EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000002828 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 1347 bases
Position: chrPPEB01009648.1:1755-3101
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000003502	zf-C2H2	PF00096.26	2.3e-60	1	10
ENSGAGP00000003502	zf-C2H2	PF00096.26	2.3e-60	2	10
ENSGAGP00000003502	zf-C2H2	PF00096.26	2.3e-60	3	10
ENSGAGP00000003502	zf-C2H2	PF00096.26	2.3e-60	4	10
ENSGAGP00000003502	zf-C2H2	PF00096.26	2.3e-60	5	10
ENSGAGP00000003502	zf-C2H2	PF00096.26	2.3e-60	6	10
ENSGAGP00000003502	zf-C2H2	PF00096.26	2.3e-60	7	10
ENSGAGP00000003502	zf-C2H2	PF00096.26	2.3e-60	8	10
ENSGAGP00000003502	zf-C2H2	PF00096.26	2.3e-60	9	10
ENSGAGP00000003502	zf-C2H2	PF00096.26	2.3e-60	10	10
ENSGAGP00000003502	zf-met	PF12874.7	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000004039	-	1347	-	ENSGAGP00000003502	448 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000002828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000002828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000002828	-	90	55.597	ENSGAGG00000015451	-	98	55.597
ENSGAGG00000002828	-	79	55.219	ENSGAGG00000001387	-	70	55.219
ENSGAGG00000002828	-	68	55.556	ENSGAGG00000006848	-	53	57.754
ENSGAGG00000002828	-	69	55.502	ENSGAGG00000006846	-	87	52.000
ENSGAGG00000002828	-	88	57.770	ENSGAGG00000014356	-	83	57.770
ENSGAGG00000002828	-	70	40.851	ENSGAGG00000003095	ZNF865	87	40.851
ENSGAGG00000002828	-	80	67.667	ENSGAGG00000005805	-	100	67.667
ENSGAGG00000002828	-	78	60.452	ENSGAGG00000016529	-	97	60.452
ENSGAGG00000002828	-	85	62.085	ENSGAGG00000012452	-	89	62.085
ENSGAGG00000002828	-	79	52.885	ENSGAGG00000013851	-	93	56.944
ENSGAGG00000002828	-	78	55.696	ENSGAGG00000011574	-	96	55.696
ENSGAGG00000002828	-	80	63.918	ENSGAGG00000001469	-	100	63.918
ENSGAGG00000002828	-	99	60.797	ENSGAGG00000020594	-	97	60.797
ENSGAGG00000002828	-	74	71.429	ENSGAGG00000010492	-	85	71.429
ENSGAGG00000002828	-	89	61.111	ENSGAGG00000009272	-	96	61.111
ENSGAGG00000002828	-	88	60.287	ENSGAGG00000004740	-	96	62.752
ENSGAGG00000002828	-	69	54.643	ENSGAGG00000020168	-	74	54.651
ENSGAGG00000002828	-	88	61.932	ENSGAGG00000002179	-	99	61.932
ENSGAGG00000002828	-	68	63.889	ENSGAGG00000000971	-	91	63.889
ENSGAGG00000002828	-	77	56.772	ENSGAGG00000017986	-	96	60.667
ENSGAGG00000002828	-	82	56.410	ENSGAGG00000018445	-	99	56.410
ENSGAGG00000002828	-	68	59.170	ENSGAGG00000019349	-	77	59.170
ENSGAGG00000002828	-	76	54.187	ENSGAGG00000005331	-	92	48.585
ENSGAGG00000002828	-	78	66.467	ENSGAGG00000006683	-	98	66.467
ENSGAGG00000002828	-	68	68.293	ENSGAGG00000014389	-	98	68.293
ENSGAGG00000002828	-	68	48.765	ENSGAGG00000013021	-	95	48.765
ENSGAGG00000002828	-	67	33.835	ENSGAGG00000020362	PRDM5	75	35.545
ENSGAGG00000002828	-	67	46.584	ENSGAGG00000021327	GFI1B	52	46.584
ENSGAGG00000002828	-	70	39.077	ENSGAGG00000022571	ZNF319	93	39.077
ENSGAGG00000002828	-	99	66.667	ENSGAGG00000010324	-	95	66.667
ENSGAGG00000002828	-	67	59.396	ENSGAGG00000001645	-	64	59.396
ENSGAGG00000002828	-	70	53.430	ENSGAGG00000018885	-	66	53.430
ENSGAGG00000002828	-	81	37.931	ENSGAGG00000003883	ZNF236	61	37.705
ENSGAGG00000002828	-	68	52.660	ENSGAGG00000004926	-	96	52.660
ENSGAGG00000002828	-	67	61.538	ENSGAGG00000015232	-	68	61.538
ENSGAGG00000002828	-	70	53.571	ENSGAGG00000011399	-	84	53.571
ENSGAGG00000002828	-	91	60.662	ENSGAGG00000008773	-	96	60.662
ENSGAGG00000002828	-	88	61.034	ENSGAGG00000006960	-	98	61.034
ENSGAGG00000002828	-	95	61.837	ENSGAGG00000017640	-	99	61.837
ENSGAGG00000002828	-	86	63.077	ENSGAGG00000011487	-	87	63.077
ENSGAGG00000002828	-	69	54.276	ENSGAGG00000011366	-	92	54.276
ENSGAGG00000002828	-	67	58.974	ENSGAGG00000007230	-	77	58.974
ENSGAGG00000002828	-	90	70.250	ENSGAGG00000006323	-	94	67.114
ENSGAGG00000002828	-	69	47.138	ENSGAGG00000017094	-	50	47.138
ENSGAGG00000002828	-	88	62.626	ENSGAGG00000010833	-	97	61.889
ENSGAGG00000002828	-	68	65.748	ENSGAGG00000009739	-	99	65.748
ENSGAGG00000002828	-	99	64.548	ENSGAGG00000020134	-	77	64.548
ENSGAGG00000002828	-	82	65.934	ENSGAGG00000002214	-	91	65.934

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000002828	-	85	51.034	ENSG00000198482	ZNF808	92	51.034	Homo_sapiens
ENSGAGG00000002828	-	71	55.839	ENSAMEG00000014454	-	99	55.839	Ailuropoda_melanoleuca
ENSGAGG00000002828	-	80	49.827	ENSACIG00000015429	-	89	48.299	Amphilophus_citrinellus
ENSGAGG00000002828	-	69	55.333	ENSACAG00000013039	-	99	55.333	Anolis_carolinensis
ENSGAGG00000002828	-	90	52.209	ENSACAG00000025611	-	78	52.209	Anolis_carolinensis
ENSGAGG00000002828	-	71	57.051	ENSACAG00000029487	-	80	57.051	Anolis_carolinensis
ENSGAGG00000002828	-	80	53.368	ENSACLG00000017576	-	87	56.061	Astatotilapia_calliptera
ENSGAGG00000002828	-	81	56.281	ENSACLG00000019318	-	96	51.439	Astatotilapia_calliptera
ENSGAGG00000002828	-	68	52.817	ENSAMXG00000012604	-	98	52.817	Astyanax_mexicanus
ENSGAGG00000002828	-	68	61.856	ENSAMXG00000041861	-	87	61.856	Astyanax_mexicanus
ENSGAGG00000002828	-	68	60.784	ENSAMXG00000025965	-	94	60.784	Astyanax_mexicanus
ENSGAGG00000002828	-	68	58.362	ENSAMXG00000033500	-	91	59.247	Astyanax_mexicanus
ENSGAGG00000002828	-	68	62.500	ENSAMXG00000018161	-	95	62.500	Astyanax_mexicanus
ENSGAGG00000002828	-	69	55.137	ENSAMXG00000009563	-	93	55.137	Astyanax_mexicanus
ENSGAGG00000002828	-	69	58.824	ENSAMXG00000042938	-	90	58.824	Astyanax_mexicanus
ENSGAGG00000002828	-	68	58.791	ENSAMXG00000041721	-	69	58.791	Astyanax_mexicanus
ENSGAGG00000002828	-	68	55.363	ENSAMXG00000038280	-	87	55.363	Astyanax_mexicanus
ENSGAGG00000002828	-	68	56.711	ENSAMXG00000031496	-	86	56.711	Astyanax_mexicanus
ENSGAGG00000002828	-	68	55.392	ENSAMXG00000037717	-	95	55.392	Astyanax_mexicanus
ENSGAGG00000002828	-	68	61.594	ENSAMXG00000030530	-	97	54.902	Astyanax_mexicanus
ENSGAGG00000002828	-	69	57.237	ENSAMXG00000029828	-	97	57.237	Astyanax_mexicanus
ENSGAGG00000002828	-	68	60.137	ENSAMXG00000036762	-	96	60.137	Astyanax_mexicanus
ENSGAGG00000002828	-	68	61.887	ENSAMXG00000031900	-	91	61.887	Astyanax_mexicanus
ENSGAGG00000002828	-	67	54.044	ENSBTAG00000050322	-	70	54.044	Bos_taurus
ENSGAGG00000002828	-	68	50.951	ENSBTAG00000030470	-	72	50.951	Bos_taurus
ENSGAGG00000002828	-	69	53.125	ENSCHIG00000020931	-	80	53.125	Capra_hircus
ENSGAGG00000002828	-	85	51.678	ENSCATG00000036940	ZNF808	86	51.678	Cercocebus_atys
ENSGAGG00000002828	-	86	51.678	ENSCSAG00000001974	ZNF808	91	51.678	Chlorocebus_sabaeus
ENSGAGG00000002828	-	82	64.103	ENSCPBG00000003130	-	100	64.430	Chrysemys_picta_bellii
ENSGAGG00000002828	-	91	74.752	ENSCPBG00000003774	-	95	70.085	Chrysemys_picta_bellii
ENSGAGG00000002828	-	80	73.226	ENSCPBG00000017489	-	98	73.226	Chrysemys_picta_bellii
ENSGAGG00000002828	-	76	62.865	ENSCPBG00000015500	-	93	63.077	Chrysemys_picta_bellii
ENSGAGG00000002828	-	68	41.048	ENSCING00000024509	-	91	41.048	Ciona_intestinalis
ENSGAGG00000002828	-	82	50.336	ENSCSAVG00000009583	-	99	50.763	Ciona_savignyi
ENSGAGG00000002828	-	75	48.289	ENSCSAVG00000000642	-	100	49.669	Ciona_savignyi
ENSGAGG00000002828	-	74	47.308	ENSCSAVG00000000649	-	99	47.308	Ciona_savignyi
ENSGAGG00000002828	-	83	51.171	ENSCANG00000019002	ZNF808	81	51.171	Colobus_angolensis_palliatus
ENSGAGG00000002828	-	69	51.667	ENSCGRG00001012523	-	98	52.027	Cricetulus_griseus_chok1gshd
ENSGAGG00000002828	-	69	50.781	ENSCGRG00001011966	Zfp715	71	51.000	Cricetulus_griseus_chok1gshd
ENSGAGG00000002828	-	69	50.781	ENSCGRG00000013626	Zfp715	68	51.000	Cricetulus_griseus_crigri
ENSGAGG00000002828	-	69	54.211	ENSEBUG00000014648	-	72	54.211	Eptatretus_burgeri
ENSGAGG00000002828	-	69	54.082	ENSEBUG00000003455	-	76	54.082	Eptatretus_burgeri
ENSGAGG00000002828	-	69	50.350	ENSEBUG00000006987	-	97	50.350	Eptatretus_burgeri
ENSGAGG00000002828	-	90	54.608	ENSEBUG00000005703	-	98	54.608	Eptatretus_burgeri
ENSGAGG00000002828	-	67	52.601	ENSEBUG00000010472	-	74	51.246	Eptatretus_burgeri
ENSGAGG00000002828	-	67	43.554	ENSEBUG00000006129	-	79	43.554	Eptatretus_burgeri
ENSGAGG00000002828	-	68	46.786	ENSEBUG00000003078	-	70	46.786	Eptatretus_burgeri
ENSGAGG00000002828	-	70	49.333	ENSEBUG00000009909	-	81	49.333	Eptatretus_burgeri
ENSGAGG00000002828	-	68	49.097	ENSEBUG00000005012	-	61	49.097	Eptatretus_burgeri
ENSGAGG00000002828	-	72	49.470	ENSEBUG00000006249	-	83	49.470	Eptatretus_burgeri
ENSGAGG00000002828	-	69	54.153	ENSEBUG00000001972	-	71	54.153	Eptatretus_burgeri
ENSGAGG00000002828	-	70	52.500	ENSEBUG00000014542	-	69	51.364	Eptatretus_burgeri
ENSGAGG00000002828	-	94	52.013	ENSEBUG00000014597	-	98	52.013	Eptatretus_burgeri
ENSGAGG00000002828	-	77	56.522	ENSEBUG00000008903	-	77	56.522	Eptatretus_burgeri
ENSGAGG00000002828	-	74	53.846	ENSGAFG00000017066	-	71	53.846	Gambusia_affinis
ENSGAGG00000002828	-	86	51.034	ENSGGOG00000003352	ZNF808	85	51.034	Gorilla_gorilla
ENSGAGG00000002828	-	77	50.685	ENSHBUG00000001075	-	96	50.685	Haplochromis_burtoni
ENSGAGG00000002828	-	69	56.485	ENSLACG00000014708	-	67	55.333	Latimeria_chalumnae
ENSGAGG00000002828	-	85	51.678	ENSMFAG00000007422	ZNF808	87	51.678	Macaca_fascicularis
ENSGAGG00000002828	-	85	51.678	ENSMMUG00000012083	ZNF808	87	51.678	Macaca_mulatta
ENSGAGG00000002828	-	82	51.678	ENSMNEG00000043562	ZNF808	84	51.678	Macaca_nemestrina
ENSGAGG00000002828	-	82	51.495	ENSMLEG00000038043	ZNF808	75	51.495	Mandrillus_leucophaeus
ENSGAGG00000002828	-	68	53.633	ENSMZEG00005021865	-	94	53.757	Maylandia_zebra
ENSGAGG00000002828	-	81	48.561	ENSMZEG00005025012	-	99	50.000	Maylandia_zebra
ENSGAGG00000002828	-	68	57.241	ENSMICG00000042544	-	75	57.241	Microcebus_murinus
ENSGAGG00000002828	-	69	53.025	ENSMODG00000018622	-	98	53.025	Monodelphis_domestica
ENSGAGG00000002828	-	69	50.831	MGP_CAROLIEiJ_G0029614	Zfp715	66	50.831	Mus_caroli
ENSGAGG00000002828	-	68	57.667	MGP_CAROLIEiJ_G0029490	Zfp420	98	57.667	Mus_caroli
ENSGAGG00000002828	-	69	53.725	MGP_CAROLIEiJ_G0021128	Zfp51	79	53.725	Mus_caroli
ENSGAGG00000002828	-	68	49.669	MGP_CAROLIEiJ_G0029427	-	88	49.669	Mus_caroli
ENSGAGG00000002828	-	68	57.667	ENSMUSG00000058402	Zfp420	99	57.667	Mus_musculus
ENSGAGG00000002828	-	69	50.498	ENSMUSG00000012640	Zfp715	66	50.671	Mus_musculus
ENSGAGG00000002828	-	69	53.979	ENSMUSG00000023892	Zfp51	81	53.979	Mus_musculus
ENSGAGG00000002828	-	68	45.695	ENSMUSG00000070709	Zfp974	90	45.695	Mus_musculus
ENSGAGG00000002828	-	68	49.042	MGP_PahariEiJ_G0012663	-	76	49.042	Mus_pahari
ENSGAGG00000002828	-	68	57.667	MGP_PahariEiJ_G0012724	Zfp420	98	57.667	Mus_pahari
ENSGAGG00000002828	-	69	53.282	MGP_PahariEiJ_G0023447	Zfp51	87	53.282	Mus_pahari
ENSGAGG00000002828	-	68	45.594	MGP_SPRETEiJ_G0030525	-	82	46.043	Mus_spretus
ENSGAGG00000002828	-	68	50.331	MGP_SPRETEiJ_G0030526	-	86	50.331	Mus_spretus
ENSGAGG00000002828	-	68	57.667	MGP_SPRETEiJ_G0030586	Zfp420	98	57.667	Mus_spretus
ENSGAGG00000002828	-	69	50.498	MGP_SPRETEiJ_G0030713	Zfp715	66	50.671	Mus_spretus
ENSGAGG00000002828	-	71	55.556	ENSMLUG00000015757	-	96	56.061	Myotis_lucifugus
ENSGAGG00000002828	-	69	51.370	ENSMLUG00000009276	-	86	51.370	Myotis_lucifugus
ENSGAGG00000002828	-	71	52.159	ENSNLEG00000006042	ZNF808	76	52.159	Nomascus_leucogenys
ENSGAGG00000002828	-	68	51.449	ENSONIG00000007396	-	99	51.449	Oreochromis_niloticus
ENSGAGG00000002828	-	69	43.614	ENSONIG00000016979	-	93	43.614	Oreochromis_niloticus
ENSGAGG00000002828	-	69	53.114	ENSORLG00000011040	-	87	53.114	Oryzias_latipes
ENSGAGG00000002828	-	68	49.074	ENSOMEG00000001622	-	92	47.231	Oryzias_melastigma
ENSGAGG00000002828	-	68	45.455	ENSOMEG00000018871	-	59	45.455	Oryzias_melastigma
ENSGAGG00000002828	-	68	50.538	ENSOARG00000002896	-	76	50.538	Ovis_aries
ENSGAGG00000002828	-	85	50.836	ENSPPAG00000038086	ZNF808	85	50.836	Pan_paniscus
ENSGAGG00000002828	-	85	51.678	ENSPANG00000011361	ZNF808	86	51.678	Papio_anubis
ENSGAGG00000002828	-	69	52.336	ENSPSIG00000008588	-	100	50.836	Pelodiscus_sinensis
ENSGAGG00000002828	-	68	60.526	ENSPSIG00000009603	-	99	60.526	Pelodiscus_sinensis
ENSGAGG00000002828	-	69	55.482	ENSPEMG00000000548	-	89	55.482	Peromyscus_maniculatus_bairdii
ENSGAGG00000002828	-	71	58.307	ENSPCIG00000018929	-	94	58.029	Phascolarctos_cinereus
ENSGAGG00000002828	-	81	52.191	ENSPLAG00000014660	-	85	52.191	Poecilia_latipinna
ENSGAGG00000002828	-	67	41.509	ENSPREG00000008826	-	88	41.509	Poecilia_reticulata
ENSGAGG00000002828	-	92	50.836	ENSPPYG00000029644	ZNF808	85	50.836	Pongo_abelii
ENSGAGG00000002828	-	69	55.351	ENSPVAG00000009433	-	99	55.351	Pteropus_vampyrus
ENSGAGG00000002828	-	69	61.462	ENSPNAG00000016478	-	99	61.462	Pygocentrus_nattereri
ENSGAGG00000002828	-	70	59.732	ENSPNAG00000005829	-	98	59.732	Pygocentrus_nattereri
ENSGAGG00000002828	-	69	62.548	ENSPNAG00000012154	-	87	62.548	Pygocentrus_nattereri
ENSGAGG00000002828	-	70	57.383	ENSPNAG00000006039	-	92	57.383	Pygocentrus_nattereri
ENSGAGG00000002828	-	68	59.864	ENSPNAG00000012495	-	80	59.864	Pygocentrus_nattereri
ENSGAGG00000002828	-	72	59.122	ENSPNAG00000021831	-	94	59.122	Pygocentrus_nattereri
ENSGAGG00000002828	-	69	56.897	ENSPNAG00000002244	-	80	53.261	Pygocentrus_nattereri
ENSGAGG00000002828	-	69	53.667	ENSRNOG00000043341	Zfp51	87	53.667	Rattus_norvegicus
ENSGAGG00000002828	-	86	54.196	ENSRBIG00000032168	-	88	54.196	Rhinopithecus_bieti
ENSGAGG00000002828	-	83	51.007	ENSRROG00000009467	ZNF808	81	51.007	Rhinopithecus_roxellana
ENSGAGG00000002828	-	100	52.941	ENSSHAG00000003090	-	97	52.941	Sarcophilus_harrisii
ENSGAGG00000002828	-	70	44.444	ENSSLDG00000016301	-	92	44.444	Seriola_lalandi_dorsalis
ENSGAGG00000002828	-	74	59.191	ENSSPUG00000009898	-	99	60.440	Sphenodon_punctatus
ENSGAGG00000002828	-	74	61.745	ENSSPUG00000018867	-	92	61.745	Sphenodon_punctatus
ENSGAGG00000002828	-	69	56.554	ENSSPUG00000000229	-	88	56.554	Sphenodon_punctatus
ENSGAGG00000002828	-	69	61.364	ENSSPUG00000009764	-	62	61.364	Sphenodon_punctatus
ENSGAGG00000002828	-	68	58.170	ENSSPUG00000000136	-	99	58.170	Sphenodon_punctatus
ENSGAGG00000002828	-	68	60.465	ENSTGUG00000014079	-	100	60.465	Taeniopygia_guttata
ENSGAGG00000002828	-	66	38.462	ENSTNIG00000008100	-	100	38.462	Tetraodon_nigroviridis
ENSGAGG00000002828	-	76	45.366	ENSTNIG00000005023	-	100	45.299	Tetraodon_nigroviridis
ENSGAGG00000002828	-	69	48.663	ENSTBEG00000016262	-	99	48.663	Tupaia_belangeri
ENSGAGG00000002828	-	74	54.113	ENSUMAG00000024602	-	97	53.357	Ursus_maritimus
ENSGAGG00000002828	-	68	57.679	ENSXETG00000016781	-	100	57.679	Xenopus_tropicalis