EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000002214 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 17415 bases
Position: chrPPEB01004489.1:125721-143135
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	1	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	2	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	3	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	4	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	5	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	6	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	7	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	8	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	9	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	10	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	11	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	12	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	13	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	14	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	15	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	16	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	17	18
ENSGAGP00000002775	zf-C2H2	PF00096.26	2.8e-123	18	18
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	1	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	2	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	3	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	4	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	5	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	6	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	7	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	8	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	9	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	10	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	11	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	12	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	13	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	14	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	15	16
ENSGAGP00000002807	zf-C2H2	PF00096.26	1.9e-111	16	16
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	1	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	2	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	3	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	4	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	5	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	6	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	7	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	8	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	9	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	10	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	11	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	12	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	13	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	14	15
ENSGAGP00000002767	zf-C2H2	PF00096.26	1.5e-105	15	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	1	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	2	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	3	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	4	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	5	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	6	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	7	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	8	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	9	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	10	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	11	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	12	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	13	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	14	15
ENSGAGP00000002816	zf-C2H2	PF00096.26	4.3e-104	15	15
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	1	14
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	2	14
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	3	14
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	4	14
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	5	14
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	6	14
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	7	14
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	8	14
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	9	14
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	10	14
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	11	14
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	12	14
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	13	14
ENSGAGP00000002842	zf-C2H2	PF00096.26	7.1e-100	14	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	1	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	2	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	3	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	4	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	5	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	6	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	7	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	8	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	9	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	10	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	11	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	12	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	13	14
ENSGAGP00000002835	zf-C2H2	PF00096.26	9.7e-93	14	14
ENSGAGP00000002767	zf-met	PF12874.7	8.3e-17	1	2
ENSGAGP00000002767	zf-met	PF12874.7	8.3e-17	2	2
ENSGAGP00000002775	zf-met	PF12874.7	2.1e-16	1	1
ENSGAGP00000002835	zf-met	PF12874.7	9.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000003210	-	1761	-	ENSGAGP00000002807	586 (aa)	-	-
ENSGAGT00000003220	-	1665	-	ENSGAGP00000002816	554 (aa)	-	-
ENSGAGT00000003166	-	1560	-	ENSGAGP00000002767	519 (aa)	-	-
ENSGAGT00000003250	-	1569	-	ENSGAGP00000002842	522 (aa)	-	-
ENSGAGT00000003241	-	1590	-	ENSGAGP00000002835	529 (aa)	-	-
ENSGAGT00000003175	-	1944	-	ENSGAGP00000002775	647 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000002214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000002214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000002214	-	98	85.034	ENSGAGG00000002179	-	92	85.034
ENSGAGG00000002214	-	99	64.333	ENSGAGG00000011487	-	99	63.607
ENSGAGG00000002214	-	82	33.761	ENSGAGG00000019591	ZNF770	98	33.766
ENSGAGG00000002214	-	96	60.223	ENSGAGG00000015451	-	98	59.259
ENSGAGG00000002214	-	84	58.246	ENSGAGG00000020168	-	76	58.246
ENSGAGG00000002214	-	93	48.387	ENSGAGG00000013586	ZBTB24	51	47.809
ENSGAGG00000002214	-	82	53.125	ENSGAGG00000004926	-	96	53.646
ENSGAGG00000002214	-	99	64.567	ENSGAGG00000009272	-	99	64.052
ENSGAGG00000002214	-	93	68.571	ENSGAGG00000004740	-	95	70.286
ENSGAGG00000002214	-	96	58.879	ENSGAGG00000013851	-	94	61.935
ENSGAGG00000002214	-	90	62.456	ENSGAGG00000011574	-	96	62.456
ENSGAGG00000002214	-	87	57.297	ENSGAGG00000015232	-	93	56.923
ENSGAGG00000002214	-	94	56.812	ENSGAGG00000001387	-	76	56.812
ENSGAGG00000002214	-	91	65.934	ENSGAGG00000002828	-	82	65.934
ENSGAGG00000002214	-	100	66.406	ENSGAGG00000010833	-	98	64.608
ENSGAGG00000002214	-	93	63.250	ENSGAGG00000014389	-	98	63.740
ENSGAGG00000002214	-	96	54.656	ENSGAGG00000018885	-	84	54.656
ENSGAGG00000002214	-	99	67.732	ENSGAGG00000006683	-	95	70.060
ENSGAGG00000002214	-	85	69.822	ENSGAGG00000010492	-	85	69.822
ENSGAGG00000002214	-	86	55.180	ENSGAGG00000011366	-	99	55.180
ENSGAGG00000002214	-	97	58.421	ENSGAGG00000006848	-	74	58.421
ENSGAGG00000002214	-	96	66.812	ENSGAGG00000012452	-	98	66.812
ENSGAGG00000002214	-	86	33.333	ENSGAGG00000020362	PRDM5	81	32.923
ENSGAGG00000002214	-	99	60.938	ENSGAGG00000020134	-	98	60.680
ENSGAGG00000002214	-	91	65.809	ENSGAGG00000017986	-	96	65.060
ENSGAGG00000002214	-	82	59.336	ENSGAGG00000011399	-	84	59.821
ENSGAGG00000002214	-	88	65.653	ENSGAGG00000001469	-	98	65.455
ENSGAGG00000002214	-	99	61.832	ENSGAGG00000014356	-	97	61.592
ENSGAGG00000002214	-	87	50.718	ENSGAGG00000005331	-	92	51.415
ENSGAGG00000002214	-	87	64.474	ENSGAGG00000009739	-	99	65.354
ENSGAGG00000002214	-	91	54.797	ENSGAGG00000006846	-	97	54.797
ENSGAGG00000002214	-	86	63.701	ENSGAGG00000007230	-	91	64.453
ENSGAGG00000002214	-	86	61.935	ENSGAGG00000016529	-	91	61.935
ENSGAGG00000002214	-	99	64.946	ENSGAGG00000020594	-	95	74.468
ENSGAGG00000002214	-	81	61.217	ENSGAGG00000000971	-	94	61.217
ENSGAGG00000002214	-	99	63.347	ENSGAGG00000001645	-	93	63.347
ENSGAGG00000002214	-	82	52.381	ENSGAGG00000013021	-	95	52.976
ENSGAGG00000002214	-	82	47.403	ENSGAGG00000017094	-	52	47.811
ENSGAGG00000002214	-	90	60.163	ENSGAGG00000018445	-	98	59.839
ENSGAGG00000002214	-	99	65.330	ENSGAGG00000008773	-	96	63.564
ENSGAGG00000002214	-	94	57.463	ENSGAGG00000017640	-	92	57.463
ENSGAGG00000002214	-	95	40.972	ENSGAGG00000003883	ZNF236	68	46.667
ENSGAGG00000002214	-	99	62.278	ENSGAGG00000019349	-	99	62.278
ENSGAGG00000002214	-	96	81.633	ENSGAGG00000010324	-	93	66.786
ENSGAGG00000002214	-	87	41.353	ENSGAGG00000022571	ZNF319	93	42.318
ENSGAGG00000002214	-	80	39.815	ENSGAGG00000003095	ZNF865	87	39.815
ENSGAGG00000002214	-	98	63.241	ENSGAGG00000006960	-	100	63.501
ENSGAGG00000002214	-	82	32.821	ENSGAGG00000022082	PRDM15	54	32.821
ENSGAGG00000002214	-	99	63.348	ENSGAGG00000006323	-	94	66.353
ENSGAGG00000002214	-	89	63.306	ENSGAGG00000005805	-	99	63.514
ENSGAGG00000002214	-	83	37.358	ENSGAGG00000025218	ZBTB41	52	34.637

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000002214	-	81	65.217	ENSAMXG00000029161	-	88	65.217	Astyanax_mexicanus
ENSGAGG00000002214	-	99	66.000	ENSCPBG00000012976	-	99	63.158	Chrysemys_picta_bellii
ENSGAGG00000002214	-	99	66.436	ENSCPBG00000016841	-	99	66.341	Chrysemys_picta_bellii
ENSGAGG00000002214	-	98	68.992	ENSCPBG00000001272	-	98	68.992	Chrysemys_picta_bellii
ENSGAGG00000002214	-	100	64.033	ENSCPBG00000021479	-	98	65.726	Chrysemys_picta_bellii
ENSGAGG00000002214	-	99	90.047	ENSCPBG00000004990	-	99	90.047	Chrysemys_picta_bellii
ENSGAGG00000002214	-	90	81.471	ENSCPBG00000001421	-	94	75.529	Chrysemys_picta_bellii
ENSGAGG00000002214	-	99	63.158	ENSCPBG00000021487	-	93	63.158	Chrysemys_picta_bellii
ENSGAGG00000002214	-	100	65.882	ENSCPBG00000004030	-	99	65.882	Chrysemys_picta_bellii
ENSGAGG00000002214	-	87	59.135	ENSPSIG00000000522	-	100	59.135	Pelodiscus_sinensis
ENSGAGG00000002214	-	99	85.185	ENSPSIG00000012865	-	97	88.095	Pelodiscus_sinensis
ENSGAGG00000002214	-	89	63.877	ENSPSIG00000015216	-	98	63.877	Pelodiscus_sinensis
ENSGAGG00000002214	-	98	66.816	ENSPSIG00000009893	-	99	66.816	Pelodiscus_sinensis
ENSGAGG00000002214	-	100	59.559	ENSPSIG00000015465	-	98	60.819	Pelodiscus_sinensis
ENSGAGG00000002214	-	88	63.798	ENSPSIG00000001026	-	93	61.728	Pelodiscus_sinensis
ENSGAGG00000002214	-	91	66.415	ENSPSIG00000002569	-	95	66.415	Pelodiscus_sinensis
ENSGAGG00000002214	-	82	61.818	ENSTGUG00000016516	-	99	61.818	Taeniopygia_guttata
ENSGAGG00000002214	-	81	62.500	ENSTGUG00000018518	-	100	62.500	Taeniopygia_guttata
ENSGAGG00000002214	-	81	65.476	ENSTGUG00000018542	-	100	65.476	Taeniopygia_guttata
ENSGAGG00000002214	-	85	61.421	ENSTGUG00000018445	-	95	61.421	Taeniopygia_guttata
ENSGAGG00000002214	-	81	66.443	ENSTGUG00000018327	-	100	66.443	Taeniopygia_guttata
ENSGAGG00000002214	-	81	63.819	ENSTGUG00000014888	-	99	63.819	Taeniopygia_guttata
ENSGAGG00000002214	-	81	61.569	ENSTGUG00000016781	-	99	60.223	Taeniopygia_guttata
ENSGAGG00000002214	-	81	62.810	ENSTGUG00000016850	-	99	62.810	Taeniopygia_guttata
ENSGAGG00000002214	-	82	62.000	ENSTGUG00000013736	-	99	62.944	Taeniopygia_guttata
ENSGAGG00000002214	-	81	58.730	ENSTGUG00000015260	-	100	58.730	Taeniopygia_guttata
ENSGAGG00000002214	-	82	66.667	ENSTGUG00000018349	-	100	66.667	Taeniopygia_guttata
ENSGAGG00000002214	-	82	62.500	ENSTGUG00000018374	-	99	62.500	Taeniopygia_guttata
ENSGAGG00000002214	-	82	61.157	ENSTGUG00000014614	-	100	61.307	Taeniopygia_guttata