EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAGG00000003007 (Gene tree)
Gene ID
-
Gene Symbol
YTHDF1
Alias
C20orf21|FLJ20391
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Gopherus_agassizii
Status
putative
Strand
Minus strand
Length
21122 bases
Position
chrPPEB01002328.1:103641-124762
Accession
15867
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAGP00000003702YTHPF04146.157.9e-4211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAGT00000004283YTHDF1-2012176-ENSGAGP00000003702559 (aa)--
Gene Model
Click here to download ENSGAGG00000003007's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000003007's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAGG00000003007YTHDF19965.695ENSGAGG00000004897YTHDF29566.550
ENSGAGG00000003007YTHDF19768.717ENSGAGG00000003851YTHDF310068.983
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAGG00000003007YTHDF110089.464ENSG00000149658YTHDF110089.464Homo_sapiens
ENSGAGG00000003007YTHDF110076.976ENSAPOG00000010796YTHDF110077.148Acanthochromis_polyacanthus
ENSGAGG00000003007YTHDF19674.510ENSAPOG00000004358ythdf19774.427Acanthochromis_polyacanthus
ENSGAGG00000003007YTHDF19988.043ENSAMEG00000017323YTHDF19890.761Ailuropoda_melanoleuca
ENSGAGG00000003007YTHDF110075.910ENSACIG00000020083YTHDF110076.207Amphilophus_citrinellus
ENSGAGG00000003007YTHDF19671.199ENSACIG00000011264ythdf19772.212Amphilophus_citrinellus
ENSGAGG00000003007YTHDF19971.901ENSAOCG00000022251ythdf19874.733Amphiprion_ocellaris
ENSGAGG00000003007YTHDF110077.217ENSAOCG00000012567YTHDF110077.217Amphiprion_ocellaris
ENSGAGG00000003007YTHDF19671.695ENSAPEG00000021878ythdf19571.838Amphiprion_percula
ENSGAGG00000003007YTHDF110077.391ENSAPEG00000008750YTHDF110077.391Amphiprion_percula
ENSGAGG00000003007YTHDF19674.188ENSATEG00000023840ythdf19874.464Anabas_testudineus
ENSGAGG00000003007YTHDF110076.430ENSATEG00000005996YTHDF110076.076Anabas_testudineus
ENSGAGG00000003007YTHDF19997.830ENSAPLG00000005985YTHDF19997.830Anas_platyrhynchos
ENSGAGG00000003007YTHDF110092.679ENSACAG00000005560YTHDF110092.679Anolis_carolinensis
ENSGAGG00000003007YTHDF110075.357ENSANAG00000021022-10074.866Aotus_nancymaae
ENSGAGG00000003007YTHDF110088.571ENSANAG00000034786-10088.627Aotus_nancymaae
ENSGAGG00000003007YTHDF110076.522ENSACLG00000025518YTHDF110076.522Astatotilapia_calliptera
ENSGAGG00000003007YTHDF110086.429ENSBTAG00000010383YTHDF110086.429Bos_taurus
ENSGAGG00000003007YTHDF110088.750ENSCJAG00000010056YTHDF110088.750Callithrix_jacchus
ENSGAGG00000003007YTHDF19189.980ENSCAFG00000012772YTHDF19989.980Canis_familiaris
ENSGAGG00000003007YTHDF19189.980ENSCAFG00020001214YTHDF19989.980Canis_lupus_dingo
ENSGAGG00000003007YTHDF110085.536ENSCHIG00000026494YTHDF110085.536Capra_hircus
ENSGAGG00000003007YTHDF19987.814ENSTSYG00000033436YTHDF19987.814Carlito_syrichta
ENSGAGG00000003007YTHDF19787.293ENSCAPG00000002544YTHDF19487.523Cavia_aperea
ENSGAGG00000003007YTHDF110088.750ENSCPOG00000010202YTHDF110089.286Cavia_porcellus
ENSGAGG00000003007YTHDF110087.857ENSCCAG00000024650YTHDF110088.393Cebus_capucinus
ENSGAGG00000003007YTHDF110089.643ENSCATG00000033272YTHDF110089.643Cercocebus_atys
ENSGAGG00000003007YTHDF110086.988ENSCLAG00000005989YTHDF110089.840Chinchilla_lanigera
ENSGAGG00000003007YTHDF110089.643ENSCSAG00000016266YTHDF110089.643Chlorocebus_sabaeus
ENSGAGG00000003007YTHDF110099.106ENSCPBG00000027183YTHDF110099.106Chrysemys_picta_bellii
ENSGAGG00000003007YTHDF19990.036ENSCANG00000029082YTHDF19890.036Colobus_angolensis_palliatus
ENSGAGG00000003007YTHDF110090.536ENSCGRG00001016568Ythdf110090.536Cricetulus_griseus_chok1gshd
ENSGAGG00000003007YTHDF19890.563ENSCGRG00000009207Ythdf110090.563Cricetulus_griseus_crigri
ENSGAGG00000003007YTHDF19674.954ENSCSEG00000020623YTHDF19875.818Cynoglossus_semilaevis
ENSGAGG00000003007YTHDF19775.492ENSCVAG00000014378YTHDF19977.005Cyprinodon_variegatus
ENSGAGG00000003007YTHDF19971.631ENSCVAG00000017940ythdf19772.711Cyprinodon_variegatus
ENSGAGG00000003007YTHDF110071.845ENSDARG00000016447ythdf19574.446Danio_rerio
ENSGAGG00000003007YTHDF110088.393ENSDNOG00000043590YTHDF110088.393Dasypus_novemcinctus
ENSGAGG00000003007YTHDF19784.530ENSDORG00000002879Ythdf19487.293Dipodomys_ordii
ENSGAGG00000003007YTHDF17966.013ENSETEG00000017860-9768.657Echinops_telfairi
ENSGAGG00000003007YTHDF110088.036ENSEASG00005023186YTHDF110090.893Equus_asinus_asinus
ENSGAGG00000003007YTHDF19887.659ENSECAG00000019475YTHDF110090.784Equus_caballus
ENSGAGG00000003007YTHDF19290.310ENSEEUG00000007461YTHDF110090.310Erinaceus_europaeus
ENSGAGG00000003007YTHDF19972.804ENSELUG00000022768ythdf19974.873Esox_lucius
ENSGAGG00000003007YTHDF19474.908ENSELUG00000001906YTHDF19973.684Esox_lucius
ENSGAGG00000003007YTHDF110086.786ENSFCAG00000008917YTHDF110089.643Felis_catus
ENSGAGG00000003007YTHDF110097.138ENSFALG00000010463YTHDF110097.138Ficedula_albicollis
ENSGAGG00000003007YTHDF110087.857ENSFDAG00000019602YTHDF110088.571Fukomys_damarensis
ENSGAGG00000003007YTHDF19776.703ENSFHEG00000002540YTHDF19976.523Fundulus_heteroclitus
ENSGAGG00000003007YTHDF19973.002ENSFHEG00000023218ythdf19873.694Fundulus_heteroclitus
ENSGAGG00000003007YTHDF18692.308ENSGMOG00000019610ythdf19571.624Gadus_morhua
ENSGAGG00000003007YTHDF110097.504ENSGALG00000005745YTHDF110097.652Gallus_gallus
ENSGAGG00000003007YTHDF110073.970ENSGAFG00000021100YTHDF19977.061Gambusia_affinis
ENSGAGG00000003007YTHDF19672.632ENSGACG00000012014ythdf19572.569Gasterosteus_aculeatus
ENSGAGG00000003007YTHDF110075.507ENSGACG00000002613YTHDF110075.169Gasterosteus_aculeatus
ENSGAGG00000003007YTHDF110089.821ENSGGOG00000008340YTHDF110089.821Gorilla_gorilla
ENSGAGG00000003007YTHDF19672.154ENSHBUG00000011284ythdf19872.193Haplochromis_burtoni
ENSGAGG00000003007YTHDF110076.870ENSHBUG00000004875YTHDF110076.870Haplochromis_burtoni
ENSGAGG00000003007YTHDF110089.107ENSHGLG00000006585YTHDF110089.464Heterocephalus_glaber_female
ENSGAGG00000003007YTHDF110089.107ENSHGLG00100004683YTHDF110089.464Heterocephalus_glaber_male
ENSGAGG00000003007YTHDF19971.381ENSHCOG00000008866ythdf19872.175Hippocampus_comes
ENSGAGG00000003007YTHDF110071.890ENSHCOG00000011303YTHDF110076.296Hippocampus_comes
ENSGAGG00000003007YTHDF19777.960ENSIPUG00000000425Ythdf19877.960Ictalurus_punctatus
ENSGAGG00000003007YTHDF19989.130ENSSTOG00000023001YTHDF19989.130Ictidomys_tridecemlineatus
ENSGAGG00000003007YTHDF19890.926ENSJJAG00000013589Ythdf110090.926Jaculus_jaculus
ENSGAGG00000003007YTHDF19672.595ENSKMAG00000005595ythdf19872.321Kryptolebias_marmoratus
ENSGAGG00000003007YTHDF19775.801ENSKMAG00000017472YTHDF19976.241Kryptolebias_marmoratus
ENSGAGG00000003007YTHDF110075.514ENSLBEG00000012068YTHDF110073.833Labrus_bergylta
ENSGAGG00000003007YTHDF19673.370ENSLBEG00000014105ythdf19474.910Labrus_bergylta
ENSGAGG00000003007YTHDF19685.294ENSLACG00000014195YTHDF19687.640Latimeria_chalumnae
ENSGAGG00000003007YTHDF110079.828ENSLOCG00000005020ythdf19581.736Lepisosteus_oculatus
ENSGAGG00000003007YTHDF110089.286ENSLAFG00000008884YTHDF110089.286Loxodonta_africana
ENSGAGG00000003007YTHDF110089.643ENSMFAG00000042868YTHDF110089.643Macaca_fascicularis
ENSGAGG00000003007YTHDF110089.643ENSMMUG00000009227YTHDF110089.643Macaca_mulatta
ENSGAGG00000003007YTHDF110089.643ENSMNEG00000030851YTHDF110089.643Macaca_nemestrina
ENSGAGG00000003007YTHDF19889.837ENSMLEG00000009252YTHDF110089.837Mandrillus_leucophaeus
ENSGAGG00000003007YTHDF19672.451ENSMAMG00000024255ythdf19972.949Mastacembelus_armatus
ENSGAGG00000003007YTHDF110076.307ENSMAMG00000011072YTHDF110076.132Mastacembelus_armatus
ENSGAGG00000003007YTHDF110076.870ENSMZEG00005023596YTHDF110076.870Maylandia_zebra
ENSGAGG00000003007YTHDF19673.310ENSMZEG00005026397ythdf19873.333Maylandia_zebra
ENSGAGG00000003007YTHDF19996.601ENSMGAG00000006139YTHDF19996.601Meleagris_gallopavo
ENSGAGG00000003007YTHDF110090.893ENSMAUG00000017660Ythdf110090.893Mesocricetus_auratus
ENSGAGG00000003007YTHDF110089.464ENSMICG00000032266YTHDF110089.464Microcebus_murinus
ENSGAGG00000003007YTHDF110090.357ENSMOCG00000013573Ythdf110090.357Microtus_ochrogaster
ENSGAGG00000003007YTHDF19670.256ENSMMOG00000017500ythdf19671.404Mola_mola
ENSGAGG00000003007YTHDF19971.947ENSMMOG00000020467YTHDF19473.595Mola_mola
ENSGAGG00000003007YTHDF19194.521ENSMODG00000016842YTHDF110094.716Monodelphis_domestica
ENSGAGG00000003007YTHDF19671.964ENSMALG00000015672ythdf19673.002Monopterus_albus
ENSGAGG00000003007YTHDF110076.950ENSMALG00000022209YTHDF110076.817Monopterus_albus
ENSGAGG00000003007YTHDF110090.357MGP_CAROLIEiJ_G0024790Ythdf110090.357Mus_caroli
ENSGAGG00000003007YTHDF110090.357ENSMUSG00000038848Ythdf110090.357Mus_musculus
ENSGAGG00000003007YTHDF110090.357MGP_PahariEiJ_G0026237Ythdf110090.357Mus_pahari
ENSGAGG00000003007YTHDF110090.357MGP_SPRETEiJ_G0025715Ythdf110090.357Mus_spretus
ENSGAGG00000003007YTHDF19184.479ENSMPUG00000008111YTHDF110085.294Mustela_putorius_furo
ENSGAGG00000003007YTHDF19789.319ENSMLUG00000002241YTHDF19689.319Myotis_lucifugus
ENSGAGG00000003007YTHDF110090.893ENSNGAG00000000334Ythdf110090.893Nannospalax_galili
ENSGAGG00000003007YTHDF110076.870ENSNBRG00000015321YTHDF110076.870Neolamprologus_brichardi
ENSGAGG00000003007YTHDF19970.639ENSNBRG00000008213ythdf19771.186Neolamprologus_brichardi
ENSGAGG00000003007YTHDF19576.460ENSOPRG00000001758-9876.091Ochotona_princeps
ENSGAGG00000003007YTHDF110085.740ENSODEG00000004380-10088.592Octodon_degus
ENSGAGG00000003007YTHDF110070.973ENSODEG00000000074-10073.805Octodon_degus
ENSGAGG00000003007YTHDF19671.404ENSONIG00000016799ythdf19771.624Oreochromis_niloticus
ENSGAGG00000003007YTHDF110094.831ENSOANG00000003723YTHDF110095.900Ornithorhynchus_anatinus
ENSGAGG00000003007YTHDF110077.402ENSOCUG00000012780YTHDF110077.046Oryctolagus_cuniculus
ENSGAGG00000003007YTHDF19671.503ENSORLG00000014665YTHDF19571.795Oryzias_latipes
ENSGAGG00000003007YTHDF19775.627ENSORLG00000009739YTHDF19975.398Oryzias_latipes
ENSGAGG00000003007YTHDF19776.588ENSORLG00020001332YTHDF19976.344Oryzias_latipes_hni
ENSGAGG00000003007YTHDF19671.799ENSORLG00020000307ythdf19572.089Oryzias_latipes_hni
ENSGAGG00000003007YTHDF19671.799ENSORLG00015006302ythdf19572.089Oryzias_latipes_hsok
ENSGAGG00000003007YTHDF110073.588ENSORLG00015018321YTHDF110074.086Oryzias_latipes_hsok
ENSGAGG00000003007YTHDF19673.333ENSOMEG00000002941YTHDF19873.929Oryzias_melastigma
ENSGAGG00000003007YTHDF110071.916ENSOMEG00000011843YTHDF19573.639Oryzias_melastigma
ENSGAGG00000003007YTHDF110087.500ENSOGAG00000000480YTHDF110087.500Otolemur_garnettii
ENSGAGG00000003007YTHDF19981.851ENSOARG00000011639YTHDF19882.790Ovis_aries
ENSGAGG00000003007YTHDF19990.036ENSPPAG00000023277YTHDF110090.036Pan_paniscus
ENSGAGG00000003007YTHDF110086.964ENSPPRG00000020805YTHDF110089.821Panthera_pardus
ENSGAGG00000003007YTHDF19979.855ENSPTIG00000017355YTHDF19980.762Panthera_tigris_altaica
ENSGAGG00000003007YTHDF110089.821ENSPTRG00000013730YTHDF110089.821Pan_troglodytes
ENSGAGG00000003007YTHDF110089.643ENSPANG00000021472YTHDF110089.643Papio_anubis
ENSGAGG00000003007YTHDF110070.105ENSPKIG00000005427ythdf110071.826Paramormyrops_kingsleyae
ENSGAGG00000003007YTHDF19973.665ENSPKIG00000005026YTHDF19774.368Paramormyrops_kingsleyae
ENSGAGG00000003007YTHDF19797.802ENSPSIG00000005529YTHDF19797.802Pelodiscus_sinensis
ENSGAGG00000003007YTHDF19774.271ENSPMGG00000009101YTHDF19975.086Periophthalmus_magnuspinnatus
ENSGAGG00000003007YTHDF19371.326ENSPMGG00000015328ythdf19671.329Periophthalmus_magnuspinnatus
ENSGAGG00000003007YTHDF19890.926ENSPEMG00000020199Ythdf110090.926Peromyscus_maniculatus_bairdii
ENSGAGG00000003007YTHDF19993.863ENSPCIG00000017170YTHDF110094.912Phascolarctos_cinereus
ENSGAGG00000003007YTHDF19971.141ENSPFOG00000005405ythdf19571.773Poecilia_formosa
ENSGAGG00000003007YTHDF19973.814ENSPLAG00000006653ythdf19873.975Poecilia_latipinna
ENSGAGG00000003007YTHDF110071.865ENSPLAG00000006298YTHDF19573.649Poecilia_latipinna
ENSGAGG00000003007YTHDF110075.087ENSPMEG00000020969-10075.478Poecilia_mexicana
ENSGAGG00000003007YTHDF19973.063ENSPMEG00000023753ythdf19872.906Poecilia_mexicana
ENSGAGG00000003007YTHDF19972.840ENSPREG00000002173ythdf19873.393Poecilia_reticulata
ENSGAGG00000003007YTHDF19771.358ENSPREG00000017662YTHDF19373.693Poecilia_reticulata
ENSGAGG00000003007YTHDF18695.025ENSPPYG00000011226YTHDF110095.025Pongo_abelii
ENSGAGG00000003007YTHDF18983.871ENSPCAG00000002452YTHDF19883.800Procavia_capensis
ENSGAGG00000003007YTHDF110089.821ENSPCOG00000025969YTHDF110089.821Propithecus_coquereli
ENSGAGG00000003007YTHDF19880.545ENSPVAG00000017568YTHDF19881.331Pteropus_vampyrus
ENSGAGG00000003007YTHDF110076.870ENSPNYG00000002266YTHDF110076.870Pundamilia_nyererei
ENSGAGG00000003007YTHDF19673.310ENSPNYG00000014007ythdf19873.333Pundamilia_nyererei
ENSGAGG00000003007YTHDF110071.313ENSPNAG00000012447ythdf110075.261Pygocentrus_nattereri
ENSGAGG00000003007YTHDF110090.000ENSRNOG00000027015Ythdf110090.000Rattus_norvegicus
ENSGAGG00000003007YTHDF110088.393ENSRBIG00000044959YTHDF110088.393Rhinopithecus_bieti
ENSGAGG00000003007YTHDF110088.214ENSRROG00000033014YTHDF110088.214Rhinopithecus_roxellana
ENSGAGG00000003007YTHDF19786.740ENSSBOG00000027278YTHDF110086.471Saimiri_boliviensis_boliviensis
ENSGAGG00000003007YTHDF19993.190ENSSHAG00000010430YTHDF18994.086Sarcophilus_harrisii
ENSGAGG00000003007YTHDF110075.254ENSSFOG00015000284ythdf110075.635Scleropages_formosus
ENSGAGG00000003007YTHDF19580.567ENSSMAG00000007635YTHDF19475.485Scophthalmus_maximus
ENSGAGG00000003007YTHDF17482.099ENSSMAG00000013715ythdf19466.468Scophthalmus_maximus
ENSGAGG00000003007YTHDF19977.208ENSSDUG00000015823YTHDF19976.977Seriola_dumerili
ENSGAGG00000003007YTHDF19674.153ENSSDUG00000000435ythdf19674.468Seriola_dumerili
ENSGAGG00000003007YTHDF110070.932ENSSLDG00000001054YTHDF110073.989Seriola_lalandi_dorsalis
ENSGAGG00000003007YTHDF19671.111ENSSLDG00000024948ythdf19671.066Seriola_lalandi_dorsalis
ENSGAGG00000003007YTHDF19196.477ENSSPUG00000015143YTHDF110096.477Sphenodon_punctatus
ENSGAGG00000003007YTHDF19670.777ENSSPAG00000014989ythdf19671.022Stegastes_partitus
ENSGAGG00000003007YTHDF110075.945ENSSPAG00000003666YTHDF110075.945Stegastes_partitus
ENSGAGG00000003007YTHDF110085.179ENSSSCG00000040086YTHDF110086.453Sus_scrofa
ENSGAGG00000003007YTHDF19997.288ENSTGUG00000007565YTHDF110097.288Taeniopygia_guttata
ENSGAGG00000003007YTHDF19972.941ENSTRUG00000004288ythdf19871.939Takifugu_rubripes
ENSGAGG00000003007YTHDF19672.466ENSTRUG00000005049YTHDF19873.401Takifugu_rubripes
ENSGAGG00000003007YTHDF19974.165ENSTNIG00000012490ythdf19975.044Tetraodon_nigroviridis
ENSGAGG00000003007YTHDF110074.869ENSTNIG00000003975YTHDF110075.261Tetraodon_nigroviridis
ENSGAGG00000003007YTHDF19983.363ENSTTRG00000001804YTHDF19885.294Tursiops_truncatus
ENSGAGG00000003007YTHDF19788.214ENSUAMG00000011021YTHDF110090.588Ursus_americanus
ENSGAGG00000003007YTHDF19187.451ENSUMAG00000022290YTHDF110090.392Ursus_maritimus
ENSGAGG00000003007YTHDF19189.980ENSVVUG00000015275YTHDF19989.980Vulpes_vulpes
ENSGAGG00000003007YTHDF19686.716ENSXETG00000027086ythdf19487.453Xenopus_tropicalis
ENSGAGG00000003007YTHDF19771.854ENSXCOG00000008115YTHDF19473.345Xiphophorus_couchianus
ENSGAGG00000003007YTHDF19673.273ENSXCOG00000002490ythdf19373.849Xiphophorus_couchianus
ENSGAGG00000003007YTHDF19971.504ENSXMAG00000008525ythdf19772.064Xiphophorus_maculatus
ENSGAGG00000003007YTHDF19776.619ENSXMAG00000015644YTHDF19976.732Xiphophorus_maculatus

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