EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAGG00000001888 (Gene tree)
Gene ID
-
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Gopherus_agassizii
Status
putative
Strand
Minus strand
Length
22198 bases
Position
chrPPEB01011634.1:10765-32962
Accession
8557
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAGP00000002311PABPPF00658.185.3e-3211
ENSGAGP00000002311RRM_5PF13893.61.7e-0912
ENSGAGP00000002311RRM_5PF13893.61.7e-0922
ENSGAGP00000002311RRM_1PF00076.223e-9214
ENSGAGP00000002311RRM_1PF00076.223e-9224
ENSGAGP00000002311RRM_1PF00076.223e-9234
ENSGAGP00000002311RRM_1PF00076.223e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAGT00000002649PABPC4-2012264-ENSGAGP00000002311630 (aa)--
Gene Model
Click here to download ENSGAGG00000001888's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000001888's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAGG00000001888PABPC45730.000ENSGAGG00000007529TIA17330.000
ENSGAGG00000001888PABPC49873.885ENSGAGG00000000589PABPC1L9873.885
ENSGAGG00000001888PABPC45836.145ENSGAGG00000022382ELAVL28936.145
ENSGAGG00000001888PABPC49979.715ENSGAGG00000000869PABPC19879.873
ENSGAGG00000001888PABPC45834.940ENSGAGG00000018269ELAVL48734.940
ENSGAGG00000001888PABPC45833.553ENSGAGG00000024119ELAVL19533.553
ENSGAGG00000001888PABPC46030.625ENSGAGG00000016141ELAVL38130.625
ENSGAGG00000001888PABPC45134.483ENSGAGG00000005858-9534.483
ENSGAGG00000001888PABPC45741.530ENSGAGG00000025055SF3B47041.530
ENSGAGG00000001888PABPC45837.500ENSGAGG00000023497CELF25338.372
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAGG00000001888PABPC410091.587ENSG00000090621PABPC410097.674Homo_sapiens
ENSGAGG00000001888PABPC49986.486ENSAPOG00000001161pabpc49986.457Acanthochromis_polyacanthus
ENSGAGG00000001888PABPC410086.495ENSAMEG00000011535-9987.557Ailuropoda_melanoleuca
ENSGAGG00000001888PABPC49953.055ENSAMEG00000015083-9953.055Ailuropoda_melanoleuca
ENSGAGG00000001888PABPC410086.299ENSACIG00000023343pabpc49986.929Amphilophus_citrinellus
ENSGAGG00000001888PABPC49986.804ENSAOCG00000021529pabpc49986.772Amphiprion_ocellaris
ENSGAGG00000001888PABPC49986.804ENSAPEG00000019196pabpc49986.772Amphiprion_percula
ENSGAGG00000001888PABPC49986.190ENSATEG00000007402pabpc49986.321Anabas_testudineus
ENSGAGG00000001888PABPC410097.619ENSAPLG00000009729-10097.619Anas_platyrhynchos
ENSGAGG00000001888PABPC49995.528ENSACAG00000002544PABPC410095.528Anolis_carolinensis
ENSGAGG00000001888PABPC410091.587ENSANAG00000025079PABPC49991.587Aotus_nancymaae
ENSGAGG00000001888PABPC410085.984ENSACLG00000019558pabpc49986.614Astatotilapia_calliptera
ENSGAGG00000001888PABPC410081.546ENSAMXG00000018779pabpc49982.177Astyanax_mexicanus
ENSGAGG00000001888PABPC410087.888ENSBTAG00000017125PABPC49988.509Bos_taurus
ENSGAGG00000001888PABPC45785.030ENSBTAG00000048536-9385.030Bos_taurus
ENSGAGG00000001888PABPC47882.787ENSCJAG00000045953-9382.787Callithrix_jacchus
ENSGAGG00000001888PABPC410091.429ENSCJAG00000002512-9991.429Callithrix_jacchus
ENSGAGG00000001888PABPC410091.746ENSCAFG00000003081PABPC49991.746Canis_familiaris
ENSGAGG00000001888PABPC49692.206ENSCAFG00020004161PABPC49987.709Canis_lupus_dingo
ENSGAGG00000001888PABPC410070.762ENSCHIG00000023385-9970.762Capra_hircus
ENSGAGG00000001888PABPC410087.709ENSCHIG00000019398-9987.709Capra_hircus
ENSGAGG00000001888PABPC410091.587ENSTSYG00000006532PABPC49991.587Carlito_syrichta
ENSGAGG00000001888PABPC49991.388ENSCAPG00000015984PABPC49991.388Cavia_aperea
ENSGAGG00000001888PABPC410091.587ENSCPOG00000009552PABPC49991.587Cavia_porcellus
ENSGAGG00000001888PABPC410091.429ENSCCAG00000037306PABPC49991.429Cebus_capucinus
ENSGAGG00000001888PABPC410091.587ENSCATG00000042164PABPC49991.587Cercocebus_atys
ENSGAGG00000001888PABPC410091.270ENSCLAG00000011899PABPC49991.270Chinchilla_lanigera
ENSGAGG00000001888PABPC410087.557ENSCSAG00000001135PABPC49987.557Chlorocebus_sabaeus
ENSGAGG00000001888PABPC48691.557ENSCHOG00000005327PABPC48191.557Choloepus_hoffmanni
ENSGAGG00000001888PABPC410099.048ENSCPBG00000001038PABPC410099.048Chrysemys_picta_bellii
ENSGAGG00000001888PABPC49991.626ENSCANG00000034177PABPC49991.626Colobus_angolensis_palliatus
ENSGAGG00000001888PABPC49989.228ENSCGRG00001018166Pabpc410088.661Cricetulus_griseus_chok1gshd
ENSGAGG00000001888PABPC49889.396ENSCGRG00000009777Pabpc410088.818Cricetulus_griseus_crigri
ENSGAGG00000001888PABPC49985.647ENSCSEG00000000130pabpc49986.278Cynoglossus_semilaevis
ENSGAGG00000001888PABPC49986.422ENSCVAG00000019246pabpc49987.061Cyprinodon_variegatus
ENSGAGG00000001888PABPC49988.517ENSDARG00000059259pabpc49989.073Danio_rerio
ENSGAGG00000001888PABPC49991.234ENSDNOG00000018444-9991.234Dasypus_novemcinctus
ENSGAGG00000001888PABPC410088.491ENSDORG00000011581Pabpc49988.491Dipodomys_ordii
ENSGAGG00000001888PABPC410095.312ENSETEG00000018453-8495.312Echinops_telfairi
ENSGAGG00000001888PABPC48759.890ENSETEG00000009172-9959.890Echinops_telfairi
ENSGAGG00000001888PABPC49779.321ENSEBUG00000013782pabpc49979.114Eptatretus_burgeri
ENSGAGG00000001888PABPC49978.185ENSEBUG00000000992pabpc49978.185Eptatretus_burgeri
ENSGAGG00000001888PABPC410087.709ENSEASG00005014119PABPC49987.709Equus_asinus_asinus
ENSGAGG00000001888PABPC410087.709ENSECAG00000009396PABPC49987.709Equus_caballus
ENSGAGG00000001888PABPC49885.781ENSEEUG00000002962PABPC49985.432Erinaceus_europaeus
ENSGAGG00000001888PABPC49986.688ENSELUG00000003195pabpc49987.107Esox_lucius
ENSGAGG00000001888PABPC410091.746ENSFCAG00000015254-9991.746Felis_catus
ENSGAGG00000001888PABPC410096.825ENSFALG00000000543PABPC410096.825Ficedula_albicollis
ENSGAGG00000001888PABPC49057.569ENSFDAG00000010581-10054.844Fukomys_damarensis
ENSGAGG00000001888PABPC410086.646ENSFDAG00000020016-9987.709Fukomys_damarensis
ENSGAGG00000001888PABPC410085.984ENSFHEG00000007548pabpc49986.614Fundulus_heteroclitus
ENSGAGG00000001888PABPC410084.434ENSGMOG00000019025pabpc49985.063Gadus_morhua
ENSGAGG00000001888PABPC410096.984ENSGALG00000003800PABPC410096.984Gallus_gallus
ENSGAGG00000001888PABPC49993.632ENSGAFG00000018195pabpc49897.222Gambusia_affinis
ENSGAGG00000001888PABPC49984.858ENSGACG00000007179pabpc49985.489Gasterosteus_aculeatus
ENSGAGG00000001888PABPC410091.587ENSGGOG00000004002PABPC49991.587Gorilla_gorilla
ENSGAGG00000001888PABPC410085.827ENSHBUG00000020206pabpc49986.457Haplochromis_burtoni
ENSGAGG00000001888PABPC410091.429ENSHGLG00000011162PABPC49991.429Heterocephalus_glaber_female
ENSGAGG00000001888PABPC410091.429ENSHGLG00100001580PABPC49991.429Heterocephalus_glaber_male
ENSGAGG00000001888PABPC49986.098ENSHCOG00000012694pabpc49986.730Hippocampus_comes
ENSGAGG00000001888PABPC49886.196ENSIPUG00000016620pabpc49986.299Ictalurus_punctatus
ENSGAGG00000001888PABPC410089.524ENSSTOG00000010416PABPC49989.524Ictidomys_tridecemlineatus
ENSGAGG00000001888PABPC410086.625ENSJJAG00000007781Pabpc49987.092Jaculus_jaculus
ENSGAGG00000001888PABPC410085.692ENSKMAG00000013597pabpc49986.321Kryptolebias_marmoratus
ENSGAGG00000001888PABPC410085.557ENSLBEG00000013654pabpc49986.185Labrus_bergylta
ENSGAGG00000001888PABPC410093.375ENSLACG00000011907PABPC410093.375Latimeria_chalumnae
ENSGAGG00000001888PABPC410089.498ENSLOCG00000001877pabpc410090.282Lepisosteus_oculatus
ENSGAGG00000001888PABPC410089.683ENSLAFG00000000151PABPC49989.683Loxodonta_africana
ENSGAGG00000001888PABPC410091.587ENSMFAG00000041481PABPC49991.587Macaca_fascicularis
ENSGAGG00000001888PABPC410087.557ENSMMUG00000007497PABPC49987.557Macaca_mulatta
ENSGAGG00000001888PABPC410091.429ENSMNEG00000043054PABPC49991.429Macaca_nemestrina
ENSGAGG00000001888PABPC410091.587ENSMLEG00000040716PABPC49991.587Mandrillus_leucophaeus
ENSGAGG00000001888PABPC49986.169ENSMAMG00000010025pabpc49986.457Mastacembelus_armatus
ENSGAGG00000001888PABPC410085.827ENSMZEG00005006141pabpc49986.457Maylandia_zebra
ENSGAGG00000001888PABPC49993.186ENSMGAG00000005408PABPC410093.186Meleagris_gallopavo
ENSGAGG00000001888PABPC47694.792ENSMAUG00000019763-8489.908Mesocricetus_auratus
ENSGAGG00000001888PABPC45782.635ENSMAUG00000004089-8982.635Mesocricetus_auratus
ENSGAGG00000001888PABPC47284.135ENSMAUG00000001295-9784.135Mesocricetus_auratus
ENSGAGG00000001888PABPC49978.292ENSMICG00000036729-9978.648Microcebus_murinus
ENSGAGG00000001888PABPC48989.286ENSMICG00000016633-10089.680Microcebus_murinus
ENSGAGG00000001888PABPC49991.680ENSMOCG00000006763Pabpc49991.111Microtus_ochrogaster
ENSGAGG00000001888PABPC410083.412ENSMMOG00000002363pabpc49984.543Mola_mola
ENSGAGG00000001888PABPC45974.133ENSMODG00000018051-9674.133Monodelphis_domestica
ENSGAGG00000001888PABPC410090.091ENSMODG00000017657-10090.091Monodelphis_domestica
ENSGAGG00000001888PABPC49985.737ENSMALG00000011017pabpc49985.714Monopterus_albus
ENSGAGG00000001888PABPC49976.348MGP_CAROLIEiJ_G0024864-9976.348Mus_caroli
ENSGAGG00000001888PABPC410085.888MGP_CAROLIEiJ_G0026435-10097.872Mus_caroli
ENSGAGG00000001888PABPC410090.794ENSMUSG00000011257Pabpc410096.429Mus_musculus
ENSGAGG00000001888PABPC49986.308MGP_PahariEiJ_G0028765Pabpc410098.582Mus_pahari
ENSGAGG00000001888PABPC49971.611MGP_SPRETEiJ_G0027415Pabpc410097.872Mus_spretus
ENSGAGG00000001888PABPC49549.834ENSMPUG00000006836-10049.834Mustela_putorius_furo
ENSGAGG00000001888PABPC410086.646ENSMPUG00000014414-9987.709Mustela_putorius_furo
ENSGAGG00000001888PABPC410089.841ENSMLUG00000012068PABPC49989.841Myotis_lucifugus
ENSGAGG00000001888PABPC410089.524ENSNGAG00000018292Pabpc49989.524Nannospalax_galili
ENSGAGG00000001888PABPC46691.667ENSNBRG00000010047-7291.667Neolamprologus_brichardi
ENSGAGG00000001888PABPC46097.115ENSNBRG00000009708pabpc49897.115Neolamprologus_brichardi
ENSGAGG00000001888PABPC410091.587ENSNLEG00000011928PABPC49991.587Nomascus_leucogenys
ENSGAGG00000001888PABPC48593.263ENSOPRG00000011984PABPC48793.263Ochotona_princeps
ENSGAGG00000001888PABPC410091.111ENSODEG00000006592-9991.111Octodon_degus
ENSGAGG00000001888PABPC49981.607ENSODEG00000017434-9981.818Octodon_degus
ENSGAGG00000001888PABPC45384.286ENSODEG00000013457-10084.286Octodon_degus
ENSGAGG00000001888PABPC410085.827ENSONIG00000008176pabpc49986.457Oreochromis_niloticus
ENSGAGG00000001888PABPC410096.667ENSOANG00000010001PABPC410096.667Ornithorhynchus_anatinus
ENSGAGG00000001888PABPC49687.500ENSOCUG00000000562PABPC48887.500Oryctolagus_cuniculus
ENSGAGG00000001888PABPC49993.519ENSORLG00000017479pabpc49993.519Oryzias_latipes
ENSGAGG00000001888PABPC49993.519ENSORLG00020018644pabpc49993.519Oryzias_latipes_hni
ENSGAGG00000001888PABPC49993.519ENSORLG00015015042pabpc49993.519Oryzias_latipes_hsok
ENSGAGG00000001888PABPC49986.146ENSOMEG00000014410pabpc49986.164Oryzias_melastigma
ENSGAGG00000001888PABPC410087.461ENSOGAG00000004067PABPC49988.235Otolemur_garnettii
ENSGAGG00000001888PABPC410087.709ENSOARG00000020060PABPC49987.709Ovis_aries
ENSGAGG00000001888PABPC410091.587ENSPPAG00000043625PABPC49991.587Pan_paniscus
ENSGAGG00000001888PABPC410091.746ENSPPRG00000024727PABPC49991.746Panthera_pardus
ENSGAGG00000001888PABPC410091.746ENSPTIG00000005829PABPC49991.746Panthera_tigris_altaica
ENSGAGG00000001888PABPC410091.587ENSPTRG00000000573PABPC49991.587Pan_troglodytes
ENSGAGG00000001888PABPC410091.746ENSPANG00000009484PABPC49991.746Papio_anubis
ENSGAGG00000001888PABPC49988.170ENSPKIG00000025356pabpc49988.801Paramormyrops_kingsleyae
ENSGAGG00000001888PABPC410099.048ENSPSIG00000016892PABPC410099.048Pelodiscus_sinensis
ENSGAGG00000001888PABPC410083.596ENSPMGG00000009073pabpc49983.596Periophthalmus_magnuspinnatus
ENSGAGG00000001888PABPC49985.759ENSPEMG00000024193-9985.759Peromyscus_maniculatus_bairdii
ENSGAGG00000001888PABPC410090.794ENSPEMG00000023569-9990.794Peromyscus_maniculatus_bairdii
ENSGAGG00000001888PABPC48975.910ENSPMAG00000002836pabpc410077.123Petromyzon_marinus
ENSGAGG00000001888PABPC49772.393ENSPMAG00000007885pabpc49972.366Petromyzon_marinus
ENSGAGG00000001888PABPC49997.852ENSPCIG00000020674PABPC410097.852Phascolarctos_cinereus
ENSGAGG00000001888PABPC410085.039ENSPFOG00000002682pabpc49986.299Poecilia_formosa
ENSGAGG00000001888PABPC410085.197ENSPLAG00000010112pabpc49986.457Poecilia_latipinna
ENSGAGG00000001888PABPC49985.692ENSPMEG00000019739pabpc49986.299Poecilia_mexicana
ENSGAGG00000001888PABPC410085.984ENSPREG00000001589pabpc49986.614Poecilia_reticulata
ENSGAGG00000001888PABPC410087.557ENSPPYG00000001506PABPC49987.557Pongo_abelii
ENSGAGG00000001888PABPC410083.005ENSPCAG00000003341PABPC49983.005Procavia_capensis
ENSGAGG00000001888PABPC410090.808ENSPCOG00000023725-9991.442Propithecus_coquereli
ENSGAGG00000001888PABPC49972.504ENSPCOG00000025882-9973.380Propithecus_coquereli
ENSGAGG00000001888PABPC49986.869ENSPVAG00000002187PABPC49986.869Pteropus_vampyrus
ENSGAGG00000001888PABPC410085.984ENSPNYG00000006134pabpc49986.614Pundamilia_nyererei
ENSGAGG00000001888PABPC49986.772ENSPNAG00000024355pabpc49987.402Pygocentrus_nattereri
ENSGAGG00000001888PABPC410088.025ENSRNOG00000015642Pabpc49988.025Rattus_norvegicus
ENSGAGG00000001888PABPC410085.848ENSRNOG00000028592AABR07035074.19985.848Rattus_norvegicus
ENSGAGG00000001888PABPC410091.587ENSRBIG00000039761PABPC49991.587Rhinopithecus_bieti
ENSGAGG00000001888PABPC410091.587ENSRROG00000033355PABPC49991.587Rhinopithecus_roxellana
ENSGAGG00000001888PABPC410091.587ENSSBOG00000026193PABPC49991.587Saimiri_boliviensis_boliviensis
ENSGAGG00000001888PABPC410093.968ENSSHAG00000018139PABPC410093.968Sarcophilus_harrisii
ENSGAGG00000001888PABPC49989.145ENSSFOG00015023514pabpc49989.145Scleropages_formosus
ENSGAGG00000001888PABPC49985.759ENSSMAG00000009007pabpc49986.392Scophthalmus_maximus
ENSGAGG00000001888PABPC49986.486ENSSDUG00000012683pabpc49986.457Seriola_dumerili
ENSGAGG00000001888PABPC49986.486ENSSLDG00000013025pabpc49986.457Seriola_lalandi_dorsalis
ENSGAGG00000001888PABPC410080.880ENSSARG00000000310PABPC49980.880Sorex_araneus
ENSGAGG00000001888PABPC410096.190ENSSPUG00000003204PABPC410096.190Sphenodon_punctatus
ENSGAGG00000001888PABPC49986.486ENSSPAG00000009252pabpc49986.457Stegastes_partitus
ENSGAGG00000001888PABPC48946.195ENSSSCG00000036170-9646.549Sus_scrofa
ENSGAGG00000001888PABPC410091.746ENSSSCG00000003660-9991.746Sus_scrofa
ENSGAGG00000001888PABPC410092.436ENSTGUG00000001266PABPC410092.436Taeniopygia_guttata
ENSGAGG00000001888PABPC49985.918ENSTRUG00000005907pabpc49986.551Takifugu_rubripes
ENSGAGG00000001888PABPC49981.847ENSTNIG00000016902pabpc49981.847Tetraodon_nigroviridis
ENSGAGG00000001888PABPC49977.104ENSTBEG00000009035PABPC49977.104Tupaia_belangeri
ENSGAGG00000001888PABPC49966.132ENSTTRG00000014340PABPC49975.758Tursiops_truncatus
ENSGAGG00000001888PABPC410091.746ENSUAMG00000000303PABPC49991.746Ursus_americanus
ENSGAGG00000001888PABPC410091.667ENSUMAG00000019585PABPC49991.667Ursus_maritimus
ENSGAGG00000001888PABPC47972.861ENSVPAG00000010041PABPC47372.861Vicugna_pacos
ENSGAGG00000001888PABPC410091.746ENSVVUG00000005215PABPC49991.746Vulpes_vulpes
ENSGAGG00000001888PABPC410087.619ENSXETG00000010946pabpc410087.619Xenopus_tropicalis
ENSGAGG00000001888PABPC46198.810ENSXETG00000027221-10098.810Xenopus_tropicalis
ENSGAGG00000001888PABPC49992.208ENSXCOG00000013190pabpc49693.396Xiphophorus_couchianus
ENSGAGG00000001888PABPC410085.827ENSXMAG00000019007pabpc49986.457Xiphophorus_maculatus

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