EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000002611 (Gene tree)
Gene ID: -
Gene Symbol: SFSWAP
Alias: SFRS8|SWAP
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 87075 bases
Position: chrPPEB01000462.1:102304-189378
Accession: 10790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000003255	DRY_EERY	PF09750.9	3.1e-33	1	1
ENSGAGP00000003243	DRY_EERY	PF09750.9	3.2e-33	1	1
ENSGAGP00000003230	DRY_EERY	PF09750.9	3.4e-33	1	1
ENSGAGP00000003255	Surp	PF01805.20	1e-26	1	2
ENSGAGP00000003255	Surp	PF01805.20	1e-26	2	2
ENSGAGP00000003243	Surp	PF01805.20	1.1e-26	1	2
ENSGAGP00000003243	Surp	PF01805.20	1.1e-26	2	2
ENSGAGP00000003230	Surp	PF01805.20	1.2e-26	1	2
ENSGAGP00000003230	Surp	PF01805.20	1.2e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000003726	SFSWAP-201	3802	-	ENSGAGP00000003230	1034 (aa)	-	-
ENSGAGT00000003740	SFSWAP-202	3730	-	ENSGAGP00000003243	1010 (aa)	-	-
ENSGAGT00000003753	SFSWAP-203	3646	-	ENSGAGP00000003255	982 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000002611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000002611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000002611	SFSWAP	96	79.103	ENSG00000061936	SFSWAP	98	79.412	Homo_sapiens
ENSGAGG00000002611	SFSWAP	70	58.101	ENSAPOG00000005784	sfswap	88	57.036	Acanthochromis_polyacanthus
ENSGAGG00000002611	SFSWAP	100	72.764	ENSAMEG00000013818	SFSWAP	100	71.414	Ailuropoda_melanoleuca
ENSGAGG00000002611	SFSWAP	70	58.708	ENSAOCG00000016469	sfswap	69	58.097	Amphiprion_ocellaris
ENSGAGG00000002611	SFSWAP	70	58.427	ENSAPEG00000004965	sfswap	69	58.097	Amphiprion_percula
ENSGAGG00000002611	SFSWAP	69	60.795	ENSATEG00000021053	sfswap	88	57.866	Anabas_testudineus
ENSGAGG00000002611	SFSWAP	99	84.435	ENSAPLG00000013808	SFSWAP	97	86.667	Anas_platyrhynchos
ENSGAGG00000002611	SFSWAP	93	75.956	ENSACAG00000007220	SFSWAP	100	75.628	Anolis_carolinensis
ENSGAGG00000002611	SFSWAP	96	78.163	ENSANAG00000001518	SFSWAP	100	74.732	Aotus_nancymaae
ENSGAGG00000002611	SFSWAP	77	59.831	ENSACLG00000020159	sfswap	83	59.605	Astatotilapia_calliptera
ENSGAGG00000002611	SFSWAP	100	76.575	ENSBTAG00000000439	SFSWAP	100	75.980	Bos_taurus
ENSGAGG00000002611	SFSWAP	96	77.182	ENSCJAG00000003613	SFSWAP	100	74.182	Callithrix_jacchus
ENSGAGG00000002611	SFSWAP	100	75.254	ENSCAFG00000006625	SFSWAP	100	73.360	Canis_familiaris
ENSGAGG00000002611	SFSWAP	86	69.185	ENSCAFG00020011254	SFSWAP	99	67.420	Canis_lupus_dingo
ENSGAGG00000002611	SFSWAP	100	76.824	ENSCHIG00000008838	SFSWAP	100	75.444	Capra_hircus
ENSGAGG00000002611	SFSWAP	96	78.630	ENSCATG00000031094	SFSWAP	100	75.464	Cercocebus_atys
ENSGAGG00000002611	SFSWAP	98	75.510	ENSCLAG00000008380	SFSWAP	100	73.869	Chinchilla_lanigera
ENSGAGG00000002611	SFSWAP	96	78.000	ENSCSAG00000001884	SFSWAP	100	74.774	Chlorocebus_sabaeus
ENSGAGG00000002611	SFSWAP	92	66.998	ENSCHOG00000003578	SFSWAP	99	68.256	Choloepus_hoffmanni
ENSGAGG00000002611	SFSWAP	100	97.589	ENSCPBG00000024757	SFSWAP	100	97.589	Chrysemys_picta_bellii
ENSGAGG00000002611	SFSWAP	96	78.528	ENSCANG00000036501	SFSWAP	100	75.367	Colobus_angolensis_palliatus
ENSGAGG00000002611	SFSWAP	98	74.627	ENSCGRG00001011284	Sfswap	97	75.897	Cricetulus_griseus_chok1gshd
ENSGAGG00000002611	SFSWAP	98	73.593	ENSCGRG00000017417	Sfswap	97	74.551	Cricetulus_griseus_crigri
ENSGAGG00000002611	SFSWAP	75	60.492	ENSCSEG00000003773	sfswap	68	61.127	Cynoglossus_semilaevis
ENSGAGG00000002611	SFSWAP	50	58.333	ENSCVAG00000001205	-	97	45.839	Cyprinodon_variegatus
ENSGAGG00000002611	SFSWAP	96	78.872	ENSDNOG00000018742	SFSWAP	99	76.373	Dasypus_novemcinctus
ENSGAGG00000002611	SFSWAP	96	69.684	ENSDORG00000010352	Sfswap	99	67.895	Dipodomys_ordii
ENSGAGG00000002611	SFSWAP	62	36.316	FBgn0003638	su(w[a])	56	55.556	Drosophila_melanogaster
ENSGAGG00000002611	SFSWAP	77	83.333	ENSETEG00000016657	-	86	83.333	Echinops_telfairi
ENSGAGG00000002611	SFSWAP	83	36.079	ENSEBUG00000016748	SFSWAP	99	34.483	Eptatretus_burgeri
ENSGAGG00000002611	SFSWAP	100	78.008	ENSEASG00005016502	SFSWAP	100	76.078	Equus_asinus_asinus
ENSGAGG00000002611	SFSWAP	100	77.909	ENSECAG00000007657	SFSWAP	100	75.980	Equus_caballus
ENSGAGG00000002611	SFSWAP	86	62.411	ENSEEUG00000001713	SFSWAP	99	60.471	Erinaceus_europaeus
ENSGAGG00000002611	SFSWAP	96	51.819	ENSELUG00000010942	sfswap	97	52.246	Esox_lucius
ENSGAGG00000002611	SFSWAP	100	75.558	ENSFCAG00000010778	SFSWAP	100	73.663	Felis_catus
ENSGAGG00000002611	SFSWAP	100	84.242	ENSFALG00000009577	SFSWAP	100	84.040	Ficedula_albicollis
ENSGAGG00000002611	SFSWAP	98	73.577	ENSFDAG00000017235	SFSWAP	100	72.472	Fukomys_damarensis
ENSGAGG00000002611	SFSWAP	96	87.334	ENSGALG00000002487	SFSWAP	97	87.513	Gallus_gallus
ENSGAGG00000002611	SFSWAP	81	59.607	ENSGAFG00000006272	sfswap	97	54.676	Gambusia_affinis
ENSGAGG00000002611	SFSWAP	69	70.455	ENSGACG00000017647	sfswap	98	56.783	Gasterosteus_aculeatus
ENSGAGG00000002611	SFSWAP	96	79.001	ENSGGOG00000014877	SFSWAP	100	75.926	Gorilla_gorilla
ENSGAGG00000002611	SFSWAP	86	59.831	ENSHBUG00000005629	sfswap	83	59.040	Haplochromis_burtoni
ENSGAGG00000002611	SFSWAP	70	73.810	ENSHCOG00000009475	sfswap	69	58.883	Hippocampus_comes
ENSGAGG00000002611	SFSWAP	97	54.518	ENSIPUG00000010598	sfswap	98	55.354	Ictalurus_punctatus
ENSGAGG00000002611	SFSWAP	98	74.949	ENSSTOG00000000773	SFSWAP	100	73.615	Ictidomys_tridecemlineatus
ENSGAGG00000002611	SFSWAP	96	76.558	ENSJJAG00000006609	Sfswap	97	74.841	Jaculus_jaculus
ENSGAGG00000002611	SFSWAP	70	58.287	ENSKMAG00000013168	sfswap	69	59.637	Kryptolebias_marmoratus
ENSGAGG00000002611	SFSWAP	70	58.251	ENSLBEG00000010239	sfswap	74	59.065	Labrus_bergylta
ENSGAGG00000002611	SFSWAP	99	61.881	ENSLACG00000018678	SFSWAP	96	62.998	Latimeria_chalumnae
ENSGAGG00000002611	SFSWAP	92	78.319	ENSLAFG00000014462	SFSWAP	100	76.770	Loxodonta_africana
ENSGAGG00000002611	SFSWAP	96	78.630	ENSMFAG00000037352	SFSWAP	100	75.464	Macaca_fascicularis
ENSGAGG00000002611	SFSWAP	96	78.316	ENSMMUG00000020343	SFSWAP	100	74.975	Macaca_mulatta
ENSGAGG00000002611	SFSWAP	96	78.834	ENSMNEG00000041002	SFSWAP	100	75.562	Macaca_nemestrina
ENSGAGG00000002611	SFSWAP	96	76.761	ENSMLEG00000035728	SFSWAP	100	73.193	Mandrillus_leucophaeus
ENSGAGG00000002611	SFSWAP	95	52.472	ENSMAMG00000006631	sfswap	97	52.454	Mastacembelus_armatus
ENSGAGG00000002611	SFSWAP	70	59.831	ENSMZEG00005017834	SFSWAP	83	59.605	Maylandia_zebra
ENSGAGG00000002611	SFSWAP	96	86.735	ENSMGAG00000002191	SFSWAP	97	86.810	Meleagris_gallopavo
ENSGAGG00000002611	SFSWAP	98	73.490	ENSMOCG00000014390	Sfswap	100	72.306	Microtus_ochrogaster
ENSGAGG00000002611	SFSWAP	97	88.235	ENSMODG00000015581	SFSWAP	94	69.726	Monodelphis_domestica
ENSGAGG00000002611	SFSWAP	67	60.429	ENSMALG00000012603	sfswap	97	55.529	Monopterus_albus
ENSGAGG00000002611	SFSWAP	52	72.674	MGP_CAROLIEiJ_G0027780	Sfswap	100	73.212	Mus_caroli
ENSGAGG00000002611	SFSWAP	96	75.713	ENSMUSG00000029439	Sfswap	100	73.212	Mus_musculus
ENSGAGG00000002611	SFSWAP	52	72.254	MGP_PahariEiJ_G0024360	Sfswap	100	73.092	Mus_pahari
ENSGAGG00000002611	SFSWAP	96	75.502	MGP_SPRETEiJ_G0028779	Sfswap	100	73.011	Mus_spretus
ENSGAGG00000002611	SFSWAP	100	76.065	ENSMPUG00000002218	SFSWAP	100	74.268	Mustela_putorius_furo
ENSGAGG00000002611	SFSWAP	90	68.710	ENSMLUG00000011296	SFSWAP	100	86.667	Myotis_lucifugus
ENSGAGG00000002611	SFSWAP	96	75.553	ENSNGAG00000018167	Sfswap	97	74.605	Nannospalax_galili
ENSGAGG00000002611	SFSWAP	75	58.150	ENSNBRG00000020857	sfswap	69	57.887	Neolamprologus_brichardi
ENSGAGG00000002611	SFSWAP	96	76.171	ENSNLEG00000008386	SFSWAP	100	70.441	Nomascus_leucogenys
ENSGAGG00000002611	SFSWAP	71	78.000	ENSMEUG00000009556	-	79	74.394	Notamacropus_eugenii
ENSGAGG00000002611	SFSWAP	91	76.987	ENSOPRG00000006983	-	90	72.803	Ochotona_princeps
ENSGAGG00000002611	SFSWAP	95	54.179	ENSONIG00000003757	sfswap	99	52.918	Oreochromis_niloticus
ENSGAGG00000002611	SFSWAP	52	77.476	ENSOANG00000013861	SFSWAP	100	80.420	Ornithorhynchus_anatinus
ENSGAGG00000002611	SFSWAP	80	58.924	ENSORLG00000010983	sfswap	97	52.121	Oryzias_latipes
ENSGAGG00000002611	SFSWAP	80	58.840	ENSORLG00020010779	sfswap	97	52.020	Oryzias_latipes_hni
ENSGAGG00000002611	SFSWAP	80	58.782	ENSORLG00015023093	sfswap	97	52.020	Oryzias_latipes_hsok
ENSGAGG00000002611	SFSWAP	70	58.964	ENSOMEG00000022065	sfswap	97	53.925	Oryzias_melastigma
ENSGAGG00000002611	SFSWAP	100	75.984	ENSOARG00000014314	SFSWAP	100	74.803	Ovis_aries
ENSGAGG00000002611	SFSWAP	96	79.205	ENSPPAG00000036706	SFSWAP	100	76.092	Pan_paniscus
ENSGAGG00000002611	SFSWAP	100	72.091	ENSPPRG00000017318	SFSWAP	100	70.559	Panthera_pardus
ENSGAGG00000002611	SFSWAP	94	66.882	ENSPTIG00000004304	SFSWAP	99	65.407	Panthera_tigris_altaica
ENSGAGG00000002611	SFSWAP	96	79.205	ENSPTRG00000005640	SFSWAP	100	76.214	Pan_troglodytes
ENSGAGG00000002611	SFSWAP	96	78.630	ENSPANG00000019737	SFSWAP	100	75.464	Papio_anubis
ENSGAGG00000002611	SFSWAP	70	61.571	ENSPKIG00000008327	sfswap	97	52.457	Paramormyrops_kingsleyae
ENSGAGG00000002611	SFSWAP	62	94.612	ENSPSIG00000017807	SFSWAP	100	94.612	Pelodiscus_sinensis
ENSGAGG00000002611	SFSWAP	100	73.759	ENSPEMG00000001237	Sfswap	100	72.636	Peromyscus_maniculatus_bairdii
ENSGAGG00000002611	SFSWAP	96	77.413	ENSPCIG00000006062	SFSWAP	94	75.230	Phascolarctos_cinereus
ENSGAGG00000002611	SFSWAP	81	58.824	ENSPFOG00000019657	sfswap	97	54.611	Poecilia_formosa
ENSGAGG00000002611	SFSWAP	79	59.264	ENSPLAG00000008513	sfswap	97	55.026	Poecilia_latipinna
ENSGAGG00000002611	SFSWAP	81	58.824	ENSPMEG00000008716	sfswap	97	54.819	Poecilia_mexicana
ENSGAGG00000002611	SFSWAP	81	58.403	ENSPREG00000006692	sfswap	97	54.964	Poecilia_reticulata
ENSGAGG00000002611	SFSWAP	96	76.205	ENSPPYG00000005129	SFSWAP	100	74.184	Pongo_abelii
ENSGAGG00000002611	SFSWAP	51	87.097	ENSPCAG00000004977	-	65	86.667	Procavia_capensis
ENSGAGG00000002611	SFSWAP	89	76.825	ENSPVAG00000014918	SFSWAP	92	74.030	Pteropus_vampyrus
ENSGAGG00000002611	SFSWAP	86	59.831	ENSPNYG00000012660	sfswap	82	59.605	Pundamilia_nyererei
ENSGAGG00000002611	SFSWAP	98	75.025	ENSRNOG00000000931	Sfswap	100	73.653	Rattus_norvegicus
ENSGAGG00000002611	SFSWAP	96	72.919	ENSRBIG00000036330	SFSWAP	100	67.992	Rhinopithecus_bieti
ENSGAGG00000002611	SFSWAP	96	78.425	ENSRROG00000032001	SFSWAP	100	75.269	Rhinopithecus_roxellana
ENSGAGG00000002611	SFSWAP	96	77.392	ENSSBOG00000026217	SFSWAP	100	74.916	Saimiri_boliviensis_boliviensis
ENSGAGG00000002611	SFSWAP	92	78.768	ENSSHAG00000014232	SFSWAP	100	78.485	Sarcophilus_harrisii
ENSGAGG00000002611	SFSWAP	67	60.895	ENSSFOG00015000766	sfswap	97	51.515	Scleropages_formosus
ENSGAGG00000002611	SFSWAP	69	58.956	ENSSMAG00000018718	sfswap	70	57.024	Scophthalmus_maximus
ENSGAGG00000002611	SFSWAP	70	60.141	ENSSDUG00000021680	sfswap	68	57.465	Seriola_dumerili
ENSGAGG00000002611	SFSWAP	70	60.141	ENSSLDG00000010835	sfswap	82	59.296	Seriola_lalandi_dorsalis
ENSGAGG00000002611	SFSWAP	76	81.373	ENSSARG00000000424	SFSWAP	85	81.373	Sorex_araneus
ENSGAGG00000002611	SFSWAP	86	80.611	ENSSPUG00000010272	SFSWAP	99	80.378	Sphenodon_punctatus
ENSGAGG00000002611	SFSWAP	70	59.659	ENSSPAG00000014310	sfswap	83	58.239	Stegastes_partitus
ENSGAGG00000002611	SFSWAP	100	74.975	ENSSSCG00000009744	SFSWAP	100	74.723	Sus_scrofa
ENSGAGG00000002611	SFSWAP	96	84.461	ENSTGUG00000004623	SFSWAP	99	84.444	Taeniopygia_guttata
ENSGAGG00000002611	SFSWAP	52	81.250	ENSTBEG00000004983	-	66	83.333	Tupaia_belangeri
ENSGAGG00000002611	SFSWAP	100	67.172	ENSTTRG00000013478	SFSWAP	99	69.053	Tursiops_truncatus
ENSGAGG00000002611	SFSWAP	100	73.476	ENSUAMG00000016807	SFSWAP	100	72.727	Ursus_americanus
ENSGAGG00000002611	SFSWAP	55	75.926	ENSVPAG00000010479	-	74	75.926	Vicugna_pacos
ENSGAGG00000002611	SFSWAP	96	76.427	ENSVVUG00000010753	SFSWAP	100	73.030	Vulpes_vulpes
ENSGAGG00000002611	SFSWAP	96	60.993	ENSXETG00000009350	sfswap	93	66.713	Xenopus_tropicalis
ENSGAGG00000002611	SFSWAP	81	59.607	ENSXMAG00000009020	sfswap	97	54.928	Xiphophorus_maculatus