EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000002853 (Gene tree)
Gene ID: -
Gene Symbol: TDP2
Alias: TTRAP
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 11864 bases
Position: chrPPEB01009657.1:23098-34961
Accession: 17768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000003537	Exo_endo_phos	PF03372.23	2.9e-07	1	1
ENSGAGP00000003532	Exo_endo_phos	PF03372.23	6.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000004079	TDP2-202	1430	-	ENSGAGP00000003537	390 (aa)	-	-
ENSGAGT00000004074	TDP2-201	1583	-	ENSGAGP00000003532	441 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000002853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000002853's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000002853	TDP2	87	69.501	ENSG00000111802	TDP2	97	68.466	Homo_sapiens
ENSGAGG00000002853	TDP2	64	54.331	ENSAPOG00000018379	-	89	54.331	Acanthochromis_polyacanthus
ENSGAGG00000002853	TDP2	71	71.942	ENSAMEG00000010230	TDP2	99	71.942	Ailuropoda_melanoleuca
ENSGAGG00000002853	TDP2	65	54.297	ENSAPEG00000004208	-	91	54.297	Amphiprion_percula
ENSGAGG00000002853	TDP2	74	48.667	ENSATEG00000010663	-	82	54.331	Anabas_testudineus
ENSGAGG00000002853	TDP2	86	68.546	ENSACAG00000002332	TDP2	96	67.135	Anolis_carolinensis
ENSGAGG00000002853	TDP2	87	68.805	ENSANAG00000020033	TDP2	96	68.497	Aotus_nancymaae
ENSGAGG00000002853	TDP2	70	50.000	ENSACLG00000016132	tdp2b	93	50.000	Astatotilapia_calliptera
ENSGAGG00000002853	TDP2	64	57.312	ENSACLG00000016148	tdp2b	90	57.312	Astatotilapia_calliptera
ENSGAGG00000002853	TDP2	70	50.362	ENSACLG00000016174	tdp2b	93	50.362	Astatotilapia_calliptera
ENSGAGG00000002853	TDP2	86	50.943	ENSAMXG00000011775	tdp2b	97	50.943	Astyanax_mexicanus
ENSGAGG00000002853	TDP2	67	51.908	ENSAMXG00000036549	tdp2a	86	51.908	Astyanax_mexicanus
ENSGAGG00000002853	TDP2	87	67.347	ENSBTAG00000000365	TDP2	97	66.572	Bos_taurus
ENSGAGG00000002853	TDP2	96	30.184	WBGene00013405	tdpt-1	93	30.579	Caenorhabditis_elegans
ENSGAGG00000002853	TDP2	88	68.786	ENSCJAG00000006074	TDP2	99	69.333	Callithrix_jacchus
ENSGAGG00000002853	TDP2	88	68.208	ENSCJAG00000021963	-	96	68.208	Callithrix_jacchus
ENSGAGG00000002853	TDP2	90	66.384	ENSCAFG00000010428	TDP2	96	74.101	Canis_familiaris
ENSGAGG00000002853	TDP2	71	74.101	ENSCAFG00020009994	TDP2	96	74.101	Canis_lupus_dingo
ENSGAGG00000002853	TDP2	75	68.456	ENSCHIG00000015294	-	98	68.456	Capra_hircus
ENSGAGG00000002853	TDP2	79	68.608	ENSTSYG00000037199	TDP2	100	68.932	Carlito_syrichta
ENSGAGG00000002853	TDP2	87	71.176	ENSCPOG00000006390	TDP2	98	70.455	Cavia_porcellus
ENSGAGG00000002853	TDP2	88	69.653	ENSCCAG00000022734	TDP2	93	73.239	Cebus_capucinus
ENSGAGG00000002853	TDP2	87	69.501	ENSCATG00000022076	TDP2	94	71.777	Cercocebus_atys
ENSGAGG00000002853	TDP2	91	68.258	ENSCLAG00000002072	TDP2	99	68.258	Chinchilla_lanigera
ENSGAGG00000002853	TDP2	89	68.966	ENSCSAG00000007769	TDP2	97	68.966	Chlorocebus_sabaeus
ENSGAGG00000002853	TDP2	100	90.816	ENSCPBG00000006551	TDP2	100	90.816	Chrysemys_picta_bellii
ENSGAGG00000002853	TDP2	87	69.208	ENSCANG00000040122	TDP2	95	71.429	Colobus_angolensis_palliatus
ENSGAGG00000002853	TDP2	87	58.529	ENSCGRG00001000384	Tdp2	96	57.584	Cricetulus_griseus_chok1gshd
ENSGAGG00000002853	TDP2	87	57.522	ENSCGRG00000010250	Tdp2	99	54.945	Cricetulus_griseus_crigri
ENSGAGG00000002853	TDP2	86	54.131	ENSCVAG00000003114	tdp2b	95	54.131	Cyprinodon_variegatus
ENSGAGG00000002853	TDP2	63	51.012	ENSDARG00000069941	tdp2a	55	51.012	Danio_rerio
ENSGAGG00000002853	TDP2	87	52.044	ENSDARG00000035954	tdp2b	96	52.044	Danio_rerio
ENSGAGG00000002853	TDP2	87	68.391	ENSDNOG00000044082	TDP2	93	68.391	Dasypus_novemcinctus
ENSGAGG00000002853	TDP2	71	72.302	ENSETEG00000019096	TDP2	100	72.302	Echinops_telfairi
ENSGAGG00000002853	TDP2	65	51.181	ENSEBUG00000006535	tdp2a	59	51.181	Eptatretus_burgeri
ENSGAGG00000002853	TDP2	87	70.674	ENSEASG00005007656	TDP2	97	69.801	Equus_asinus_asinus
ENSGAGG00000002853	TDP2	87	70.381	ENSECAG00000014264	TDP2	100	68.232	Equus_caballus
ENSGAGG00000002853	TDP2	87	66.962	ENSEEUG00000010776	TDP2	97	66.189	Erinaceus_europaeus
ENSGAGG00000002853	TDP2	86	53.930	ENSELUG00000016449	tdp2b	96	53.930	Esox_lucius
ENSGAGG00000002853	TDP2	73	46.831	ENSELUG00000009321	tdp2a	84	49.071	Esox_lucius
ENSGAGG00000002853	TDP2	89	67.806	ENSFCAG00000025612	TDP2	97	67.806	Felis_catus
ENSGAGG00000002853	TDP2	88	68.696	ENSFALG00000004710	TDP2	97	69.429	Ficedula_albicollis
ENSGAGG00000002853	TDP2	72	72.438	ENSFDAG00000006512	TDP2	98	72.438	Fukomys_damarensis
ENSGAGG00000002853	TDP2	64	51.984	ENSFHEG00000013560	-	86	51.984	Fundulus_heteroclitus
ENSGAGG00000002853	TDP2	92	69.293	ENSGALG00000013637	TDP2	99	69.293	Gallus_gallus
ENSGAGG00000002853	TDP2	87	69.208	ENSGGOG00000014237	TDP2	94	71.429	Gorilla_gorilla
ENSGAGG00000002853	TDP2	86	54.416	ENSHBUG00000002714	tdp2b	95	54.416	Haplochromis_burtoni
ENSGAGG00000002853	TDP2	51	58.376	ENSHBUG00000005421	-	99	52.301	Haplochromis_burtoni
ENSGAGG00000002853	TDP2	90	67.898	ENSHGLG00000008655	TDP2	98	67.898	Heterocephalus_glaber_female
ENSGAGG00000002853	TDP2	90	68.182	ENSHGLG00100019087	TDP2	98	68.182	Heterocephalus_glaber_male
ENSGAGG00000002853	TDP2	88	52.419	ENSIPUG00000013691	tdp2b	97	52.419	Ictalurus_punctatus
ENSGAGG00000002853	TDP2	86	56.845	ENSJJAG00000021685	Tdp2	97	56.845	Jaculus_jaculus
ENSGAGG00000002853	TDP2	69	51.812	ENSKMAG00000015485	-	88	51.812	Kryptolebias_marmoratus
ENSGAGG00000002853	TDP2	93	60.106	ENSLACG00000008852	TDP2	99	60.106	Latimeria_chalumnae
ENSGAGG00000002853	TDP2	71	62.545	ENSLOCG00000005817	tdp2b	99	62.545	Lepisosteus_oculatus
ENSGAGG00000002853	TDP2	87	69.501	ENSLAFG00000002567	TDP2	99	68.661	Loxodonta_africana
ENSGAGG00000002853	TDP2	87	69.795	ENSMFAG00000045296	TDP2	97	69.253	Macaca_fascicularis
ENSGAGG00000002853	TDP2	87	69.795	ENSMMUG00000009803	TDP2	97	69.253	Macaca_mulatta
ENSGAGG00000002853	TDP2	87	69.795	ENSMNEG00000038003	TDP2	97	69.253	Macaca_nemestrina
ENSGAGG00000002853	TDP2	87	68.915	ENSMLEG00000028883	TDP2	94	71.777	Mandrillus_leucophaeus
ENSGAGG00000002853	TDP2	85	54.335	ENSMAMG00000013654	tdp2b	94	54.335	Mastacembelus_armatus
ENSGAGG00000002853	TDP2	61	49.793	ENSMZEG00005003980	-	78	49.793	Maylandia_zebra
ENSGAGG00000002853	TDP2	72	54.355	ENSMZEG00005004077	tdp2b	99	53.242	Maylandia_zebra
ENSGAGG00000002853	TDP2	70	50.000	ENSMZEG00005004126	tdp2b	93	50.000	Maylandia_zebra
ENSGAGG00000002853	TDP2	64	55.336	ENSMZEG00005004153	tdp2b	89	55.336	Maylandia_zebra
ENSGAGG00000002853	TDP2	63	53.441	ENSMZEG00005004055	tdp2b	82	53.441	Maylandia_zebra
ENSGAGG00000002853	TDP2	86	53.276	ENSMZEG00005003950	tdp2b	95	53.276	Maylandia_zebra
ENSGAGG00000002853	TDP2	64	50.593	ENSMZEG00005004103	tdp2b	84	50.593	Maylandia_zebra
ENSGAGG00000002853	TDP2	93	68.378	ENSMGAG00000008014	TDP2	99	68.378	Meleagris_gallopavo
ENSGAGG00000002853	TDP2	87	58.235	ENSMAUG00000014451	Tdp2	97	56.630	Mesocricetus_auratus
ENSGAGG00000002853	TDP2	87	69.679	ENSMICG00000000039	TDP2	96	73.404	Microcebus_murinus
ENSGAGG00000002853	TDP2	87	59.118	ENSMOCG00000002823	Tdp2	96	57.939	Microtus_ochrogaster
ENSGAGG00000002853	TDP2	78	61.442	ENSMODG00000011653	TDP2	95	63.782	Monodelphis_domestica
ENSGAGG00000002853	TDP2	72	51.748	ENSMALG00000005368	-	93	51.748	Monopterus_albus
ENSGAGG00000002853	TDP2	87	59.706	MGP_CAROLIEiJ_G0018354	Tdp2	95	58.101	Mus_caroli
ENSGAGG00000002853	TDP2	87	59.706	ENSMUSG00000035958	Tdp2	91	59.882	Mus_musculus
ENSGAGG00000002853	TDP2	87	57.941	MGP_PahariEiJ_G0019417	Tdp2	95	56.425	Mus_pahari
ENSGAGG00000002853	TDP2	96	55.733	MGP_SPRETEiJ_G0019220	Tdp2	99	55.733	Mus_spretus
ENSGAGG00000002853	TDP2	87	68.222	ENSMPUG00000004516	TDP2	99	66.947	Mustela_putorius_furo
ENSGAGG00000002853	TDP2	87	63.450	ENSMLUG00000013506	TDP2	95	63.450	Myotis_lucifugus
ENSGAGG00000002853	TDP2	99	52.645	ENSNGAG00000001375	Tdp2	99	52.645	Nannospalax_galili
ENSGAGG00000002853	TDP2	87	69.208	ENSNLEG00000002447	TDP2	97	69.096	Nomascus_leucogenys
ENSGAGG00000002853	TDP2	87	68.222	ENSOPRG00000016299	TDP2	98	68.222	Ochotona_princeps
ENSGAGG00000002853	TDP2	71	73.929	ENSODEG00000014018	TDP2	95	73.929	Octodon_degus
ENSGAGG00000002853	TDP2	88	67.052	ENSOCUG00000013773	TDP2	96	67.052	Oryctolagus_cuniculus
ENSGAGG00000002853	TDP2	67	50.000	ENSORLG00000001661	-	96	50.000	Oryzias_latipes
ENSGAGG00000002853	TDP2	69	49.265	ENSORLG00020004634	-	96	50.000	Oryzias_latipes_hni
ENSGAGG00000002853	TDP2	68	44.944	ENSORLG00015008190	-	97	44.944	Oryzias_latipes_hsok
ENSGAGG00000002853	TDP2	75	45.333	ENSOMEG00000015899	-	99	45.333	Oryzias_melastigma
ENSGAGG00000002853	TDP2	87	67.055	ENSOGAG00000025303	TDP2	93	67.055	Otolemur_garnettii
ENSGAGG00000002853	TDP2	87	69.795	ENSPPAG00000029023	TDP2	95	72.125	Pan_paniscus
ENSGAGG00000002853	TDP2	89	67.236	ENSPPRG00000015398	TDP2	97	67.236	Panthera_pardus
ENSGAGG00000002853	TDP2	71	71.942	ENSPTIG00000018574	TDP2	95	71.942	Panthera_tigris_altaica
ENSGAGG00000002853	TDP2	87	69.795	ENSPTRG00000017778	TDP2	94	72.125	Pan_troglodytes
ENSGAGG00000002853	TDP2	87	69.208	ENSPANG00000017590	TDP2	97	68.966	Papio_anubis
ENSGAGG00000002853	TDP2	88	54.696	ENSPKIG00000006483	tdp2b	98	54.696	Paramormyrops_kingsleyae
ENSGAGG00000002853	TDP2	71	89.855	ENSPSIG00000004948	TDP2	96	89.855	Pelodiscus_sinensis
ENSGAGG00000002853	TDP2	87	59.706	ENSPEMG00000001788	Tdp2	96	58.380	Peromyscus_maniculatus_bairdii
ENSGAGG00000002853	TDP2	64	47.191	ENSPMAG00000001570	tdp2b	97	47.940	Petromyzon_marinus
ENSGAGG00000002853	TDP2	87	66.276	ENSPCIG00000007316	TDP2	96	62.943	Phascolarctos_cinereus
ENSGAGG00000002853	TDP2	66	51.481	ENSPFOG00000017990	-	97	51.292	Poecilia_formosa
ENSGAGG00000002853	TDP2	64	52.569	ENSPLAG00000019439	-	80	52.569	Poecilia_latipinna
ENSGAGG00000002853	TDP2	64	53.360	ENSPMEG00000010824	-	85	53.360	Poecilia_mexicana
ENSGAGG00000002853	TDP2	87	68.328	ENSPPYG00000016282	TDP2	90	67.330	Pongo_abelii
ENSGAGG00000002853	TDP2	87	70.882	ENSPCOG00000021415	TDP2	98	74.460	Propithecus_coquereli
ENSGAGG00000002853	TDP2	86	52.991	ENSPNYG00000011532	tdp2b	95	52.991	Pundamilia_nyererei
ENSGAGG00000002853	TDP2	56	43.913	ENSPNYG00000001944	-	68	53.988	Pundamilia_nyererei
ENSGAGG00000002853	TDP2	64	50.558	ENSPNYG00000011504	tdp2b	88	50.558	Pundamilia_nyererei
ENSGAGG00000002853	TDP2	65	53.571	ENSPNAG00000022162	tdp2a	63	54.472	Pygocentrus_nattereri
ENSGAGG00000002853	TDP2	87	59.118	ENSRNOG00000018246	Tdp2	97	57.182	Rattus_norvegicus
ENSGAGG00000002853	TDP2	87	69.208	ENSRBIG00000037119	TDP2	94	71.831	Rhinopithecus_bieti
ENSGAGG00000002853	TDP2	87	68.915	ENSRROG00000005025	TDP2	94	71.479	Rhinopithecus_roxellana
ENSGAGG00000002853	TDP2	88	69.364	ENSSBOG00000028734	TDP2	91	73.741	Saimiri_boliviensis_boliviensis
ENSGAGG00000002853	TDP2	93	64.305	ENSSHAG00000002506	TDP2	97	64.305	Sarcophilus_harrisii
ENSGAGG00000002853	TDP2	65	53.150	ENSSFOG00015011322	-	71	53.150	Scleropages_formosus
ENSGAGG00000002853	TDP2	71	67.742	ENSSARG00000013547	TDP2	100	67.742	Sorex_araneus
ENSGAGG00000002853	TDP2	88	66.384	ENSSPUG00000008288	TDP2	98	65.928	Sphenodon_punctatus
ENSGAGG00000002853	TDP2	87	69.208	ENSSSCG00000001092	TDP2	97	68.376	Sus_scrofa
ENSGAGG00000002853	TDP2	66	76.448	ENSTGUG00000009035	TDP2	100	75.862	Taeniopygia_guttata
ENSGAGG00000002853	TDP2	66	53.008	ENSTRUG00000012218	-	92	53.008	Takifugu_rubripes
ENSGAGG00000002853	TDP2	88	54.039	ENSTRUG00000014347	tdp2b	98	54.039	Takifugu_rubripes
ENSGAGG00000002853	TDP2	65	53.516	ENSTNIG00000010260	TDP2	97	53.516	Tetraodon_nigroviridis
ENSGAGG00000002853	TDP2	89	52.909	ENSTNIG00000017792	tdp2b	98	52.909	Tetraodon_nigroviridis
ENSGAGG00000002853	TDP2	87	68.622	ENSTTRG00000016376	TDP2	97	68.091	Tursiops_truncatus
ENSGAGG00000002853	TDP2	91	64.045	ENSUAMG00000025939	TDP2	99	64.045	Ursus_americanus
ENSGAGG00000002853	TDP2	71	71.583	ENSUMAG00000020111	TDP2	93	71.583	Ursus_maritimus
ENSGAGG00000002853	TDP2	89	62.842	ENSXETG00000014826	tdp2	96	62.842	Xenopus_tropicalis
ENSGAGG00000002853	TDP2	66	52.471	ENSXCOG00000010778	-	72	52.471	Xiphophorus_couchianus
ENSGAGG00000002853	TDP2	66	52.852	ENSXMAG00000022252	-	75	52.852	Xiphophorus_maculatus