EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000002297 (Gene tree)
Gene ID: -
Gene Symbol: SALL4
Alias: ZNF797|dJ1112F19.1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 21096 bases
Position: chrPPEB01000007.1:21499-42594
Accession: 15924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000002882	zf-C2H2	PF00096.26	1.7e-27	1	6
ENSGAGP00000002882	zf-C2H2	PF00096.26	1.7e-27	2	6
ENSGAGP00000002882	zf-C2H2	PF00096.26	1.7e-27	3	6
ENSGAGP00000002882	zf-C2H2	PF00096.26	1.7e-27	4	6
ENSGAGP00000002882	zf-C2H2	PF00096.26	1.7e-27	5	6
ENSGAGP00000002882	zf-C2H2	PF00096.26	1.7e-27	6	6
ENSGAGP00000002882	zf-met	PF12874.7	8.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000003299	SALL4-201	3330	-	ENSGAGP00000002882	1109 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000002297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000002297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000002297	SALL4	100	63.462	ENSGAGG00000013979	SALL1	89	63.462
ENSGAGG00000002297	SALL4	98	63.462	ENSGAGG00000000925	SALL3	91	63.462
ENSGAGG00000002297	SALL4	58	44.000	ENSGAGG00000019591	ZNF770	83	44.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000002297	SALL4	100	57.293	ENSG00000101115	SALL4	100	67.901	Homo_sapiens
ENSGAGG00000002297	SALL4	100	51.642	ENSAPOG00000002465	sall4	99	51.423	Acanthochromis_polyacanthus
ENSGAGG00000002297	SALL4	100	57.143	ENSAMEG00000013250	-	99	59.154	Ailuropoda_melanoleuca
ENSGAGG00000002297	SALL4	99	51.230	ENSACIG00000017298	sall4	99	51.011	Amphilophus_citrinellus
ENSGAGG00000002297	SALL4	100	52.524	ENSAOCG00000023678	sall4	99	52.529	Amphiprion_ocellaris
ENSGAGG00000002297	SALL4	100	52.436	ENSAPEG00000000751	sall4	99	52.440	Amphiprion_percula
ENSGAGG00000002297	SALL4	99	52.116	ENSATEG00000024480	sall4	99	51.947	Anabas_testudineus
ENSGAGG00000002297	SALL4	100	87.939	ENSAPLG00000006498	SALL4	100	87.939	Anas_platyrhynchos
ENSGAGG00000002297	SALL4	100	74.515	ENSACAG00000012748	SALL4	99	74.581	Anolis_carolinensis
ENSGAGG00000002297	SALL4	100	56.918	ENSANAG00000023352	SALL4	100	56.629	Aotus_nancymaae
ENSGAGG00000002297	SALL4	99	52.212	ENSACLG00000017851	sall4	99	52.220	Astatotilapia_calliptera
ENSGAGG00000002297	SALL4	99	54.656	ENSAMXG00000001254	sall4	52	57.094	Astyanax_mexicanus
ENSGAGG00000002297	SALL4	100	53.229	ENSBTAG00000003101	SALL4	100	53.322	Bos_taurus
ENSGAGG00000002297	SALL4	83	59.372	ENSCJAG00000000591	SALL4	99	58.722	Callithrix_jacchus
ENSGAGG00000002297	SALL4	100	58.282	ENSCAFG00000011738	-	100	58.195	Canis_familiaris
ENSGAGG00000002297	SALL4	100	58.195	ENSCAFG00020021870	SALL4	100	58.195	Canis_lupus_dingo
ENSGAGG00000002297	SALL4	100	53.438	ENSCHIG00000026270	SALL4	100	53.624	Capra_hircus
ENSGAGG00000002297	SALL4	100	55.127	ENSTSYG00000007359	SALL4	100	68.313	Carlito_syrichta
ENSGAGG00000002297	SALL4	99	53.963	ENSCAPG00000012135	SALL4	98	53.606	Cavia_aperea
ENSGAGG00000002297	SALL4	100	53.158	ENSCCAG00000029512	-	100	64.706	Cebus_capucinus
ENSGAGG00000002297	SALL4	100	57.594	ENSCATG00000030757	SALL4	100	57.243	Cercocebus_atys
ENSGAGG00000002297	SALL4	100	55.215	ENSCLAG00000010479	SALL4	100	55.565	Chinchilla_lanigera
ENSGAGG00000002297	SALL4	100	57.331	ENSCSAG00000015269	SALL4	100	56.980	Chlorocebus_sabaeus
ENSGAGG00000002297	SALL4	100	97.746	ENSCPBG00000014995	SALL4	100	97.763	Chrysemys_picta_bellii
ENSGAGG00000002297	SALL4	100	56.854	ENSCANG00000036463	SALL4	100	56.980	Colobus_angolensis_palliatus
ENSGAGG00000002297	SALL4	100	52.269	ENSCGRG00001019569	Sall4	100	57.959	Cricetulus_griseus_chok1gshd
ENSGAGG00000002297	SALL4	100	52.182	ENSCGRG00000000462	Sall4	98	77.778	Cricetulus_griseus_crigri
ENSGAGG00000002297	SALL4	99	50.571	ENSCSEG00000014604	sall4	99	50.965	Cynoglossus_semilaevis
ENSGAGG00000002297	SALL4	100	50.787	ENSCVAG00000010815	sall4	99	51.049	Cyprinodon_variegatus
ENSGAGG00000002297	SALL4	99	54.156	ENSDARG00000044485	sall4	99	53.718	Danio_rerio
ENSGAGG00000002297	SALL4	100	56.930	ENSDNOG00000040633	SALL4	100	56.968	Dasypus_novemcinctus
ENSGAGG00000002297	SALL4	100	50.310	ENSDORG00000012841	Sall4	100	82.143	Dipodomys_ordii
ENSGAGG00000002297	SALL4	70	68.000	ENSETEG00000012475	-	64	68.000	Echinops_telfairi
ENSGAGG00000002297	SALL4	59	61.538	ENSEBUG00000015425	-	50	61.538	Eptatretus_burgeri
ENSGAGG00000002297	SALL4	100	57.655	ENSECAG00000018533	SALL4	100	57.807	Equus_caballus
ENSGAGG00000002297	SALL4	100	55.867	ENSEEUG00000003649	SALL4	99	56.113	Erinaceus_europaeus
ENSGAGG00000002297	SALL4	99	51.928	ENSELUG00000005696	sall4	99	51.561	Esox_lucius
ENSGAGG00000002297	SALL4	100	55.236	ENSFCAG00000002822	SALL4	100	54.760	Felis_catus
ENSGAGG00000002297	SALL4	100	81.745	ENSFALG00000013149	SALL4	100	81.835	Ficedula_albicollis
ENSGAGG00000002297	SALL4	100	55.448	ENSFDAG00000017812	SALL4	100	55.556	Fukomys_damarensis
ENSGAGG00000002297	SALL4	99	52.406	ENSFHEG00000014187	sall4	99	52.277	Fundulus_heteroclitus
ENSGAGG00000002297	SALL4	99	51.150	ENSGMOG00000003822	sall4	99	51.327	Gadus_morhua
ENSGAGG00000002297	SALL4	100	84.518	ENSGALG00000041365	SALL4	100	84.968	Gallus_gallus
ENSGAGG00000002297	SALL4	100	51.144	ENSGAFG00000019925	sall4	99	51.451	Gambusia_affinis
ENSGAGG00000002297	SALL4	99	50.618	ENSGACG00000011124	sall4	99	50.840	Gasterosteus_aculeatus
ENSGAGG00000002297	SALL4	100	57.206	ENSGGOG00000001832	SALL4	100	57.419	Gorilla_gorilla
ENSGAGG00000002297	SALL4	99	52.212	ENSHBUG00000007327	sall4	99	51.993	Haplochromis_burtoni
ENSGAGG00000002297	SALL4	98	55.515	ENSHGLG00000009043	SALL4	97	55.333	Heterocephalus_glaber_female
ENSGAGG00000002297	SALL4	98	55.424	ENSHGLG00100002722	SALL4	97	55.242	Heterocephalus_glaber_male
ENSGAGG00000002297	SALL4	99	51.550	ENSHCOG00000008519	sall4	99	51.550	Hippocampus_comes
ENSGAGG00000002297	SALL4	99	56.134	ENSIPUG00000019170	sall4	99	56.311	Ictalurus_punctatus
ENSGAGG00000002297	SALL4	64	64.490	ENSSTOG00000025002	SALL4	98	85.915	Ictidomys_tridecemlineatus
ENSGAGG00000002297	SALL4	100	56.518	ENSJJAG00000020688	Sall4	98	87.324	Jaculus_jaculus
ENSGAGG00000002297	SALL4	99	52.473	ENSKMAG00000002501	sall4	99	52.343	Kryptolebias_marmoratus
ENSGAGG00000002297	SALL4	100	51.370	ENSLBEG00000019951	sall4	99	51.416	Labrus_bergylta
ENSGAGG00000002297	SALL4	96	60.793	ENSLACG00000013898	SALL4	100	70.899	Latimeria_chalumnae
ENSGAGG00000002297	SALL4	100	58.547	ENSLOCG00000002427	sall4	100	58.813	Lepisosteus_oculatus
ENSGAGG00000002297	SALL4	100	56.702	ENSLAFG00000004309	SALL4	100	56.503	Loxodonta_africana
ENSGAGG00000002297	SALL4	100	57.419	ENSMFAG00000027169	SALL4	100	57.068	Macaca_fascicularis
ENSGAGG00000002297	SALL4	93	57.859	ENSMMUG00000003870	SALL4	100	66.667	Macaca_mulatta
ENSGAGG00000002297	SALL4	93	57.859	ENSMNEG00000035995	SALL4	100	57.377	Macaca_nemestrina
ENSGAGG00000002297	SALL4	100	57.419	ENSMLEG00000030467	SALL4	100	57.068	Mandrillus_leucophaeus
ENSGAGG00000002297	SALL4	99	51.820	ENSMAMG00000005223	sall4	99	51.520	Mastacembelus_armatus
ENSGAGG00000002297	SALL4	99	52.212	ENSMZEG00005023418	sall4	99	52.220	Maylandia_zebra
ENSGAGG00000002297	SALL4	76	82.930	ENSMGAG00000009344	SALL4	100	83.567	Meleagris_gallopavo
ENSGAGG00000002297	SALL4	100	52.426	ENSMAUG00000015814	Sall4	98	74.699	Mesocricetus_auratus
ENSGAGG00000002297	SALL4	100	56.842	ENSMICG00000000027	SALL4	100	56.640	Microcebus_murinus
ENSGAGG00000002297	SALL4	100	53.993	ENSMOCG00000018245	Sall4	98	84.932	Microtus_ochrogaster
ENSGAGG00000002297	SALL4	99	52.436	ENSMMOG00000014929	sall4	99	52.259	Mola_mola
ENSGAGG00000002297	SALL4	100	71.815	ENSMODG00000016387	SALL4	97	71.815	Monodelphis_domestica
ENSGAGG00000002297	SALL4	99	51.975	ENSMALG00000018709	sall4	99	52.202	Monopterus_albus
ENSGAGG00000002297	SALL4	100	52.261	MGP_CAROLIEiJ_G0024723	Sall4	98	87.500	Mus_caroli
ENSGAGG00000002297	SALL4	100	52.604	ENSMUSG00000027547	Sall4	98	87.500	Mus_musculus
ENSGAGG00000002297	SALL4	100	51.763	MGP_PahariEiJ_G0026164	Sall4	98	87.500	Mus_pahari
ENSGAGG00000002297	SALL4	100	52.389	MGP_SPRETEiJ_G0025643	Sall4	98	87.500	Mus_spretus
ENSGAGG00000002297	SALL4	100	56.856	ENSMPUG00000017543	SALL4	96	56.818	Mustela_putorius_furo
ENSGAGG00000002297	SALL4	100	53.441	ENSMLUG00000008405	-	100	53.083	Myotis_lucifugus
ENSGAGG00000002297	SALL4	99	42.921	ENSMLUG00000028073	-	99	42.384	Myotis_lucifugus
ENSGAGG00000002297	SALL4	98	57.573	ENSMLUG00000007060	-	100	57.299	Myotis_lucifugus
ENSGAGG00000002297	SALL4	100	55.546	ENSNGAG00000017833	Sall4	100	55.312	Nannospalax_galili
ENSGAGG00000002297	SALL4	99	52.343	ENSNBRG00000001829	sall4	99	52.028	Neolamprologus_brichardi
ENSGAGG00000002297	SALL4	100	56.766	ENSNLEG00000007013	SALL4	100	56.980	Nomascus_leucogenys
ENSGAGG00000002297	SALL4	86	67.405	ENSMEUG00000005793	-	99	66.667	Notamacropus_eugenii
ENSGAGG00000002297	SALL4	100	56.457	ENSOPRG00000011640	SALL4	100	56.108	Ochotona_princeps
ENSGAGG00000002297	SALL4	100	52.251	ENSONIG00000016557	sall4	99	52.863	Oreochromis_niloticus
ENSGAGG00000002297	SALL4	100	77.718	ENSOANG00000008667	SALL4	97	77.986	Ornithorhynchus_anatinus
ENSGAGG00000002297	SALL4	98	57.169	ENSOCUG00000011797	SALL4	100	56.947	Oryctolagus_cuniculus
ENSGAGG00000002297	SALL4	99	51.068	ENSORLG00000016130	sall4	99	50.352	Oryzias_latipes
ENSGAGG00000002297	SALL4	99	50.352	ENSORLG00020007339	sall4	99	50.440	Oryzias_latipes_hni
ENSGAGG00000002297	SALL4	99	50.794	ENSORLG00015002265	sall4	99	50.616	Oryzias_latipes_hsok
ENSGAGG00000002297	SALL4	99	51.192	ENSOMEG00000017344	sall4	99	50.000	Oryzias_melastigma
ENSGAGG00000002297	SALL4	97	59.630	ENSOGAG00000013799	SALL4	100	59.167	Otolemur_garnettii
ENSGAGG00000002297	SALL4	100	51.539	ENSOARG00000014570	SALL4	100	51.363	Ovis_aries
ENSGAGG00000002297	SALL4	100	57.682	ENSPPAG00000038064	SALL4	100	57.331	Pan_paniscus
ENSGAGG00000002297	SALL4	100	55.993	ENSPPRG00000008677	SALL4	100	55.517	Panthera_pardus
ENSGAGG00000002297	SALL4	100	57.118	ENSPTRG00000013631	SALL4	100	57.507	Pan_troglodytes
ENSGAGG00000002297	SALL4	93	57.859	ENSPANG00000021792	SALL4	100	57.377	Papio_anubis
ENSGAGG00000002297	SALL4	99	55.818	ENSPKIG00000007074	sall4	99	55.818	Paramormyrops_kingsleyae
ENSGAGG00000002297	SALL4	100	93.874	ENSPSIG00000009066	SALL4	100	93.874	Pelodiscus_sinensis
ENSGAGG00000002297	SALL4	99	50.621	ENSPMGG00000022551	sall4	99	50.399	Periophthalmus_magnuspinnatus
ENSGAGG00000002297	SALL4	100	54.783	ENSPEMG00000022706	Sall4	98	87.500	Peromyscus_maniculatus_bairdii
ENSGAGG00000002297	SALL4	100	74.520	ENSPCIG00000022838	SALL4	97	74.520	Phascolarctos_cinereus
ENSGAGG00000002297	SALL4	100	51.888	ENSPFOG00000001442	sall4	99	51.852	Poecilia_formosa
ENSGAGG00000002297	SALL4	100	51.800	ENSPLAG00000008760	sall4	99	51.764	Poecilia_latipinna
ENSGAGG00000002297	SALL4	100	51.800	ENSPMEG00000008497	sall4	99	51.764	Poecilia_mexicana
ENSGAGG00000002297	SALL4	100	51.800	ENSPREG00000021140	sall4	100	51.718	Poecilia_reticulata
ENSGAGG00000002297	SALL4	100	57.331	ENSPPYG00000011138	SALL4	100	56.980	Pongo_abelii
ENSGAGG00000002297	SALL4	100	52.900	ENSPCAG00000004726	SALL4	99	53.596	Procavia_capensis
ENSGAGG00000002297	SALL4	100	56.868	ENSPCOG00000016321	SALL4	100	56.942	Propithecus_coquereli
ENSGAGG00000002297	SALL4	94	55.587	ENSPVAG00000002075	SALL4	94	55.690	Pteropus_vampyrus
ENSGAGG00000002297	SALL4	99	52.035	ENSPNYG00000021738	sall4	99	51.816	Pundamilia_nyererei
ENSGAGG00000002297	SALL4	99	56.916	ENSPNAG00000020929	sall4	99	56.828	Pygocentrus_nattereri
ENSGAGG00000002297	SALL4	100	52.509	ENSRNOG00000050035	Sall4	100	63.462	Rattus_norvegicus
ENSGAGG00000002297	SALL4	100	57.331	ENSRBIG00000039876	SALL4	100	57.184	Rhinopithecus_bieti
ENSGAGG00000002297	SALL4	100	57.331	ENSRROG00000036585	SALL4	100	56.892	Rhinopithecus_roxellana
ENSGAGG00000002297	SALL4	100	57.469	ENSSBOG00000030011	SALL4	100	57.243	Saimiri_boliviensis_boliviensis
ENSGAGG00000002297	SALL4	96	82.710	ENSSHAG00000018013	SALL4	89	82.710	Sarcophilus_harrisii
ENSGAGG00000002297	SALL4	99	54.111	ENSSFOG00015021075	sall4	99	54.111	Scleropages_formosus
ENSGAGG00000002297	SALL4	99	52.239	ENSSMAG00000019218	sall4	99	52.281	Scophthalmus_maximus
ENSGAGG00000002297	SALL4	100	52.595	ENSSDUG00000004657	sall4	99	52.473	Seriola_dumerili
ENSGAGG00000002297	SALL4	100	52.775	ENSSLDG00000004973	sall4	99	52.827	Seriola_lalandi_dorsalis
ENSGAGG00000002297	SALL4	99	51.449	ENSSPAG00000001978	sall4	99	51.593	Stegastes_partitus
ENSGAGG00000002297	SALL4	100	56.266	ENSSSCG00000007479	SALL4	100	55.916	Sus_scrofa
ENSGAGG00000002297	SALL4	99	52.259	ENSTRUG00000007410	sall4	99	51.816	Takifugu_rubripes
ENSGAGG00000002297	SALL4	99	51.599	ENSTNIG00000012460	sall4	99	51.819	Tetraodon_nigroviridis
ENSGAGG00000002297	SALL4	98	54.662	ENSTTRG00000007753	SALL4	100	54.205	Tursiops_truncatus
ENSGAGG00000002297	SALL4	100	57.343	ENSUAMG00000010113	SALL4	100	57.230	Ursus_americanus
ENSGAGG00000002297	SALL4	98	57.532	ENSUMAG00000024274	SALL4	99	57.260	Ursus_maritimus
ENSGAGG00000002297	SALL4	100	64.960	ENSXETG00000012326	sall4	100	64.960	Xenopus_tropicalis
ENSGAGG00000002297	SALL4	100	47.661	ENSXCOG00000015467	sall4	99	47.795	Xiphophorus_couchianus
ENSGAGG00000002297	SALL4	100	48.063	ENSXMAG00000012692	sall4	99	48.239	Xiphophorus_maculatus