGAGG00000001743-9565.719ENSHCOG00000001263tarsl210069.977Hippocampus_comes
ENSGAGG00000001743-8167.633ENSHCOG00000019262tars9367.633Hippocampus_comes
ENSGAGG00000001743-9766.373ENSIPUG00000010218tarsl28366.373Ictalurus_punctatus
ENSGAGG00000001743-9666.766ENSIPUG00000012104tars9366.766Ictalurus_punctatus
ENSGAGG00000001743-9666.319ENSSTOG00000000811TARS9866.319Ictidomys_tridecemlineatus
ENSGAGG00000001743-9666.617ENSJJAG00000012711Tars9666.617Jaculus_jaculus
ENSGAGG00000001743-9666.319ENSKMAG00000006120tars9366.319Kryptolebias_marmoratus
ENSGAGG00000001743-9864.731ENSKMAG00000001740tarsl29965.872Kryptolebias_marmoratus
ENSGAGG00000001743-9666.071ENSLBEG00000018541tarsl210064.918Labrus_bergylta
ENSGAGG00000001743-9665.923ENSLBEG00000014334tars9365.923Labrus_bergylta
ENSGAGG00000001743-9563.118ENSLBEG00000018238-10063.118Labrus_bergylta
ENSGAGG00000001743-9666.170ENSLACG00000018690-8666.170Latimeria_chalumnae
ENSGAGG00000001743-9666.468ENSLACG00000009316TARS9466.246Latimeria_chalumnae
ENSGAGG00000001743-9854.913ENSLACG00000008719-9555.123Latimeria_chalumnae
ENSGAGG00000001743-9667.560ENSLOCG00000011402tars9367.560Lepisosteus_oculatus
ENSGAGG00000001743-6863.941ENSLOCG00000014607tarsl26263.618Lepisosteus_oculatus
ENSGAGG00000001743-9666.021ENSLAFG00000009855TARS9366.021Loxodonta_africana
ENSGAGG00000001743-9666.319ENSMFAG00000043658TARS9366.319Macaca_fascicularis
ENSGAGG00000001743-9666.319ENSMMUG00000016224TARS9666.319Macaca_mulatta
ENSGAGG00000001743-9666.319ENSMNEG00000035174TARS9366.319Macaca_nemestrina
ENSGAGG00000001743-9661.891ENSMLEG00000037573TARS10063.972Mandrillus_leucophaeus
ENSGAGG00000001743-9666.815ENSMAMG00000007405tars9366.815Mastacembelus_armatus
ENSGAGG00000001743-9665.327ENSMAMG00000005294tarsl28265.327Mastacembelus_armatus
ENSGAGG00000001743-9666.220ENSMZEG00005012967tars9366.220Maylandia_zebra
ENSGAGG00000001743-9665.828ENSMZEG00005005731tarsl28265.828Maylandia_zebra
ENSGAGG00000001743-9636.297ENSMGAG00000002934-9536.297Meleagris_gallopavo
ENSGAGG00000001743-9665.872ENSMICG00000005593TARS10068.739Microcebus_murinus
ENSGAGG00000001743-9665.574ENSMOCG00000002397Tars9764.454Microtus_ochrogaster
ENSGAGG00000001743-8067.730ENSMMOG00000016276tarsl210067.730Mola_mola
ENSGAGG00000001743-9466.415ENSMMOG00000017581tars10066.415Mola_mola
ENSGAGG00000001743-9666.021ENSMODG00000020405TARS9366.021Monodelphis_domestica
ENSGAGG00000001743-9666.071ENSMALG00000001448tars9366.071Monopterus_albus
ENSGAGG00000001743-9665.327ENSMALG00000014473tarsl27865.327Monopterus_albus
ENSGAGG00000001743-9666.021MGP_CAROLIEiJ_G0019674Tars9366.021Mus_caroli
ENSGAGG00000001743-9666.021ENSMUSG00000022241Tars9366.021Mus_musculus
ENSGAGG00000001743-9666.021MGP_PahariEiJ_G0016054Tars9366.021Mus_pahari
ENSGAGG00000001743-9666.170MGP_SPRETEiJ_G0020571Tars9366.170Mus_spretus
ENSGAGG00000001743-9666.468ENSMPUG00000015177TARS9366.468Mustela_putorius_furo
ENSGAGG00000001743-9666.170ENSMLUG00000011189TARS9366.170Myotis_lucifugus
ENSGAGG00000001743-9666.021ENSNGAG00000021115Tars9766.021Nannospalax_galili
ENSGAGG00000001743-5263.562ENSNBRG00000008049-7663.562Neolamprologus_brichardi
ENSGAGG00000001743-9666.220ENSNBRG00000022198tars9366.220Neolamprologus_brichardi
ENSGAGG00000001743-9666.468ENSNLEG00000014187TARS9966.468Nomascus_leucogenys
ENSGAGG00000001743-8060.284ENSMEUG00000002186-9960.284Notamacropus_eugenii
ENSGAGG00000001743-9163.522ENSMEUG00000011216-9963.522Notamacropus_eugenii
ENSGAGG00000001743-9661.401ENSOPRG00000003544TARS9361.401Ochotona_princeps
ENSGAGG00000001743-8664.892ENSODEG00000002089-9166.154Octodon_degus
ENSGAGG00000001743-9165.415ENSODEG00000011907-10065.415Octodon_degus
ENSGAGG00000001743-9666.370ENSONIG00000016982tars9366.370Oreochromis_niloticus
ENSGAGG00000001743-9666.369ENSONIG00000002904tarsl28566.369Oreochromis_niloticus
ENSGAGG00000001743-9666.170ENSOANG00000014432TARS9366.170Ornithorhynchus_anatinus
ENSGAGG00000001743-9666.170ENSOCUG00000000684TARS9366.170Oryctolagus_cuniculus
ENSGAGG00000001743-9665.774ENSORLG00000014313tarsl28665.774Oryzias_latipes
ENSGAGG00000001743-9666.220ENSORLG00000001603tars9366.220Oryzias_latipes
ENSGAGG00000001743-9666.220ENSORLG00020008243tars9366.220Oryzias_latipes_hni
ENSGAGG00000001743-9665.625ENSORLG00020019614tarsl210063.827Oryzias_latipes_hni
ENSGAGG00000001743-9665.923ENSORLG00015017865tarsl28765.923Oryzias_latipes_hsok
ENSGAGG00000001743-9666.220ENSORLG00015000487tars9366.220Oryzias_latipes_hsok
ENSGAGG00000001743-9666.220ENSOMEG00000017135tarsl28366.220Oryzias_melastigma
ENSGAGG00000001743-9666.220ENSOMEG00000013835tars9366.220Oryzias_melastigma
ENSGAGG00000001743-9666.468ENSOGAG00000009129TARS9366.468Otolemur_garnettii
ENSGAGG00000001743-9666.021ENSOARG00000012085TARS9366.021Ovis_aries
ENSGAGG00000001743-9666.319ENSPPAG00000021251TARS9366.319Pan_paniscus
ENSGAGG00000001743-9665.872ENSPPRG00000009764TARS9365.872Panthera_pardus
ENSGAGG00000001743-9665.723ENSPTIG00000020328TARS9365.723Panthera_tigris_altaica
ENSGAGG00000001743-9666.170ENSPTRG00000016775TARS9366.170Pan_troglodytes
ENSGAGG00000001743-9666.319ENSPANG00000011000TARS9366.319Papio_anubis
ENSGAGG00000001743-9565.916ENSPKIG00000010725tars10065.916Paramormyrops_kingsleyae
ENSGAGG00000001743-9665.327ENSPKIG00000020010tarsl28365.327Paramormyrops_kingsleyae
ENSGAGG00000001743-9389.466ENSPSIG00000015501-10089.466Pelodiscus_sinensis
ENSGAGG00000001743-9666.468ENSPSIG00000015697TARS7566.468Pelodiscus_sinensis
ENSGAGG00000001743-8068.794ENSPMGG00000006955tarsl210068.794Periophthalmus_magnuspinnatus
ENSGAGG00000001743-9566.817ENSPMGG00000012642tars10066.817Periophthalmus_magnuspinnatus
ENSGAGG00000001743-9665.723ENSPEMG00000024237Tars9763.824Peromyscus_maniculatus_bairdii
ENSGAGG00000001743-9665.574ENSPMAG00000004957tarsl28265.574Petromyzon_marinus
ENSGAGG00000001743-9367.127ENSPCIG00000016353TARS9967.127Phascolarctos_cinereus
ENSGAGG00000001743-9666.716ENSPFOG00000013908tarsl28266.716Poecilia_formosa
ENSGAGG00000001743-9666.667ENSPFOG00000010429tars9366.667Poecilia_formosa
ENSGAGG00000001743-9666.716ENSPLAG00000011183tarsl28566.716Poecilia_latipinna
ENSGAGG00000001743-9566.767ENSPLAG00000008773tars10066.767Poecilia_latipinna
ENSGAGG00000001743-9666.716ENSPMEG00000011154tarsl28366.716Poecilia_mexicana
ENSGAGG00000001743-9666.667ENSPMEG00000016101tars9366.667Poecilia_mexicana
ENSGAGG00000001743-9563.447ENSPREG00000008101tarsl210063.447Poecilia_reticulata
ENSGAGG00000001743-9666.815ENSPREG00000008856tars9366.815Poecilia_reticulata
ENSGAGG00000001743-8867.857ENSPPYG00000015382TARS9967.857Pongo_abelii
ENSGAGG00000001743-7262.469ENSPCAG00000006885TARS7962.469Procavia_capensis
ENSGAGG00000001743-9653.471ENSPCOG00000019044TARS9554.613Propithecus_coquereli
ENSGAGG00000001743-9665.872ENSPVAG00000008939TARS9365.872Pteropus_vampyrus
ENSGAGG00000001743-9564.018ENSPNYG00000009768tarsl210064.018Pundamilia_nyererei
ENSGAGG00000001743-9666.220ENSPNYG00000003864tars9366.220Pundamilia_nyererei
ENSGAGG00000001743-9667.660ENSPNAG00000014293tars9367.660Pygocentrus_nattereri
ENSGAGG00000001743-9666.518ENSPNAG00000015361tarsl28166.518Pygocentrus_nattereri
ENSGAGG00000001743-9666.021ENSRNOG00000019023Tars9766.021Rattus_norvegicus
ENSGAGG00000001743-9666.170ENSRBIG00000009935TARS9366.170Rhinopithecus_bieti
ENSGAGG00000001743-9666.170ENSRROG00000030698TARS9366.170Rhinopithecus_roxellana
ENSGAGG00000001743-9666.319ENSSBOG00000021854TARS9366.319Saimiri_boliviensis_boliviensis
ENSGAGG00000001743-5967.554ENSSHAG00000011084TARS9667.554Sarcophilus_harrisii
ENSGAGG00000001743-9667.213ENSSFOG00015015118tars9367.213Scleropages_formosus
ENSGAGG00000001743-9166.823ENSSFOG00015017057tarsl28366.823Scleropages_formosus
ENSGAGG00000001743-9665.625ENSSMAG00000009984tarsl28265.625Scophthalmus_maximus
ENSGAGG00000001743-9566.617ENSSMAG00000009718tars9266.617Scophthalmus_maximus
ENSGAGG00000001743-9666.220ENSSDUG00000007476tarsl28366.220Seriola_dumerili
ENSGAGG00000001743-9666.220ENSSDUG00000014184tars9764.137Seriola_dumerili
ENSGAGG00000001743-9666.220ENSSLDG00000020363tars9366.220Seriola_lalandi_dorsalis
ENSGAGG00000001743-9666.369ENSSLDG00000016574tarsl28366.369Seriola_lalandi_dorsalis
ENSGAGG00000001743-8360.103ENSSARG00000009829TARS9260.103Sorex_araneus
ENSGAGG00000001743-9665.127ENSSPUG00000016844TARS9865.127Sphenodon_punctatus
ENSGAGG00000001743-8769.657ENSSPUG00000000604-9480.967Sphenodon_punctatus
ENSGAGG00000001743-9665.680ENSSPAG00000020448tarsl28365.680Stegastes_partitus
ENSGAGG00000001743-8967.737ENSSPAG00000019655tars8867.680Stegastes_partitus
ENSGAGG00000001743-9566.867ENSSSCG00000016817TARS10066.867Sus_scrofa
ENSGAGG00000001743-9666.269ENSTGUG00000001925TARS9566.269Taeniopygia_guttata
ENSGAGG00000001743-9666.468ENSTRUG00000002380tars9366.468Takifugu_rubripes
ENSGAGG00000001743-6269.565ENSTRUG00000003405tarsl210069.565Takifugu_rubripes
ENSGAGG00000001743-9566.119ENSTNIG00000015959tars9466.119Tetraodon_nigroviridis
ENSGAGG00000001743-9664.985ENSTNIG00000011928tarsl28464.985Tetraodon_nigroviridis
ENSGAGG00000001743-7666.110ENSTBEG00000002740TARS7366.110Tupaia_belangeri
ENSGAGG00000001743-9664.232ENSTTRG00000005996TARS9464.232Tursiops_truncatus
ENSGAGG00000001743-9665.574ENSUAMG00000027966TARS9365.574Ursus_americanus
ENSGAGG00000001743-9665.574ENSUMAG00000013743TARS9365.574Ursus_maritimus
ENSGAGG00000001743-8165.439ENSVPAG00000010118TARS8665.439Vicugna_pacos
ENSGAGG00000001743-9665.574ENSVVUG00000022139TARS8465.574Vulpes_vulpes
ENSGAGG00000001743-9666.373ENSXETG00000018640-9966.373Xenopus_tropicalis
ENSGAGG00000001743-9666.170ENSXETG00000009868tars9366.170Xenopus_tropicalis
ENSGAGG00000001743-9765.832ENSXETG00000020313tarsl28365.832Xenopus_tropicalis
ENSGAGG00000001743-9663.001ENSXCOG00000012648tarsl29863.001Xiphophorus_couchianus
ENSGAGG00000001743-9467.221ENSXCOG00000009480tars10067.221Xiphophorus_couchianus
ENSGAGG00000001743-9666.964ENSXMAG00000002878tars9366.964Xiphophorus_maculatus
ENSGAGG00000001743-9666.122ENSXMAG00000016645tarsl210063.268Xiphophorus_maculatus

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